[BioC] exonmap/xmap database install problem

Sean Davis sdavis2 at mail.nih.gov
Thu Jul 5 14:46:36 CEST 2007


Johannes Rainer wrote:
> hi,
> i just downloaded the x:map mysql database (xmap_homo_sapiens_core_45_36g)
> and tried to install it on my local computer. i first created the database,
> and following the installation instruction i used the "create.script" to
> create the database. but running
>
> mysql -h localhost -u jo -p homo_sapiens_core_45_36g < create.script
>
> resulted in the error
> ERROR 1146 (42S02) at line 95: Table
> 'homo_sapiens_core_45_36g.prediction_transcript' doesn't exist
>
> looks like some misspelling in the create.script file?
> by the way i am running mysql 5.0.37
>   
Hi, Johannes.

Is this a question better directed to the developers of the database?  
Ensembl has a help email that you could try.

Sean



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