March 2013 Archives by date
Starting: Fri Mar 1 03:16:50 CET 2013
Ending: Sun Mar 31 22:16:54 CEST 2013
Messages: 668
- [BioC] ChIPpeakAnno "examplePattern.fa" file
Paul Shannon
- [BioC] Visualization of alignments with mismatch bases
Michael Lawrence
- [BioC] Visualization of alignments with mismatch bases
Tengfei Yin
- [BioC] Normalization
Gordon K Smyth
- [BioC] easyRNA adapting annotations to avoid overlapping synthetic exons
Nicolas Delhomme
- [BioC] workflow from NormqPCR 5.1 to 5.3
James Perkins
- [BioC] Visualization of alignments with mismatch bases
Michael Lawrence
- [BioC] problem with reading gpr files
konika chawla
- [BioC] multi-mapped reads: Cufflinks + baySeq? edgeR?
Hilary [guest]
- [BioC] statistical test for pairwise comparison
chris Jhon
- [BioC] Crlmm package
khadeeja ismail
- [BioC] Visualization of alignments with mismatch bases
Tengfei Yin
- [BioC] cummerbund how to get matrix for csheatmap
Adrian Johnson
- [BioC] Visualization of alignments with mismatch bases
Martin Morgan
- [BioC] multi-mapped reads: Cufflinks + baySeq? edgeR?
Ryan C. Thompson
- [BioC] BSgenome.Dmelanogaster.UCSC.dm3 in R 3.0
Dan Tenenbaum
- [BioC] How to annotate Illumina HumanHT-12 v3 chips?
Feng Tian
- [BioC] pileup coverage from BAM file
Martin Morgan
- [BioC] annotationTools: character vector clean-up
Hooiveld, Guido
- [BioC] Visualization of alignments with mismatch bases
Tengfei Yin
- [BioC] A question about MAplot in the oligo package
He, Yiwen (NIH/CIT) [C]
- [BioC] Crlmm package
Matthew Ritchie
- [BioC] Retrieving all entrez identifiers that are annotated in KEGG pathways
Anirban [guest]
- [BioC] Retrieving all entrez identifiers that are annotated in KEGG pathways
ANIRBAN BHAR
- [BioC] multi-mapped reads: Cufflinks + baySeq? edgeR?
Hilary [guest]
- [BioC] Retrieving all entrez identifiers that are annotated in KEGG pathways
James W. MacDonald
- [BioC] import.chain: where are the chain files?
Wim Kreinen
- [BioC] Question: type of NOISeq package input file
Chuanbao [guest]
- [BioC] illegal operand when I run DEXSeq
Wolfgang Huber
- [BioC] import.chain: where are the chain files?
Vincent Carey
- [BioC] finding neigbouring intervals for 2 GRange objects
Hermann Norpois
- [BioC] how to annotate Illumina HumanHT-12 v3 chips?
Feng Tian
- [BioC] finding neigbouring intervals for 2 GRange objects
Harris A. Jaffee
- [BioC] how to use the confs value in crlmm
Shrek [guest]
- [BioC] Practical Workshop on High-Throughput Sequencing Data Analysis. 30 Sep - 4 Oct 2013, OIST, Okinawa, Japan
Kathi Zarnack
- [BioC] N
Sandeep Jose Joseph
- [BioC] ComBat: How to choose multiple covariates in ComBat analysis- Need advice
Johnson, William Evan
- [BioC] matchPWM() questions
Ugo Borello
- [BioC] illegal operand when I run DEXSeq
Ou, Jianhong
- [BioC] Retrieving all entrez identifiers that are annotated in KEGG pathways
ANIRBAN BHAR
- [BioC] Analysing grouped datasets in repitools
Andrew Beggs [guest]
- [BioC] finding neigbouring intervals for 2 GRange objects
Valerie Obenchain
- [BioC] finding neigbouring intervals for 2 GRange objects
Michael Lawrence
- [BioC] SCAN-UPC: 12079 of 22283 probes returned for hgu133a CELs?
Steve Piccolo
- [BioC] Questions about MAplot in the oligo package
He, Yiwen (NIH/CIT) [C]
- [BioC] enabling reproducible research & R package management & install.package.version & BiocLite
Cook, Malcolm
- [BioC] enabling reproducible research & R package management & install.package.version & BiocLite
Aaron Mackey
- [BioC] SCAN-UPC: 12079 of 22283 probes returned for hgu133a CELs?
Andrew Yates
- [BioC] flowQ loading error after installing ImageMagick
Chandra Jack [guest]
- [BioC] enabling reproducible research & R package management & install.package.version & BiocLite
Steve Lianoglou
- [BioC] flowQ loading error after installing ImageMagick
Dan Tenenbaum
- [BioC] Limma: difficulties making multiple comparisons within one multiple-group model
Scott Robinson [guest]
- [BioC] [Rd] enabling reproducible research & R package management & install.package.version & BiocLite
Dan Tenenbaum
- [BioC] finding neigbouring intervals for 2 GRange objects
Hervé Pagès
- [BioC] Questions about MAplot in the oligo package
Benilton Carvalho
- [BioC] how to use the confs value in crlmm
Benilton Carvalho
- [BioC] VariantAnnotation::readVcf is reordering the FORMAT field of my VCF file
hickey at wehi.EDU.AU
- [BioC] flowQ loading error after installing ImageMagick
Chandra Jack
- [BioC] flowQ loading error after installing ImageMagick
Dan Tenenbaum
- [BioC] VariantAnnotation::readVcf is reordering the FORMAT field of my VCF file
Valerie Obenchain
- [BioC] finding neigbouring intervals for 2 GRange objects
Valerie Obenchain
- [BioC] flowQ loading error after installing ImageMagick
Chandra Jack
- [BioC] VariantAnnotation::readVcf is reordering the FORMAT field of my VCF file
Peter Hickey
- [BioC] flowQ loading error after installing ImageMagick
Dan Tenenbaum
- [BioC] flowQ loading error after installing ImageMagick
Chandra Jack
- [BioC] flowQ loading error after installing ImageMagick
Dan Tenenbaum
- [BioC] flowQ loading error after installing ImageMagick
Chandra Jack
- [BioC] flowQ loading error after installing ImageMagick
Dan Tenenbaum
- [BioC] flowQ loading error after installing ImageMagick
Chandra Jack
- [BioC] flowQ loading error after installing ImageMagick
Nikolas Pontikos
