[BioC] Affymetrix annotation package
Hans-Ulrich Klein
h.klein at uni-muenster.de
Mon Jul 30 18:12:16 CEST 2007
Dear list,
I wonder about the annotation of some probesets on Affymetrix chips. E.g.:
> library("hgu95av2")
> get("1726_at", env=hgu95av2ACCNUM)
[1] "HG919-HT919"
Is "HG919-HT919" really an accession number? I do not get any hits at NCBI's GenBank. NetAffx gives the same identifier for that probeset, but in a field called "Representative Public ID".
There are some more probesets with "HGXXX-HTXXX" as ACCNUM on the hgu95av2 chip. Where can get more information about this identifiers?
Thanks,
Hans-Ulrich
More information about the Bioconductor
mailing list