July 2007 Archives by date
Starting: Sun Jul 1 08:58:23 CEST 2007
Ending: Tue Jul 31 20:58:56 CEST 2007
Messages: 451
- [BioC] hyperGTest(GOstats) result question
burak kutlu
- [BioC] ReadAffy() Problem
ssls sddd
- [BioC] ReadAffy() Problem
smohapat at vbi.vt.edu
- [BioC] about two way anova on time and treatment
Ana Conesa
- [BioC] goTools: ontoCompare question
davidl at unr.nevada.edu
- [BioC] Questions about Simpleaffy Session in R & BioConductor Manual
ssls sddd
- [BioC] CGH analysis warning messages
Daniel Brewer
- [BioC] Biomart with human genes NCBI 35
marco zucchelli
- [BioC] hgu133a and gnGNF1Ba
Robert Castelo
- [BioC] hgu133a and gnGNF1Ba
Cei Abreu-Goodger
- [BioC] Combining arrays arrays from different tissues and different labs.
marco zucchelli
- [BioC] These are some of the things to love about Caesars Palace Las Vegas, and there are plenty more.
Carrie Slaughter
- [BioC] limma normalizeWithinArrays method="control"
Al Ivens
- [BioC] Biomart with human genes NCBI 35
Durinck, Steffen (NIH/NCI) [F]
- [BioC] What is the best way to eliminate non-variants from set of arrays?
Ruppert Valentino
- [BioC] entry-level
Floy
- [BioC] SAM algorithm S0 value calculation
jaydeep chovatia
- [BioC] GSEA, HyperGeo vs gene-centric analysis
arne.mueller at novartis.com
- [BioC] BSgenome and R memory use
Paul Leo
- [BioC] Asbjorn Lonvig has been a Premiere Portfolio artist at absolutearts.
Sanders X. Robin
- [BioC] SAM algorithm S0 value calculation
Stephen Henderson
- [BioC] BSgenome and R memory use
Martin Morgan
- [BioC] BSgenome and R memory use
Paul Leo
- [BioC] SAM algorithm S0 value calculation
James W. MacDonald
- [BioC] GSEA, HyperGeo vs gene-centric analysis
Weiwei Shi
- [BioC] what test?
simonegri at alice.it
- [BioC] oligo package for R-2.4.1
Tae-Hoon Chung
- [BioC] oligo package for R-2.4.1
Benilton Carvalho
- [BioC] GEOquery on rawdata and processed data ?
Alex Tsoi
- [BioC] oligo package for R-2.4.1
Kasper Daniel Hansen
- [BioC] GEOquery on rawdata and processed data ?
Alex Tsoi
- [BioC] GEOquery on rawdata and processed data ?
Saroj Mohapatra
- [BioC] GEOquery on rawdata and processed data ?
Jenny Drnevich
- [BioC] GEOquery on rawdata and processed data ?
Sean Davis
- [BioC] GEOquery on rawdata and processed data ?
Alex Tsoi
- [BioC] GEOquery on rawdata and processed data ?
Sean Davis
- [BioC] Problem with tkWidgets with 2.5.0 on Mac OS Tiger
John Cornell
- [BioC] Problem with tkWidgets with 2.5.0 on Mac OS Tiger
Robert Gentleman
- [BioC] Problem with tkWidgets with 2.5.0 on Mac OS Tiger
Martin Morgan
- [BioC] marray layout
Vanessa Vermeirssen
- [BioC] combineAffyBatch
Kauer Maximilian Otto
- [BioC] Regressions in multtest
Benjamin Otto
- [BioC] Problem creating a contrast matrix
Siarhei Manakou
- [BioC] Problem creating a contrast matrix
Siarhei Manakou
- [BioC] Problem creating a contrast matrix
Siarhei Manakou
- [BioC] Problem creating a contrast matrix
Siarhei Manakou
- [BioC] Problem creating a contrast matrix
Siarhei Manakou
- [BioC] Problem creating a contrast matrix
Siarhei Manakou
- [BioC] Problem creating a contrast matrix
Siarhei Manakou
- [BioC] Problem creating a contrast matrix
Artur Veloso
- [BioC] aCGH package analysis - duplicate spot averaging problem
Ian Roberts
- [BioC] combineAffyBatch
Martin Morgan
- [BioC] CGH analysis warning messages
Ian Roberts
- [BioC] Problem creating a contrast matrix
Jim MacDonald
- [BioC] problems reading Illumina files using BeadExplorer
Keon Myung Lee
- [BioC] journal.yoaqcq.pdf
Austin Dora
- [BioC] marray layout
Jean Yee Hwa Yang
- [BioC] BSgenome and R memory use
Herve Pages
- [BioC] nsFilter error
Thomas Lo
- [BioC] exonmap/xmap database install problem
Johannes Rainer
- [BioC] exonmap/xmap database install problem
Crispin Miller
- [BioC] Converting Seglist to segments file
Daniel Brewer
- [BioC] gcrma error? - linked to makeProbePackage ?