- [BioC] makeTranscriptDbFromBiomart - yeast - 2micron plasmid missing
Stefanie Tauber
- [BioC] edgeR log likelihood values of GLM
Ari Eszter
- [BioC] Problem in installing biocLite package
Mohit Swarnkar
- [BioC] [Rd] enabling reproducible research & R package management & install.package.version & BiocLite
Cook, Malcolm
- [BioC] [Rd] enabling reproducible research & R package management & install.package.version & BiocLite
Cook, Malcolm
- [BioC] [Rd] enabling reproducible research & R package management & install.package.version & BiocLite
Geoff Jentry
- [BioC] Questions about MAplot in the oligo package
He, Yiwen (NIH/CIT) [C]
- [BioC] flowQ loading error after installing ImageMagick
Dan Tenenbaum
- [BioC] flowQ loading error after installing ImageMagick
Chandra Jack
- [BioC] flowQ loading error after installing ImageMagick
Dan Tenenbaum
- [BioC] flowQ loading error after installing ImageMagick
Harris A. Jaffee
- [BioC] flowQ loading error after installing ImageMagick
Chandra Jack
- [BioC] flowQ loading error after installing ImageMagick
Dan Tenenbaum
- [BioC] flowQ loading error after installing ImageMagick
Chandra Jack
- [BioC] flowQ loading error after installing ImageMagick
Dan Tenenbaum
- [BioC] edgeR design matrix and contrast questions
Findley Finseth
- [BioC] Analysis of Affymetrix Mouse Gene 2.0 ST arrays
Naxerova, Kamila
- [BioC] limma edger setting up linear model
steven wink
- [BioC] Analysis of Affymetrix Mouse Gene 2.0 ST arrays
cstrato
- [BioC] Analysis of Affymetrix Mouse Gene 2.0 ST arrays
James W. MacDonald
- [BioC] [Rd] enabling reproducible research & R package management & install.package.version & BiocLite
Steve Lianoglou
- [BioC] [Rd] enabling reproducible research & R package management & install.package.version & BiocLite
Cook, Malcolm
- [BioC] edgeR log likelihood values of GLM
Gordon K Smyth
- [BioC] Limma: difficulties making multiple comparisons within one multiple-group model
Gordon K Smyth
- [BioC] Limma: difficulties making multiple comparisons within one multiple-group model
Scott Robinson
- [BioC] Running new and old versions of edgeR concurrently
Gordon K Smyth
- [BioC] how to annotate Illumina HumanHT-12 v3 chips?
Ying Wu
- [BioC] Cannot connect to unimart using biomaRt
Dana Pascovici [guest]
- [BioC] cummerbund how to get matrix for csheatmap
Valerie Obenchain
- [BioC] cummerbund how to get matrix for csheatmap
Loyal Goff
- [BioC] Problem in installing biocLite package
Dan Tenenbaum
- [BioC] DESeq - plotPCA
Zaki Fadlullah [guest]
- [BioC] makeTranscriptDbFromBiomart - yeast - 2micron plasmid missing
Hervé Pagès
- [BioC] how to annotate Illumina HumanHT-12 v3 chips?
Mark Dunning
- [BioC] EasyRNASeq - gff file is not recognized
Gabriela [guest]
- [BioC] limma edger setting up linear model
Steven
- [BioC] EasyRNASeq - gff file is not recognized
Nicolas Delhomme
- [BioC] Fwd: problem with reading gpr files
konika chawla
- [BioC] EasyRNASeq - gff file is not recognized
Nicolas Delhomme
- [BioC] [Rd] enabling reproducible research & R package management & install.package.version & BiocLite
Lapointe, David
- [BioC] DESeq - plotPCA
James W. MacDonald
- [BioC] edgeR design matrix and contrast questions
Ryan Thompson
- [BioC] DESeq - plotPCA
Simon Anders
- [BioC] Analysis of Affymetrix Mouse Gene 2.0 ST arrays
Naxerova, Kamila
- [BioC] Analysis of Affymetrix Mouse Gene 2.0 ST arrays
Hooiveld, Guido
- [BioC] RPKM calculation genewise
Nicolas Delhomme
- [BioC] Analysis of Affymetrix Mouse Gene 2.0 ST arrays
Hooiveld, Guido
- [BioC] how to annotate Illumina HumanHT-12 v3 chips?
Steve Lianoglou
- [BioC] how to annotate Illumina HumanHT-12 v3 chips?
Kevin R. Coombes
- [BioC] options on outputing gene expression based on gene level instead of probe set level for justRMA
Jack Luo
- [BioC] build TSS from biomaRt for ChIPpeakAnno, how to decide the mm9 and mm10 assembly?
Zhu, Lihua (Julie)
- [BioC] [Rd] enabling reproducible research & R package management & install.package.version & BiocLite
Cook, Malcolm
- [BioC] Analysis of Affymetrix Mouse Gene 2.0 ST arrays
cstrato
- [BioC] [Rd] enabling reproducible research & R package management & install.package.version & BiocLite
Tim Triche, Jr.
- [BioC] Analysis of Affymetrix Mouse Gene 2.0 ST arrays
James W. MacDonald
- [BioC] edgeR design matrix and contrast questions
Findley Finseth
- [BioC] edgeR design matrix and contrast questions
Ryan C. Thompson
- [BioC] ReadqPCR: [[hkgs,]] incorrect number of dimensions
Franklin Johnson [guest]
- [BioC] Beadarray - combining the 2 swath files
Sunitha M
- [BioC] beadarray - combining swath files
Sunitha M
- [BioC] options on outputing gene expression based on gene level instead of probe set level for justRMA
James W. MacDonald
- [BioC] Analysis of Affymetrix Mouse Gene 2.0 ST arrays
James W. MacDonald
- [BioC] Cannot connect to unimart using biomaRt
Steffen Durinck
- [BioC] edgeR design matrix and contrast questions
Gordon K Smyth
- [BioC] Analysis of Affymetrix Mouse Gene 2.0 ST arrays
Naxerova, Kamila
- [BioC] edgeR: new defaults of estimateTagwiseDisp and exactTest
Zhuzhu Zhang
- [BioC] edgeR design matrix and contrast questions
Gordon K Smyth
- [BioC] edgeR design matrix and contrast questions
Findley Finseth
- [BioC] IlluminaHumanMethylation450kprobe for nearest TSS calculation question
Dale Watkins [guest]
- [BioC] IlluminaHumanMethylation450kprobe for nearest TSS calculation question
Tim Triche, Jr.
