[BioC] sam and the new version

[J.delasHeras at ed.ac.uk]

Quoting el mousselly antra <elmousselly.antra at yahoo.fr>:

> dear schwender,
> i am using sam in siggens but i have some problems
> some functions don't work as i have the habit to use it, like   
> summary(sam.out)
> sum.sam.out <- summary(sam.out, 0.4, ll = FALSE)
> sum.sam.out at mat.sig
> only function sam work well but a lot of functions  functions
> have some problems or changes that i don'know how  but i think
>   in the version 1.2.0 in the past
> have worked but now this new version  d'ont work  in the version 1.2.11
> i don't know what'the problem and what's  i have to do
>   thank you
> sincerly

I'm afraid I cannot solve your problem with sam, but here are a few  
punctuation marks for you:

...,,,,...,,.,.,...,,,,..,,,,,.,.,.,...,,,,,.......,.,.....,...,..,,,...

please sprinkle them liberally on your messages. It helps make them a  
lot more readable ;-)

Jose


-- 
Dr. Jose I. de las Heras                      Email: J.delasHeras at ed.ac.uk
The Wellcome Trust Centre for Cell Biology    Phone: +44 (0)131 6513374
Institute for Cell & Molecular Biology        Fax:   +44 (0)131 6507360
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University of Edinburgh
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UK