Benoit Ballester
- [BioC] Manufacturer ids in lumiHumanV1
Benjamin Otto
- [BioC] how to see the content of a bioconductor function?
carol white
- [BioC] how to see the content of a bioconductor function?
Benjamin Otto
- [BioC] Manufacturer ids in lumiHumanV1
Sean Davis
- [BioC] exonmap/xmap database install problem
Sean Davis
- [BioC] exonmap/xmap database install problem
Benoit Ballester
- [BioC] AnnBuilder: ABPkgBuilder gives missing GO and NAs in ACCNUM
Chuen Seng, Tan
- [BioC] how to see the content of a bioconductor function?
James W. MacDonald
- [BioC] Nimblegen analysis using Bioconductor
Rene Dreos (JIC)
- [BioC] gcrma error? - linked to makeProbePackage ?
James W. MacDonald
- [BioC] about two way anova on time and treatment
James Anderson
- [BioC] AnnBuilder: ABPkgBuilder gives missing GO and NAs in ACCNUM
Nianhua Li
- [BioC] Nimblegen analysis using Bioconductor
Joern Toedling
- [BioC] gcrma error? - linked to makeProbePackage ?
Benoit Ballester
- [BioC] Comparison of your beadarray package with Illumina's analysis software
Mark Dunning
- [BioC] k-fold cross validation with xval
carol white
- [BioC] gcrma error? - linked to makeProbePackage ?
Kasper Daniel Hansen
- [BioC] Nimblegen analysis using Bioconductor
J.delasHeras at ed.ac.uk
- [BioC] Bioconductor Chicago 2007
Denise Scholtens
- [BioC] Affystart function in Affycoretools
Sachin Mathur
- [BioC] Affystart function in Affycoretools
James W. MacDonald
- [BioC] normalizeBetweenArrays
Lev Soinov
- [BioC] How to combine Affymetrix and Illumina Arrays
ssls sddd
- [BioC] ROC
yoo hoo
- [BioC] How to combine Affymetrix and Illumina Arrays
Matthias Kohl
- [BioC] exonmap/xmap database install problem
Johannes Rainer
- [BioC] Announcement-VPCZOALHTGRBY.pdf
shed
- [BioC] Pvalue permutation of Linear regression
Benjamin Otto
- [BioC] gcrma error? - linked to makeProbePackage ?
Benoit Ballester
- [BioC] gcrma error? - linked to makeProbePackage ?
Cei Abreu-Goodger
- [BioC] gcrma error? - linked to makeProbePackage ?
Benoit Ballester
- [BioC] gcrma error? - linked to makeProbePackage ?
Cei Abreu-Goodger
- [BioC] gcrma error? - linked to makeProbePackage ?
Benoit Ballester
- [BioC] gcrma error? - linked to makeProbePackage ?
James W. MacDonald
- [BioC] Manufacturer ids in lumiHumanV1
Pan Du
- [BioC] technical vs biological replication in real-time
r.athanasiadou
- [BioC] Problem with ArrayQuality Package version 1.12
Peter White
- [BioC] AnnBuilder: ABPkgBuilder gives missing GO and NAs in ACCNUM
Marc Carlson
- [BioC] Problem with ArrayQuality Package version 1.12
Paquet, Agnes
- [BioC] technical vs biological replication in real-time
Juan Pedro Steibel
- [BioC] technical vs biological replication in real-time
Juan Pedro Steibel
- [BioC] Problem with ArrayQuality Package version 1.12
Peter White
- [BioC] Problem with ArrayQuality Package version 1.12
Paquet, Agnes
- [BioC] Problem with ArrayQuality Package version 1.12
Peter White
- [BioC] Problem with ArrayQuality Package version 1.12
Martin Morgan
- [BioC] Problem with ArrayQuality Package version 1.12
Martin Morgan
- [BioC] Problem with ArrayQuality Package version 1.12
Peter White
- [BioC] Tools for Combining Affy and aCGH data
Tarun Nayar
- [BioC] Problem with ArrayQuality Package version 1.12
Martin Morgan
- [BioC] Problem with ArrayQuality Package version 1.12
Paquet, Agnes
- [BioC] AnnBuilder: ABPkgBuilder gives missing GO and NAs in ACCNUM
Marc Carlson
- [BioC] Tools for Combining Affy and aCGH data
Sean Davis
- [BioC] how to get gene information?