- [BioC] ReadqPCR: [[hkgs,]] incorrect number of dimensions
James Perkins
- [BioC] IlluminaHumanMethylation450kprobe for nearest TSS calculation question
Watkins, Dale (Health)
- [BioC] Annotation problem with Microarray Gene Rat ST 1.0
Antje Kammermeier
- [BioC] Fwd: problem with reading gpr files
Maciej Jończyk
- [BioC] Expected value of finding a sequence
Tim Smith
- [BioC] options on outputing gene expression based on gene level instead of probe set level for justRMA
James W. MacDonald
- [BioC] Annotation problem with Microarray Gene Rat ST 1.0
James W. MacDonald
- [BioC] Analysis of Affymetrix Mouse Gene 2.0 ST arrays
Naxerova, Kamila
- [BioC] options on outputing gene expression based on gene level instead of probe set level for justRMA
Jack Luo
- [BioC] Analysis of Affymetrix Mouse Gene 2.0 ST arrays
James W. MacDonald
- [BioC] Analysis of Affymetrix Mouse Gene 2.0 ST arrays
Naxerova, Kamila
- [BioC] Analysis of Affymetrix Mouse Gene 2.0 ST arrays
James W. MacDonald
- [BioC] Analysis of Affymetrix Mouse Gene 2.0 ST arrays
James W. MacDonald
- [BioC] IlluminaHumanMethylation450kprobe for nearest TSS calculation question
Florence Cavalli
- [BioC] options on outputing gene expression based on gene level instead of probe set level for justRMA
Peter Langfelder
- [BioC] ReadqPCR: [[hkgs,]] incorrect number of dimensions
Johnson, Franklin Theodore
- [BioC] Analysis of Affymetrix Mouse Gene 2.0 ST arrays
Naxerova, Kamila
- [BioC] Multiple multivariate regression using glmnet
somnath bandyopadhyay
- [BioC] DESeq - plotPCA
Wolfgang Huber
- [BioC] Visualization of metabolic network in lpSolve format
Denis Kazakiewicz
- [BioC] Visualization of metabolic network in lpSolve format
Paul Shannon
- [BioC] Visualization of metabolic network in lpSolve format
Denis Kazakiewicz
- [BioC] Fwd: Re: Visualization of metabolic network in lpSolve format
Denis Kazakiewicz
- [BioC] Analysis of Affymetrix Mouse Gene 2.0 ST arrays
Benilton Carvalho
- [BioC] methyAnalysis - changes to GenoSet
Lavinia Gordon
- [BioC] edgeR: new defaults of estimateTagwiseDisp and exactTest
Gordon K Smyth
- [BioC] Testing for logFC significantly larger than threshold; or: calculating confidence intervals in limma
January Weiner
- [BioC] Testing for logFC significantly larger than threshold; or: calculating confidence intervals in limma
Hooiveld, Guido
- [BioC] cummeRbund
valentina indio [guest]
- [BioC] cummeRbund
Dan Du
- [BioC] problem with reading gpr files
konika chawla
- [BioC] problem with reading gpr files
konika chawla
- [BioC] biocLite and unknown svn revision
Michael Lawrence
- [BioC] biocLite and unknown svn revision
Martin Morgan
- [BioC] cummerbund how to get matrix for csheatmap
Adrian Johnson
- [BioC] EBImage: filtering in the presence of NAs
Arnaud Duranel
- [BioC] methyAnalysis - changes to GenoSet
Martin Morgan
- [BioC] biocLite and unknown svn revision
Dan Tenenbaum
- [BioC] (no subject)
Liu, XiaoChuan
- [BioC] (no subject)
Simon Anders
- [BioC] (no subject)
Liu, XiaoChuan
- [BioC] Expected value of finding a sequence (Tim Smith)
Alvaro J. González
- [BioC] Expected value of finding a sequence (Tim Smith)
Alvaro J. González
- [BioC] Expected value of finding a sequence (Tim Smith)
Alvaro J. González
- [BioC] biocLite and unknown svn revision
Michael Lawrence
- [BioC] biocLite and unknown svn revision
Martin Morgan
- [BioC] Visualization of metabolic network in lpSolve format
Denis Kazakiewicz
- [BioC] make check with Biobase 2.18.0
Nigel Horne
- [BioC] make check with Biobase 2.18.0
Dan Tenenbaum
- [BioC] make check with Biobase 2.18.0
Martin Morgan
- [BioC] make check with Biobase 2.18.0
Nigel Horne
- [BioC] make check with Biobase 2.18.0
Dan Tenenbaum
- [BioC] make check with Biobase 2.18.0
Martin Morgan
- [BioC] make check with Biobase 2.18.0
Dan Tenenbaum
- [BioC] make check with Biobase 2.18.0
Nigel Horne
- [BioC] make check with Biobase 2.18.0
Dan Tenenbaum
- [BioC] matchPWM() questions
Hervé Pagès
- [BioC] make check with Biobase 2.18.0
Nigel Horne
- [BioC] matchPWM() questions
Ugo Borello
- [BioC] EBImage: filtering in the presence of NAs
Wolfgang Huber
- [BioC] EBImage: filtering in the presence of NAs
Wolfgang Huber
- [BioC] EBImage: filtering in the presence of NAs
Arnaud Duranel
- [BioC] combine two microarray datasets based on affymatrix and cDNA array
Avinash [guest]
- [BioC] combine two microarray datasets based on affymatrix and cDNA array
Sean Davis
- [BioC] combine two microarray datasets based on affymatrix and cDNA array
avinash sethi
- [BioC] combine two microarray datasets based on affymatrix and cDNA array
Sean Davis
- [BioC] topGO expected values showing NA
Kishor Tappita
- [BioC] topGO expected value column showing NA
Kishor Tappita
- [BioC] no method for coercing this S4 class to a vector
Thiago Maia
- [BioC] no method for coercing this S4 class to a vector
Thiago Maia
- [BioC] no method for coercing this S4 class to a vector
Martin Morgan
- [BioC] no method for coercing this S4 class to a vector
Thiago Maia
- [BioC] ChIPpeakAnno "examplePattern.fa" file
José Luis Lavín
- [BioC] no method for coercing this S4 class to a vector
Martin Morgan
- [BioC] JOB: 3 year post for Postdoctoral Research Scientist in Statistical Functional Genomics at University of Oxford
Peter Humburg
- [BioC] Negative parameter error when using goseq
Tarca, Adi
- [BioC] Visualization of metabolic network in lpSolve format
Paul Shannon
- [BioC] no method for coercing this S4 class to a vector
Martin Morgan
- [BioC] Boston Bioconductor Basics, April 4-5 2013, only two spots left
Vincent Carey
- [BioC] negative correlation from limma's duplicateCorrelation
Ian Sudbery
- [BioC] methyAnalysis - changes to GenoSet
Lavinia Gordon
- [BioC] anova like test in edgeR
Luis alberto Martinez lopez
- [BioC] anova like test in edgeR
Ryan C. Thompson
- [BioC] edgeR: paired samples DGE and GLM
Alessandra [guest]
- [BioC] methyAnalysis - changes to GenoSet
Kasper Daniel Hansen
- [BioC] QuasiSeq vs DSS
Richard Friedman
- [BioC] methyAnalysis - changes to GenoSet
Tim Triche, Jr.