Roger Liu
- [BioC] how to get gene information?
Sean Davis
- [BioC] Tools for Combining Affy and aCGH data
Pierre Neuvial
- [BioC] how to revert to an older limma version?
Maya Bercovich
- [BioC] how to revert to an older limma version?
Kasper Daniel Hansen
- [BioC] how to get gene information?
Roger Liu
- [BioC] how to revert to an older limma version?
Marcus Davy
- [BioC] Identification of unannotated transcripts using Arabidopsis 1.0R Tiling Arrays
Pia Sappl
- [BioC] Questions regarding lumi
Ingrid H. G. Østensen
- [BioC] Tools for Combining Affy and aCGH data
Benjamin Otto
- [BioC] how to revert to an older limma version?
Maya Bercovich
- [BioC] Identification of unannotated transcripts using Arabidopsis 1.0R Tiling Arrays
Sean Davis
- [BioC] Sequence output formatting
Daniel Brewer
- [BioC] Sequence output formatting
J.delasHeras at ed.ac.uk
- [BioC] similar limma's contrast.fit function for lme (mixed effect model) object
shirley zhang
- [BioC] Sequence output formatting
Richard Pearson
- [BioC] Sequence output formatting
Tobias Straub
- [BioC] Sequence output formatting
Tobias Straub
- [BioC] Problems with MANOR and RSPerl
James Morris
- [BioC] how to revert to an older limma version?
Seth Falcon
- [BioC] nsFilter error
Seth Falcon
- [BioC] hyperGTest(GOstats) result question
Seth Falcon
- [BioC] nsFilter error
Thomas Lo
- [BioC] Questions regarding lumi
Pan Du
- [BioC] Expected score values in SAM algorithm
jaydeep chovatia
- [BioC] RMAGEML and JVM
Michaela Gündel
- [BioC] how to revert to an older limma version?
Maya Bercovich
- [BioC] Identification of unannotated transcripts using Arabidopsis 1.0R Tiling Arrays
Wolfgang Huber
- [BioC] RMAGEML and JVM
Wolfgang Huber
- [BioC] RMAGEML and JVM
Michaela Gündel
- [BioC] Questions regarding lumi
Ingrid H. G. Østensen
- [BioC] RMAGEML and JVM
Wolfgang Huber
- [BioC] RMAGEML and JVM
Michaela Gündel
- [BioC] how to revert to an older limma version?
Martin Morgan
- [BioC] Biostatistician/Statistical Programmer/Data Analyst
Holden-Wiltse, Jeanne
- [BioC] RMAGEML and JVM
Martin Morgan
- [BioC] Problems with MANOR and RSPerl
Seth Falcon
- [BioC] Peculiar behaviour of normalize.quantiles (in affy, preprocessCore) if there are NA data
Wolfgang Huber
- [BioC] Using current GO data with Bioconductor
Peter Robinson
- [BioC] nsFilter error
Martin Morgan
- [BioC] Bioconductor training at BioC2007
Seth Falcon
- [BioC] Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
Michael Parisi
- [BioC] Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
Seth Falcon
- [BioC] Peculiar behaviour of normalize.quantiles (in affy, preprocessCore) if there are NA data
Ben Bolstad
- [BioC] hyperGTest(GOstats) result question
burak kutlu
- [BioC] displaying heatmap with gene names instead of Affy probes
Ruppert Valentino
- [BioC] displaying heatmap with gene names instead of Affy probes
Sean Davis
- [BioC] Nimblegen chip analysis
Rene Dreos (JIC)
- [BioC] lumiT VST error
William Mifsud
- [BioC] Nimblegen chip analysis
Benilton Carvalho
- [BioC] Annalyzing replicates in the Agilent chip 4 x44 with limma
Ester Feldmesser
- [BioC] Nimblegen chip analysis
Todd Richmond
- [BioC] hyperGTest(GOstats) result question
Seth Falcon
- [BioC] Using current GO data with Bioconductor
Marc Carlson
- [BioC] how to revert to an older limma version?
Martin Morgan
- [BioC] nsFilter error
Thomas Lo
- [BioC] displayTIFFImage funtion in beadarray package
Sebastien Gerega
- [BioC] displayTIFFImage funtion in beadarray package
Jarno Tuimala
- [BioC] RMAGEML and JVM
Michaela Gündel
- [BioC] displayTIFFImage funtion in beadarray package
Matt Ritchie
- [BioC] Outputting dendrogram with large numbers of genes without losing resolution
Marie Chehani Alles
- [BioC] RMAGEML and JVM
Martin Morgan
- [BioC] Outputting dendrogram with large numbers of genes without losing resolution
Sean Davis
- [BioC] how to revert to an older limma version?
Maya Bercovich
- [BioC] lumiT VST error
Pan Du
- [BioC] filtering
Lev Soinov
- [BioC] lumiT VST error
William Mifsud
- [BioC] Limma, SAM and Fold Change Calculation
Peter White
- [BioC] lumiT VST error
Pan Du
- [BioC] Return of "I'm sorry, I do not know about chip type (foo)"
Dave Jacoby
- [BioC] filtering
Jenny Drnevich
- [BioC] Source codes of affy, gcrma and quantiles
Gunther Höning
- [BioC] Outputting dendrogram with large numbers of genes without losing resolution
Thomas Girke
- [BioC] Sample size calculation - microarray experiemnt
Sharon
- [BioC] bioinformatics position at Harvard Medical School
Wall, Dennis Paul
- [BioC] Source codes of affy, gcrma and quantiles
Wolfgang Huber
- [BioC] filtering
Lev Soinov
- [BioC] Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
Alex
- [BioC] Sample size calculation - microarray experiemnt
Claus-Dieter Mayer
- [BioC] clumsy coercive
Emm Velazquez
- [BioC] how to revert to an older limma version?
Martin Morgan
- [BioC] Annalyzing replicates in the Agilent chip 4 x44 with limma
Gordon Smyth
- [BioC] displayTIFFImage funtion in beadarray package
Sebastien Gerega
- [BioC] filtering
Lev Soinov
- [BioC] lumiT VST error
William Mifsud
- [BioC] Tools for Combining Affy and aCGH data
Vincent Carey 525-2265
- [BioC] JOB: 5-year research positions in Bioinformatics/Biomathematics. Faculty of Sciences of the University of Porto
Joaquim Fernando Pinto da Costa
- [BioC] Outputting dendrogram with large numbers of genes, without losing resolution
Aedin Culhane
- [BioC] peddle
Jack Whaley
- [BioC] Limma, SAM and Fold Change Calculation
Gordon K Smyth
- [BioC] LIMMA: statistical/methodical question
Mayra Eduardoff
- [BioC] LIMMA
Lev Soinov
- [BioC] LIMMA
Lev Soinov
- [BioC] filtering
J.delasHeras at ed.ac.uk
- [BioC] Limma, SAM and Fold Change Calculation
Holger Schwender
- [BioC] filtering
J.delasHeras at ed.ac.uk
- [BioC] Limma, SAM and Fold Change Calculation
Peter White
- [BioC] filtering
drnevich at uiuc.edu
- [BioC] filtering
Lev Soinov
- [BioC] filtering
Lev Soinov
- [BioC] displayTIFFImage funtion in beadarray package
Matt Ritchie
- [BioC] filtering
J.delasHeras at ed.ac.uk
- [BioC] filtering
Lev Soinov
- [BioC] filtering
J.delasHeras at ed.ac.uk
- [BioC] filtering
Lev Soinov
- [BioC] filtering
J.delasHeras at ed.ac.uk
- [BioC] LIMMA
Gordon Smyth
- [BioC] filtering
Lev Soinov
- [BioC] Limma, SAM and Fold Change Calculation
Gordon Smyth
- [BioC] Limma, SAM and Fold Change Calculation
Gordon Smyth
- [BioC] What if your service layer is written with Spring and Hibernate?