- [BioC] displaying the image with EBImage
Nima [guest]
- [BioC] Help on Illumina HumanHT12 v4 chromosome filtering
Kemal Akat
- [BioC] QuasiSeq vs DSS
Ryan C. Thompson
- [BioC] QuasiSeq vs DSS
Richard Friedman
- [BioC] QuasiSeq vs DSS
Ryan C. Thompson
- [BioC] edgeR: paired samples DGE and GLM
Ryan C. Thompson
- [BioC] edgeR: new defaults of estimateTagwiseDisp and exactTest
Zhuzhu Zhang
- [BioC] Subsampling of BAM/SAM alignments
Julian Gehring
- [BioC] DESeq2
Wolfgang Huber
- [BioC] displaying the image with EBImage
Wolfgang Huber
- [BioC] displaying the image with EBImage
Nima Ahmadian
- [BioC] ArrayExpress Question
Amy Vandiver
- [BioC] displaying the image with EBImage
Andrzej Oleś
- [BioC] edgeR: new defaults of estimateTagwiseDisp and exactTest
Gordon K Smyth
- [BioC] negative correlation from limma's duplicateCorrelation
Gordon K Smyth
- [BioC] anova like test in edgeR
Gordon K Smyth
- [BioC] displaying the image with EBImage
Nima Ahmadian
- [BioC] Negative parameter error when using goseq
Nadia Davidson
- [BioC] Error in getGEO command with GSEMatrix=TRUE
Marwaha, Shruti (marwahsi)
- [BioC] anova like test in edgeR
Gordon K Smyth
- [BioC] Subsampling of BAM/SAM alignments
Martin Morgan
- [BioC] biomaRt access for NCBIM37 build of mouse genome
chris_utah
- [BioC] anova like test in edgeR
Ryan C. Thompson
- [BioC] DESeq2
Ryan C. Thompson
- [BioC] issue when doing program.
Laya Rose
- [BioC] biomaRt access for NCBIM37 build of mouse genome
Hans-Rudolf Hotz
- [BioC] DESeq2
Michael Love
- [BioC] Error in getGEO command with GSEMatrix=TRUE
Sean Davis
- [BioC] downloading a conservation track with rtracklayer on several chromosome seqs
Dario Strbenac
- [BioC] ArrayExpress Question
Ibrahim Emam
- [BioC] Loading eSet.r objects from ArrayExpress
Ibrahim Emam
- [BioC] biomaRt access for NCBIM37 build of mouse genome
Christopher T Gregg
- [BioC] startup options
Kasper Daniel Hansen
- [BioC] startup options
Benilton Carvalho
- [BioC] Bioconductor Digest, Vol 121, Issue 13
Thornton, Matthew
- [BioC] startup options
Nicolas Delhomme
- [BioC] time course analyses Illumina RNA-seq data
Sandra Rehan
- [BioC] startup options
Martin Morgan
- [BioC] R Advanced Programming Courses by XLSolutions Corp
sue at xlsolutions-corp.com
- [BioC] time course analyses Illumina RNA-seq data
Steve Lianoglou
- [BioC] yieldSize and paired end data in SummarizeOverlaps error?
Thomas Whisenant
- [BioC] time course analyses Illumina RNA-seq data
Ryan C. Thompson
- [BioC] Subsampling of BAM/SAM alignments
Martin Morgan
- [BioC] issue when doing program.
James W. MacDonald
- [BioC] biocLite("TxDb.Hsapiens.UCSC.hg19.knownGene") fails
Wim Kreinen
- [BioC] Quick questions about RCytoscape
Ricardo Silva
- [BioC] (no subject)
Gordon K Smyth
- [BioC] QuasiSeq vs DSS
Gordon K Smyth
- [BioC] Error in getGEO command with GSEMatrix=TRUE
Marwaha, Shruti (marwahsi)
- [BioC] biocLite("TxDb.Hsapiens.UCSC.hg19.knownGene") fails
Dan Tenenbaum
- [BioC] Is GO.db out of date?
konika chawla
- [BioC] DEXseq: transcript plot
Vincenzo Capece
- [BioC] Why Gene Set Enrichment results of two data set of the same disease are very different?
Feng Tian
- [BioC] Why Gene Set Enrichment results of two data set of the same disease are very different?
Sean Davis
- [BioC] edgeR Warings
Tongwu [guest]
- [BioC] Segfault in MEDIPS MEDIPS.methylProfiling() with ROI file
Stephen Turner
- [BioC] issue when doing program.
James W. MacDonald
- [BioC] Quick questions about RCytoscape
Paul Shannon
- [BioC] ANOVA test after VST in DESeq
Liu, XiaoChuan
- [BioC] edgeR Warings
Mark Robinson
- [BioC] GRanges error - Error: identical(colnames(classinfo), colnames(out)) is not TRUE
Richard Birnie [guest]
- [BioC] [Solved] GRanges error - Error: identical(colnames(classinfo), colnames(out)) is not TRUE
Richard Birnie
- [BioC] Segfault in MEDIPS MEDIPS.methylProfiling() with ROI file
Lukas Chavez
- [BioC] Illumina Human 6 V1 expression annotation file
Jinyan Huang
- [BioC] Quick questions about RCytoscape
Ricardo Silva
- [BioC] ANOVA test after VST in DESeq
Simon Anders
- [BioC] metabolite to gene - mapping
n omranian
- [BioC] metabolite to gene - mapping
Richard Friedman
- [BioC] metabolite to gene - mapping
n omranian
- [BioC] metabolite to gene - mapping
Richard Friedman
- [BioC] ctc::hc2Newick branch length errors?
Narayanan, Manikandan (NIH/NIAID) [E]
- [BioC] Is GO.db out of date?
Marc Carlson
- [BioC] Quick questions about RCytoscape
Paul Shannon
- [BioC] yieldSize and paired end data in SummarizeOverlaps error?
Valerie Obenchain
- [BioC] yieldSize and paired end data in SummarizeOverlaps error?
Michael Lawrence
- [BioC] yieldSize and paired end data in SummarizeOverlaps error?