Theodore
- [BioC] filtering
J.delasHeras at ed.ac.uk
- [BioC] filtering
Lev Soinov
- [BioC] The above Feelgood Formula enshrines the common philosophy that the better you treat people, the better they will work.
Neddy
- [BioC] hyperGTest - GO node universe?
Edward Bolanger
- [BioC] R/limma Help
Alessandro Fazio
- [BioC] affyPLM - cant plot chip pseudo image
Rebecca
- [BioC] affyPLM - cant plot chip pseudo image
James W. MacDonald
- [BioC] Annalyzing replicates in the Agilent chip 4 x44 with limma
Francois Pepin
- [BioC] affyPLM - cant plot chip pseudo image
Rebecca
- [BioC] affyPLM - cant plot chip pseudo image
James W. MacDonald
- [BioC] How to use KEGG in Bioconductor
mousheng xu
- [BioC] How to use KEGG in Bioconductor
John Zhang
- [BioC] Duplicate Correlation through Blocks
Scott Reagan Franklin
- [BioC] Duplicate Correlation through Blocks
Franklin, Scott
- [BioC] Duplicate Correlation through Blocks
Francois Pepin
- [BioC] how to use limma on this format
Weiwei Shi
- [BioC] Imputation problem in aCGH
Benjamin Otto
- [BioC] Removing libraries or using a particular function
Daniel Brewer
- [BioC] Removing libraries or using a particular function
Mark Robinson
- [BioC] Removing libraries or using a particular function
Jarno Tuimala
- [BioC] MAANOVA help
Alessandro Fazio
- [BioC] affyPLM - cant plot chip pseudo image
Rebecca
- [BioC] Nimblegen analysis using oligo
Rene Dreos (JIC)
- [BioC] how to use limma on this format
smohapat at vbi.vt.edu
- [BioC] Removing libraries or using a particular function
Wolfgang Huber
- [BioC] biomaRt get exon intron structure of a transcrit
Johannes Rainer
- [BioC] affyPLM - cant plot chip pseudo image
James W. MacDonald
- [BioC] Removing libraries or using a particular function
Seth Falcon
- [BioC] hyperGTest - GO node universe?
Seth Falcon
- [BioC] how to use limma on this format
Weiwei Shi
- [BioC] how to use limma on this format
Sean Davis
- [BioC] how to use limma on this format
Weiwei Shi
- [BioC] Transcription factor genes
Tae-Hoon Chung
- [BioC] how to use limma on this format
J.delasHeras at ed.ac.uk
- [BioC] how to use limma on this format
Weiwei Shi
- [BioC] how to use limma on this format
Sean Davis
- [BioC] annotation files for agilent: a bit off-topic
Weiwei Shi
- [BioC] Biostatistician Position: UMass Medical School
Lapointe, David
- [BioC] annotation files for agilent: a bit off-topic
Sean Davis
- [BioC] Limma, SAM and Fold Change Calculation
Holger Schwender
- [BioC] annotation files for agilent: a bit off-topic
Weiwei Shi
- [BioC] annotation files for agilent: a bit off-topic
Francois Pepin
- [BioC] annotation files for agilent: a bit off-topic
Weiwei Shi
- [BioC] Transcription factor genes
Marc Carlson
- [BioC] annotation files for agilent: a bit off-topic
Francois Pepin
- [BioC] Help in biomaRt
Alex Tsoi
- [BioC] Tr: RE : Help in biomaRt
el mousselly antra
- [BioC] Help in biomaRt
Hooiveld, Guido
- [BioC] GOHyperG stats question
Suraj Menon
- [BioC] GOHyperG stats question
James W. MacDonald
- [BioC] question on limma package
el mousselly antra
- [BioC] annotation files for agilent: a bit off-topic
John Zhang
- [BioC] question on limma package
Richard Friedman
- [BioC] question on limma package
J.delasHeras at ed.ac.uk
- [BioC] RE : Re: question on limma package
Richard Friedman
- [BioC] Agilent annotation package
Yad Ghavi-Helm
- [BioC] question on limma package/PCR validation
Claus-Dieter Mayer
- [BioC] annotation files for agilent: a bit off-topic
Gaj Stan (BIGCAT)
- [BioC] Transcription factor genes
Khan, Anar
- [BioC] question about RMA's background adjustment...
Jenny Drnevich
- [BioC] analysis of HG_U95A vs. HG_U95Av2
Alex Tsoi
- [BioC] annotation files for agilent: a bit off-topic
Weiwei Shi
- [BioC] analysis of HG_U95A vs. HG_U95Av2
Marc Carlson
- [BioC] analysis of HG_U95A vs. HG_U95Av2
Ben Bolstad
- [BioC] sam and the new version
el mousselly antra
- [BioC] Help in biomaRt
Wolfgang Huber
- [BioC] RE : Re: question on limma package
William Mifsud
- [BioC] sam and the new version
J.delasHeras at ed.ac.uk
- [BioC] GOHyperG stats question
Suraj Menon
- [BioC] sam and the new version
Holger Schwender
- [BioC] ADD: Imputation problem in aCGH
Benjamin Otto
- [BioC] analysis of HG_U95A vs. HG_U95Av2
Rob Scharpf
- [BioC] RE : Re: sam and the new version
el mousselly antra
- [BioC] RE : Re: question on limma package
Jenny Drnevich
- [BioC] limma and cybert T difference on variance
el mousselly antra
- [BioC] Error with arrayQuality
Shripad Sinari
- [BioC] network (interaction) data repositories for bioc?
Paul Shannon
- [BioC] go count
ariel at df.uba.ar
- [BioC] go count
Seth Falcon
- [BioC] Error with arrayQuality
Paquet, Agnes
- [BioC] Error with arrayQuality
Seth Falcon
- [BioC] GO terms not found in goTools and GO
Lina Hultin-Rosenberg
- [BioC] RE : Re: sam and the new version
el mousselly antra
- [BioC] RE : Re: sam and the new version
Holger Schwender
- [BioC] RE : Re: RE : Re: siggesn and ebam
el mousselly antra
- [BioC] RE : Re: RE : Re: siggesn and ebam
Holger Schwender
- [BioC] SScore Compatibility Problems?
Chris Parkin
- [BioC] LumiBatch Object - Help
Sharon
- [BioC] network (interaction) data repositories for bioc?
Wolfgang Huber
- [BioC] GO terms not found in goTools and GO
Wolfgang Huber
- [BioC] OT: random priming labelling - label nucleotide or primer?
J.delasHeras at ed.ac.uk
- [BioC] SScore Compatibility Problems?
Wolfgang Huber
- [BioC] Affystart function in Affycoretools
Sachin Mathur
- [BioC] SScore Compatibility Problems?
Richard Kennedy
- [BioC] RE : missing dat in siggenes
el mousselly antra
- [BioC] Input for KS test
Ken Termiso
- [BioC] GO terms not found in goTools and GO
Seth Falcon
- [BioC] SScore Compatibility Problems?
Kasper Daniel Hansen
- [BioC] SScore Compatibility Problems?
Chris Parkin
- [BioC] how to make probe environments for use with GCRMA
Wittner, Ben, Ph.D.
- [BioC] GO terms not found in goTools and GO
Lina Hultin-Rosenberg
- [BioC] how to make probe environments for use with GCRMA
Kasper Daniel Hansen
- [BioC] BIRD 2008 call for workshop proposal
Prof. Roland Wagner
- [BioC] Getting GO term from GOids
Alex Tsoi
- [BioC] Getting GO term from GOids
Seth Falcon
- [BioC] how to revert to an older limma version?
Maya Bercovich
- [BioC] how to make probe environments for use with GCRMA
claire
- [BioC] Limma and randomized block design for time-course microarray experiment
Serge Eifes
- [BioC] Getting GO term from GOids
Alex Tsoi
- [BioC] fitPLM query
dhruv pant
- [BioC] Getting GO term from GOids
James W. MacDonald
- [BioC] fitPLM query
Ben Bolstad
- [BioC] limma contrast matrix
Florence Combes
- [BioC] Affystart function in Affycoretools
James W. MacDonald
- [BioC] retrieving specific FDR value from SAM
Alex Tsoi
- [BioC] limma contrast matrix
Florence Combes
- [BioC] extraction of detectable genes in illumina data.