Ryan C. Thompson
- [BioC] assignChromosomeRegion in 2.6.0 ChIPpeakAnno
Zhu, Lihua (Julie)
- [BioC] assignChromosomeRegion in 2.6.0 ChIPpeakAnno
Zhu, Lihua (Julie)
- [BioC] assignChromosomeRegion in 2.6.0 ChIPpeakAnno
Stefan Pinter
- [BioC] Gene symbol update.
Jinyan Huang
- [BioC] makeTranscriptDbFromBiomart - chrominfo failure
Stefanie Tauber
- [BioC] assignChromosomeRegion in 2.6.0 ChIPpeakAnno
Zhu, Lihua (Julie)
- [BioC] Difference between EdgeR and DeSeq in library normalization
Lucia Peixoto
- [BioC] assignChromosomeRegion in 2.6.0 ChIPpeakAnno
Stefan Pinter
- [BioC] yieldSize and paired end data in SummarizeOverlaps error?
Valerie Obenchain
- [BioC] BioC2013, July 18-19 (Developer Day July 17), Seattle: Registration Open
Martin Morgan
- [BioC] yieldSize and paired end data in SummarizeOverlaps error?
Ryan C. Thompson
- [BioC] assignChromosomeRegion in 2.6.0 ChIPpeakAnno
Zhu, Lihua (Julie)
- [BioC] Difference between EdgeR and DeSeq in library normalization
Simon Anders
- [BioC] MCS & ChemineR
Thomas Girke
- [BioC] DESeq pairwise comparisons between conditions within a multi-factor design
Andrew Lysaght
- [BioC] Difference between EdgeR and DeSeq in library normalization
Ryan C. Thompson
- [BioC] R crashes when calling readCelFile in Starr package
Koh, Fong Ming
- [BioC] makeTranscriptDbFromBiomart - chrominfo failure
Marc Carlson
- [BioC] Gene symbol update.
Marc Carlson
- [BioC] Gene symbol update.
Jinyan Huang
- [BioC] Gene symbol update.
Jinyan Huang
- [BioC] R crashes when calling readCelFile in Starr package
Henrik Bengtsson
- [BioC] DESeq pairwise comparisons between conditions within a multi-factor design
Simon Anders
- [BioC] ChIPpeakAnno
Zhu, Lihua (Julie)
- [BioC] Analysis inquiry for Affymetrix Human Exon ST1.0 array
Jeremy Ng
- [BioC] assignChromosomeRegion in 2.6.0 ChIPpeakAnno
Stefan Pinter
- [BioC] assignChromosomeRegion in 2.6.0 ChIPpeakAnno
Zhu, Lihua (Julie)
- [BioC] NCI 60 gene expression status
Alyaa Mahmoud
- [BioC] Can\'t read canine CEL file with ReadAffy()
Kaj Chokeshaiusaha [guest]
- [BioC] Subsampling of BAM/SAM alignments
Julian Gehring
- [BioC] MT reference differences between hg19/GRCH37
Julian Gehring
- [BioC] MT reference differences between hg19/GRCH37
Julian Gehring
- [BioC] assignChromosomeRegion in 2.6.0 ChIPpeakAnno
Stefan Pinter
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Santos [guest]
- [BioC] Question about limma pacakge
Marie DENIS
- [BioC] Fix for queryAE() in the ArrayExpress package
Ibrahim Emam
- [BioC] multiple pairs plot in a single window
Natasha Sahgal
- [BioC] assignChromosomeRegion in 2.6.0 ChIPpeakAnno
Zhu, Lihua (Julie)
- [BioC] ChIPpeakAnno
Zhu, Lihua (Julie)
- [BioC] limma interaction model example
limmauser [guest]
- [BioC] I was wondering if anyone here was using SPP?
Thornton, Matthew
- [BioC] edgeR for data combined from different studies and/or platforms
Ryan C. Thompson
- [BioC] Large logCPM values when using offsets in edgeR for normalization
Ying Wu
- [BioC] edgeR for data combined from different studies and/or platforms
Simon Anders
- [BioC] edgeR for data combined from different studies and/or platforms
Ryan C. Thompson
- [BioC] problem extracting non AFE data with Agi4x44PreProcessing package
Bernal-Mizrachi, Leon
- [BioC] Can\'t read canine CEL file with ReadAffy()
James W. MacDonald
- [BioC] assignChromosomeRegion in 2.6.0 ChIPpeakAnno
Zhu, Lihua (Julie)
- [BioC] limma interaction model example
James W. MacDonald
- [BioC] multiple pairs plot in a single window
James W. MacDonald
- [BioC] Proper use of annotation package
Naxerova, Kamila
- [BioC] Proper use of annotation package
James W. MacDonald
- [BioC] Proper use of annotation package
Naxerova, Kamila
- [BioC] Proper use of annotation package
James W. MacDonald
- [BioC] Distance btw sequences from different sets
Benilton Carvalho
- [BioC] MT reference differences between hg19/GRCH37
Hervé Pagès
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Koh, Fong Ming
- [BioC] edgeR Quasi-likelihood with tagwise dispersion?
Ryan C. Thompson
- [BioC] edgeR Quasi-likelihood with tagwise dispersion?
Gordon K Smyth
- [BioC] Distance btw sequences from different sets
Hervé Pagès
- [BioC] Distance btw sequences from different sets
Kasper Daniel Hansen
- [BioC] Distance btw sequences from different sets
Hervé Pagès
- [BioC] Distance btw sequences from different sets
Benilton Carvalho
- [BioC] Distance btw sequences from different sets
Benilton Carvalho
- [BioC] how to use color to represent significant changed genes in maPlot of edgeR
Wang Peter
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Benilton Carvalho
- [BioC] edgeR Quasi-likelihood with tagwise dispersion?
Ryan C. Thompson
- [BioC] edgeR Quasi-likelihood with tagwise dispersion?
Gordon K Smyth
- some problems of easyRNASeqâ : about the gtf files
Hu Fuyan [guest]
- [BioC] xzfile() cannot open the connection, lzma encoder error 5.