Zara Ghazoui
- [BioC] generic quality control
Weiwei Shi
- [BioC] how to store multiple relationships between nodes in graphNEL?
Paul Shannon
- [BioC] how to store multiple relationships between nodes in graphNEL?
Seth Falcon
- [BioC] LumiBatch Object - Help
Michal Blazejczyk
- [BioC] How to make a list as below
Li, Aiguo (NIH/NCI) [C]
- [BioC] How to make a list as below
Benilton Carvalho
- [BioC] How to make a list as below
Weiwei Shi
- [BioC] how to store multiple relationships between nodes in graphNEL?
Paul Shannon
- [BioC] LAD (Logical analysis of data) algorithm package?
Weiyin Zhou
- [BioC] Rgraphviz - how to use node positions from one graph as node positions in another?
Søren Højsgaard
- [BioC] how to store multiple relationships between nodes in graphNEL?
Seth Falcon
- [BioC] retrieving specific FDR value from SAM
Holger Schwender
- [BioC] Limma and randomized block design for time-course microarray experiment
Gordon Smyth
- [BioC] Rgraphviz - how to use node positions from one graph as node positions in another?
Kasper Daniel Hansen
- [BioC] Rgraphviz - how to use node positions from one graph as node positions in another?
Li.Long at isb-sib.ch
- [BioC] Problems with gcrma using latest version of R and Bioconductor
Sebastian Bauer
- [BioC] Problems with gcrma using latest version of R and Bioconductor
James W. MacDonald
- [BioC] problem with fetching gene information in biomaRt for mouse_430_2
Edmund Chang
- [BioC] problem with fetching gene information in biomaRt for mouse_430_2
Cei Abreu-Goodger
- [BioC] how to store multiple relationships between nodes in graphNEL?
Paul Shannon
- [BioC] Color Question about image function in graphics package
swang
- [BioC] Color Question about image function in graphics package
Joern Toedling
- [BioC] read.phenoData vs read.AnnotatedDataFrame
Johnstone, Alice
- [BioC] how to store multiple relationships between nodes in graphNEL?
Seth Falcon
- [BioC] read.phenoData vs read.AnnotatedDataFrame
Martin Morgan
- [BioC] read.phenoData vs read.AnnotatedDataFrame
Herve Pages
- [BioC] Problems with gcrma using latest version of R and Bioconductor
Sebastian Bauer
- [BioC] beadarray package: problem with bead level data
Krys Kelly
- [BioC] Problems with gcrma using latest version of R and Bioconductor
James MacDonald
- [BioC] beadarray package: problem with bead level data
J.delasHeras at ed.ac.uk
- [BioC] Problems with gcrma using latest version of R and Bioconductor
Seth Falcon
- [BioC] Bug in probeNames()
Groot, Philip de
- [BioC] random permutation for one-sample high dimensional data set
carol white
- [BioC] read.phenoData vs read.AnnotatedDataFrame
Johnstone, Alice
- [BioC] beadarray package: problem with bead level data
Matt Ritchie
- [BioC] beadarray package: problem with bead level data
Mike Smith
- [BioC] Post-doctoral position in statistical genomics at the Research Institute of the Hospital for Sick Children - Toronto, Canada
Joseph Beyene
- [BioC] Problems with gcrma using latest version of R and Bioconductor
Sebastian Bauer
- [BioC] Finding GO leaf nodes for an ontology - which package?
Tim Smith
- [BioC] Problems with gcrma using latest version of R and Bioconductor
Francois Pepin
- [BioC] Finding GO leaf nodes for an ontology - which package?
John Zhang
- [BioC] Finding GO leaf nodes for an ontology - which package?
Tim Smith
- [BioC] beadarray package: problem with bead level data
Krys Kelly
- [BioC] Finding GO leaf nodes for an ontology - which package?
John Zhang
- [BioC] Finding GO leaf nodes for an ontology - which package?
Seth Falcon
- [BioC] Finding GO leaf nodes for an ontology - which package?
Herve Pages
- [BioC] Finding GO leaf nodes for an ontology - which package?