Wang Ming
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Guangchuang Yu
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Wang Ming
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Nicolas Delhomme
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Hu Fuyan [guest]
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Natasha Sahgal
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Santosh Patnaik
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Simon Anders
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James W. MacDonald
- Unable to install package \"CAGEr\" - Warning message: package â CAGErâ is not available (for R version 2.15.3)
Arturo Mora [guest]
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James W. MacDonald
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Dan Tenenbaum
- [BioC] Annotation problem through org.Mm.eg.db
Himanshu Sharma
- [BioC] Error in .testGOFrame(x, organism)
Diwan [guest]
- [BioC] error with retrieving dn and ds using biomart
David Wang
- [BioC] error with retrieving dn and ds using biomart
James W. MacDonald
- [BioC] Error in .testGOFrame(x, organism)
Valerie Obenchain
- [BioC] error with retrieving dn and ds using biomart
David Wang
- Error in .testGOFraâ me(x, organism)
Diwan [guest]
- [BioC] error with retrieving dn and ds using biomart
James W. MacDonald
- [BioC] FW: Annotation problem through org.Mm.eg.db
Himanshu Sharma
- [BioC] edgeR strange normalized factor for RNAseq data
capricy gao
- [BioC] edgeR strange normalized factor for RNAseq data
Mark Robinson
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Dario Strbenac
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capricy gao
- [BioC] ChIPpeakAnno query
Zhu, Lihua (Julie)
- [BioC] ChIPpeakAnno query
Luke Selth
- [BioC] Calculate Outer Positions of GappedAlignmentPairs
Michael Lawrence
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Simon Anders
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konika chawla
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Thomas Maurel
- [BioC] Is GO.db out of date?
Steve Lianoglou
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Arturo
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Paul Shannon
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Zhu, Lihua (Julie)
- [BioC] Applying DESeq on RSEM output
dvir.tau at gmail.com
- [BioC] about expression value generated by SCAN UPC package
gregory voisin
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Michael Love
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Dan Tenenbaum
- [BioC] BiocGenerics 0.5.6 not loading properly
Seb
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Dan Tenenbaum
- [BioC] Calculate Outer Positions of GappedAlignmentPairs
Valerie Obenchain
- [BioC] Is GO.db out of date?
Marc Carlson
- [BioC] BiocGenerics 0.5.6 not loading properly
Seb
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Dan Tenenbaum
- [BioC] Calculate Outer Positions of GappedAlignmentPairs
Michael Lawrence
- [BioC] A question about GWASTools package
Stephanie M. Gogarten
- [BioC] EdgeR vs voom, what to consider when deciding which to use
Lucia Peixoto
- [BioC] Calculate Outer Positions of GappedAlignmentPairs
Hervé Pagès
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Joseph Nalluri [guest]
- [BioC] BiocGenerics 0.5.6 not loading properly
Seb
- [BioC] BiocGenerics 0.5.6 not loading properly
Dan Tenenbaum
- [BioC] BiocGenerics 0.5.6 not loading properly
Seb
- [BioC] Calculate Outer Positions of GappedAlignmentPairs
Hervé Pagès
- [BioC] Calculate Outer Positions of GappedAlignmentPairs
Hervé Pagès
- [BioC] metabolite to gene - mapping
Marc Carlson
- [BioC] nsFilter give error saying \"invalid subscripts type \'list\'\"
Hao [guest]
- [BioC] EdgeR vs voom, what to consider when deciding which to use
Steve Lianoglou
- [BioC] metabolite to gene - mapping
Marc Carlson
- [BioC] Calculate Outer Positions of GappedAlignmentPairs
Michael Lawrence
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Marc Carlson
- [BioC] BiocGenerics 0.5.6 not loading properly
Dan Tenenbaum
- [BioC] BiocGenerics 0.5.6 not loading properly
Seb
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Dan Tenenbaum
- [BioC] DESeq2
Mariana Boroni
- [BioC] Calculate Outer Positions of GappedAlignmentPairs
Dario Strbenac
- [BioC] BiocGenerics 0.5.6 not loading properly
Kasper Daniel Hansen
- [BioC] Testing for no change in RNA-seq data?
Ryan C. Thompson
- [BioC] BiocGenerics 0.5.6 not loading properly
Martin Morgan
- [BioC] Testing for no change in RNA-seq data?
Albyn Jones
- [BioC] BiocGenerics 0.5.6 not loading properly
Kasper Daniel Hansen
- [BioC] Calculate Outer Positions of GappedAlignmentPairs
Kasper Daniel Hansen
- [BioC] (minfi) Return value from dmpFinder
Subhashree
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Ryan C. Thompson
- [BioC] DESeq2
Dan Tenenbaum
- [BioC] Applying DESeq on RSEM output
dvir.tau at gmail.com
- [BioC] Calculate Outer Positions of GappedAlignmentPairs
Michael Lawrence
- [BioC] Fragen zu Gviz
Hahne, Florian
- [BioC] Applying DESeq on RSEM output
Simon Anders
- [BioC] Testing for no change in RNA-seq data?
Simon Anders
- [BioC] (minfi) Return value from dmpFinder
Tim Triche, Jr.
- [BioC] EdgeR: coefficients for GLM for multiple groups
capricy gao
- [BioC] EdgeR: coefficients for GLM for multiple groups
James W. MacDonald
- [BioC] BiocGenerics 0.5.6 not loading properly
Seb
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Kasper Daniel Hansen
- [BioC] EdgeR: coefficients for GLM for multiple groups
capricy gao
- [BioC] GWASTools
Stephanie M. Gogarten
- [BioC] EdgeR: coefficients for GLM for multiple groups
James W. MacDonald
- [BioC] how to operate on a DNAStringSet object
Chris Seidel
- [BioC] EdgeR: coefficients for GLM for multiple groups
capricy gao
- [BioC] cmarrt.peak function does not work
Susan Wilson
- [BioC] how to operate on a DNAStringSet object
Steve Lianoglou
- [BioC] how to operate on a DNAStringSet object
Steve Lianoglou
- [BioC] EdgeR: coefficients for GLM for multiple groups
James W. MacDonald
- [BioC] Testing for no change in RNA-seq data?
Ryan C. Thompson
- [BioC] DAVIDQuery
Grimes Mark
- [BioC] Testing for no change in RNA-seq data?
Ryan C. Thompson
- [BioC] 5000 nodes RCytoscape
Paul Shannon
- [BioC] what is the difference between AssayTechnologies and AssayDomains
Wang Peter
- [BioC] col.summary error in snpStats
Tereza Jezkova - personal
- [BioC] enrichment of GO terms based on input gene list
Reema Singh
- [BioC] DESeq2
Michael Love
- [BioC] col.summary error in snpStats
Vincent Carey
- [BioC] what is the difference between AssayTechnologies and AssayDomains
Steve Lianoglou
- [BioC] Testing for no change in RNA-seq data?
Simon Anders
- [BioC] what is the difference between AssayTechnologies and AssayDomains
Wang Peter
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Deisy Gysi
- [BioC] edgeR: glmLRT test
KJ Lim
- [BioC] edgeR: glmLRT test
James W. MacDonald
- [BioC] what is the difference between AssayTechnologies and AssayDomains
Michl Mond
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Russell Williams
- [BioC] what is the difference between AssayTechnologies and AssayDomains
Wang Peter
- [BioC] edgeR: glmLRT test
KJ Lim
- [BioC] edgeR: glmLRT test
James W. MacDonald
- [BioC] EdgeR: coefficients for GLM for multiple groups
capricy gao
- [BioC] Testing for no change in RNA-seq data?
Ryan C. Thompson
- [BioC] Testing for no change in RNA-seq data?
Ryan C. Thompson
- [BioC] introductory book
washington3 at countermail.com
- [BioC] Multifactor analysis with deseq
Michael Muratet
- [BioC] Multifactor analysis with deseq
Simon Anders
- [BioC] Multifactor analysis with deseq
Simon Anders
- [BioC] slow query
Sean Wang [guest]
- [BioC] A question about the gage package
He, Yiwen (NIH/CIT) [C]
- [BioC] AssignChromosomeRegion in ChIPpeakAnno 2.7.3
Zhu, Lihua (Julie)
- [BioC] slow query
Marc Carlson
- [BioC] DEXSeq html report error
Natasha Sahgal
- [BioC] slow query
Marc Carlson
- [BioC] EdgeR-tophat
Asma rabe
- [BioC] Can\'t read canine CEL file with ReadAffy()
Kaj
- [BioC] how to operate on a DNAStringSet object
Hervé Pagès
- [BioC] how to operate on a DNAStringSet object
Chris Seidel
- [BioC] Large logCPM values when using offsets in edgeR for normalization
Gordon K Smyth
- [BioC] CAMDA 2013 Challenge: Big Data in Life Sciences
CAMDA 2013
- [BioC] introductory book
James W. MacDonald
- [BioC] introductory book
zeynep özkeserli
- [BioC] how to operate on a DNAStringSet object
Steve Lianoglou
- [BioC] WORLDCOMP fake conference
washington3 at countermail.com
- [BioC] enquiry about the limma script
yong li
- [BioC] Visualize metabolic network using table with reactions
Denis Kazakiewicz
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Henrik Bengtsson
- [BioC] Fwd: EdgeR-tophat
Asma rabe
- [BioC] Fwd: EdgeR-tophat
Steve Lianoglou
- [BioC] edgeR: glmLRT test
KJ Lim
- [BioC] DEXSeq html report error
Alejandro Reyes
- [BioC] Applying DESeq on RSEM output
Dvir Netanely
- [BioC] Applying DESeq on RSEM output
Michael Love
- [BioC] EdgeR: coefficients for GLM for multiple groups
Moritz Hess
- [BioC] Subsetting vcf file by subject
Taub, Margaret
- [BioC] Alternative to combineAffybatch
Nicolas Servant
- [BioC] Subsetting vcf file by subject
Valerie Obenchain
- [BioC] cummerBund - how to get splicing events
Adrian Johnson
- [BioC] Visualization of metabolic network in lpSolve format
Denis Kazakiewicz
- [BioC] A question about the gage package
He, Yiwen (NIH/CIT) [C]
- [BioC] A question about the gage package
James W. MacDonald
- [BioC] Background for test in SPIA package.
Ian Sudbery
- [BioC] Multifactor analysis with deseq
Simon Anders
- [BioC] installing Rdisop
Lin [guest]
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Morgan Mouchka
- [BioC] Estimate how much a factor contributes to the variation
Robert Svensen
- [BioC] EdgeR multi-factor design questions
James W. MacDonald
- [BioC] Estimate how much a factor contributes to the variation
Paul Geeleher
- [BioC] Estimate how much a factor contributes to the variation
Hooiveld, Guido
- [BioC] installing Rdisop
Dan Tenenbaum
- [BioC] [Fwd: RE: Rdisop]
Dan Tenenbaum
- [BioC] Multifactor analysis with deseq
Michael Muratet
- [BioC] Multifactor analysis with deseq
Michael Love
- [BioC] BitSeq getExpression crash
Maayan Kreitzman
- [BioC] enquiry about the limma script
Gordon K Smyth
- [BioC] Visualization of metabolic network in lpSolve format
Paul Shannon
- [BioC] Annotating Illumina Mouse Ref8 array in BRB
Tejas Tirodkar
- [BioC] Multifactor analysis with deseq
Michael Love
- [BioC] xps- not being able to load it
Andreia Fonseca
- [BioC] xps- not being able to load it
Steve Lianoglou
- [BioC] Problem loading the "affxparser" dependency of the "oligo" package.
Henrik Bengtsson
- [BioC] Visualization of metabolic network in lpSolve format
Denis Kazakiewicz
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Simone
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Toby Dylan Hocking [guest]
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KJ Lim
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Dario Greco [guest]
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Pawel Eljasz
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Matthew McCall
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David Greber
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Vladimir Morozov
- [BioC] Help with EdgeR running error
Chia Jing Yi
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James W. MacDonald
- [BioC] BitSeq getExpression crash
Peter Glaus
- [BioC] edgeR: glmLRT test
KJ Lim
- [BioC] duplicate 'row.names' are not allowed from biocLite.R
Pawel Eljasz
- [BioC] barcode with custom CDF
Dario Greco
- [BioC] barcode with custom CDF
Matthew McCall
- [BioC] barcode with custom CDF
Hooiveld, Guido
- [BioC] installing Rdisop
C Lin
- [BioC] barcode with custom CDF
Matthew McCall
- [BioC] mzR crashes R
Lin [guest]
- [BioC] mzR crashes R
Laurent Gatto
- [BioC] Error when installing globaltest package
Shields, Rusty (IMS)
- [BioC] Multifactor analysis with deseq
Michael Muratet
- [BioC] (no subject)
Valerie Obenchain
- [BioC] cummerBund - how to get splicing events
Valerie Obenchain
- [BioC] Problem loading the "affxparser" dependency of the "oligo" package.
Russell Williams
- [BioC] Multifactor analysis with deseq
Michael Love
- [BioC] EdgeR: coefficients for GLM for multiple groups
capricy gao
- [BioC] xps- not being able to load it
cstrato
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Dan Tenenbaum
- [BioC] mzR crashes R
Laurent Gatto
- [BioC] mzR crashes R
C Lin
- [BioC] EdgeR multi-factor design questions
Morgan Mouchka
- [BioC] mzR crashes R
Dan Tenenbaum
- [BioC] Question about VennDiagram package
Findley Finseth
- [BioC] Problem loading the "affxparser" dependency of the "oligo" package.