Seth Falcon
- [BioC] affxparser: bug fix in Bioc 2.0
Kasper Daniel Hansen
- [BioC] Error in QAReport function of package affyQCReport
Mark W Kimpel
- [BioC] Error in QAReport function of package affyQCReport
Robert Gentleman
- [BioC] Compare GO lists
Ana Conesa
- [BioC] Error in QAReport function of package affyQCReport
Mark W Kimpel
- [BioC] Error in QAReport function of package affyQCReport
Robert Gentleman
- [BioC] Finding GO leaf nodes for an ontology - which package?
Seth Falcon
- [BioC] Error in QAReport function of package affyQCReport
Seth Falcon
- [BioC] Finding GO leaf nodes for an ontology - which package?
Robert Gentleman
- [BioC] comparing GO lists
Robert Gentleman
- [BioC] comparing GO lists
Ana Conesa
- [BioC] Error in QAReport function of package affyQCReport
Mark W Kimpel
- [BioC] comparing GO lists
Robert Gentleman
- [BioC] Error in QAReport function of package affyQCReport
Robert Gentleman
- [BioC] comparing GO lists
Herve Pages
- [BioC] Bug in probeNames()
lgautier at altern.org
- [BioC] Error in QAReport function of package affyQCReport
Mark W Kimpel
- [BioC] exprSet in alongChrom from geneplotter
Heidi Dvinge
- [BioC] Error in QAReport function of package affyQCReport
Robert Gentleman
- [BioC] One-Color Agilent miRNA microarrays
Francesco Favero
- [BioC] One-Color Agilent miRNA microarrays
Pedro López-Romero
- [BioC] memory - global test
Simo.rossi
- [BioC] globalTest - memory and input
Simo.rossi
- [BioC] One-Color Agilent miRNA microarrays
Francesco Favero
- [BioC] One-Color Agilent miRNA microarrays
Pedro López-Romero
- [BioC] memory - global test
Seth Falcon
- [BioC] One-Color Agilent miRNA microarrays
Francesco Favero
- [BioC] memory - global test
Simo.rossi
- [BioC] memory - global test
Seth Falcon
- [BioC] Affymetrix annotation package
Hans-Ulrich Klein
- [BioC] FYI: update on recent flurry of back-dated posts
Seth Falcon
- [BioC] FDR of enrichment analysis and other questions on GOstats
Weiwei Shi
- [BioC] FDR of enrichment analysis and other questions on GOstats
Mark W Kimpel
- [BioC] GO analysis code snippet
Simon Lin
- [BioC] Finding GO leaf nodes for an ontology - which package?
Tim Smith
- [BioC] Looking for extra Income? Please Read.
hardware.inc505 at gmail.com
- [BioC] affyQCReport before and after normalization
Sebastien Gerega
- [BioC] problems in limma
De-Jian,ZHAO
- [BioC] heatmap.2
Kauer Maximilian Otto
- [BioC] GO analysis code snippet
J.Oosting at lumc.nl
- [BioC] GO analysis code snippet
Adrian Alexa
- [BioC] statistical course
Noura Chelbat
- [BioC] Affymetrix annotation package
James W. MacDonald
- [BioC] Affymetrix annotation package
John Zhang
- [BioC] affyQCReport before and after normalization
James W. MacDonald
- [BioC] Finding GO leaf nodes for an ontology - which package?
Seth Falcon
- [BioC] array CGH software
Igor Wojciechowski
- [BioC] Affymetrix annotation package
Lapointe, David
- [BioC] GO analysis code snippet
Seth Falcon
- [BioC] exprSet in alongChrom from geneplotter
Seth Falcon
- [BioC] Affymetrix annotation package
Crispin Miller
- [BioC] Installing Ruuid library
francesca
- [BioC] statistical course
Kasper Daniel Hansen
- [BioC] comparing microarray gene signatures
Yi, Andrew
- [BioC] Installing Ruuid library
Herve Pages
- [BioC] Bug in probeNames()
Wolfgang Huber
- [BioC] One-Color Agilent miRNA microarrays
Wolfgang Huber
- [BioC] Getting all the gene names and the locus link ID from different platforms
Alex Tsoi
- [BioC] Getting all the gene names and the locus link ID from different platforms
John Zhang
- [BioC] Getting all the gene names and the locus link ID from different platforms
Marc Carlson
- [BioC] Getting all the gene names and the locus link ID from different platforms
Alex Tsoi
Last message date:
Tue Jul 31 20:58:56 CEST 2007
Archived on: Tue Jul 31 20:59:17 CEST 2007
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