Henrik Bengtsson
- [BioC] unable to load xcms package, Rcpp error
lun wang [guest]
- [BioC] unable to load xcms package, Rcpp error
Steve Lianoglou
- [BioC] unable to load xcms package, Rcpp error
Dan Tenenbaum
- [BioC] sva: No significant surrogate variables
Shraddha Pai
- [BioC] Question about VennDiagram package
Dan Tenenbaum
- [BioC] Question about VennDiagram package
Steve Lianoglou
- [BioC] xps- not being able to load it
Andreia Fonseca
- [BioC] xps- not being able to load it
Andreia Fonseca
- [BioC] Analyzing "differential variability" of methylation (and gene expression)
Pekka Kohonen
- [BioC] two color arrays, LIMMA and GOstats analysis
Andreas Heider
- [BioC] mzR crashes R
C Lin
- [BioC] xps- not being able to load it
cstrato
- [BioC] xps- not being able to load it
Andreia Fonseca
- [BioC] xps- not being able to load it
cstrato
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James W. MacDonald
- [BioC] mzR crashes R
Dan Tenenbaum
- [BioC] xps- not being able to load it
Andreia Fonseca
- [BioC] mzR crashes R
Dan Tenenbaum
- [BioC] mzR crashes R
Laurent Gatto
- [BioC] BED2RangedData
R [guest]
- [BioC] BED2RangedData
Ou, Jianhong
- [BioC] mzR crashes R
Laurent Gatto
- [BioC] BED2RangedData
R
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Morgan Mouchka
- [BioC] xps- not being able to load it
cstrato
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Jan T Kim
- [BioC] mzR crashes R
C Lin
- [BioC] Exon Arrays - GC & how many pm features?
Jonathan Cairns
- [BioC] BED2RangedData
Zhu, Lihua (Julie)
- [BioC] BED2RangedData
Ou, Jianhong
- [BioC] applyPileups invalid times argument error
Mark Dunning
- [BioC] applyPileups invalid times argument error
Martin Morgan
- [BioC] DAVIDQuery
Day, Roger S
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ying chen
- [BioC] BSgenome.Dmelanogaster.UCSC.dm3 package for R 3.0.0 beta?
ying chen
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James W. MacDonald
- [BioC] Analyzing "differential variability" of methylation (and gene expression)
Tim Triche, Jr.
- [BioC] barcode with custom CDF
Steve Piccolo
- [BioC] general question about sample replicates
Fix Ace
- [BioC] BED2RangedData
Michael Lawrence
- [BioC] BED2RangedData
Michael Lawrence
- [BioC] Limit on number of sequence files for forging a BSgenome
Blanchette, Marco
- [BioC] rGADEM crash
Lakshmanan Iyer
- [BioC] rGADEM crash
Dan Tenenbaum
- [BioC] duplicate 'row.names' are not allowed from biocLite.R
Valerie Obenchain
- [BioC] duplicate 'row.names' are not allowed from biocLite.R
Dan Tenenbaum
- [BioC] Limit on number of sequence files for forging a BSgenome
Kasper Daniel Hansen
- [BioC] shared object ‘mzR.so’ not found after mzR update
Alejandra Gonzalez-Beltran
- [BioC] shared object ‘mzR.so’ not found after mzR update
Steve Lianoglou
- [BioC] shared object ‘mzR.so’ not found after mzR update
Alejandra Gonzalez-Beltran
- [BioC] Heatmaps for Agilent Single Color 4x44k using limma and vsn.
Cornish, Joseph (NIH/NIAID) [F]
- [BioC] Heatmaps for Agilent Single Color 4x44k using limma and vsn.
James W. MacDonald
- [BioC] Heatmaps for Agilent Single Color 4x44k using limma and vsn.
Cornish, Joseph (NIH/NIAID) [F]
- [BioC] Heatmaps for Agilent Single Color 4x44k using limma and vsn.
Sean Davis
- [BioC] Heatmaps for Agilent Single Color 4x44k using limma and vsn.
James W. MacDonald
- [BioC] Heatmaps for Agilent Single Color 4x44k using limma and vsn.
Cornish, Joseph (NIH/NIAID) [F]
- [BioC] analysis of HuGene2.0-st array affymetrix -aroma package
Andreia Fonseca
- [BioC] Heatmaps for Agilent Single Color 4x44k using limma and vsn.
Sean Davis
- [BioC] Interpreting DESeq2 results
Michael Muratet
- [BioC] identifying drosophila miRNA targets
Fiona Ingleby
- [BioC] identifying drosophila miRNA targets
James W. MacDonald
- [BioC] Limit on number of sequence files for forging a BSgenome
Blanchette, Marco
- [BioC] [R] Error in setMethod("combine"... was - Error when installing globaltest package
Shields, Rusty (IMS)
- [BioC] [R] Error in setMethod("combine"... was - Error when installing globaltest package
Martin Morgan
- [BioC] [R] Error in setMethod("combine"... was - Error when installing globaltest package
Shields, Rusty (IMS)
- [BioC] Interpreting DESeq2 results
Michael Love
- [BioC] Interpreting DESeq2 results
somnath bandyopadhyay
- [BioC] Problems in running easyRNASeq
pepap
- [BioC] diffbind
Rory Stark
- [BioC] simple ggplot
R [guest]
- [BioC] simple ggplot
Sean Davis
- [BioC] identifying drosophila miRNA targets
Fiona Ingleby
- [BioC] ChIPpeakAnno
Zhu, Lihua (Julie)
- [BioC] Bioconductor Digest, Vol 121, Issue 29
Thornton, Matthew
- [BioC] GO terms: Annotation for HumanMethylation450
Fabrice Tourre
- [BioC] GO terms: Annotation for HumanMethylation450
Tim Triche, Jr.
- [BioC] rGADEM crash
Lakshmanan Iyer
- [BioC] GO terms: Annotation for HumanMethylation450
Fabrice Tourre
- [BioC] identifying drosophila miRNA targets
James W. MacDonald
- [BioC] Limit on number of sequence files for forging a BSgenome
Blanchette, Marco
- [BioC] Limit on number of sequence files for forging a BSgenome
Cook, Malcolm
- [BioC] identifying drosophila miRNA targets
James W. MacDonald
- [BioC] .::Gregory Gentlemen::.
Gregory Gentlemen
- [BioC] subscript out of bounds in makeAnnDbPkg function
Wang Peter
- [BioC] list submission
Edmundo Vega
- [BioC] IlluminaHumanMethylation450kprobe for nearest TSS calculation question
Tim Triche, Jr.
Last message date:
Sun Mar 31 22:16:54 CEST 2013
Archived on: Sun Mar 31 22:17:39 CEST 2013
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