[BioC] anova like test in edgeR

Gordon K Smyth smyth at wehi.EDU.AU
Wed Mar 13 01:27:50 CET 2013

> Date: Mon, 11 Mar 2013 17:18:09 -0700 (PDT)
> From: Luis alberto Martinez lopez <lewisluis2013 at yahoo.com>
> To: "bioconductor at r-project.org" <bioconductor at r-project.org>
> Subject: [BioC] anova like test in edgeR
> Hello everyone:
> a wish to know if there is one way of doing an anova like test in edgeR, 
> comparing all the possibilities between the groups defined in the 
> experimental design.
> in the users guide the authors explain one way anova test, but the 
> comparison is done only against the intercept group, is there a way of 
> doing a general test comparing all the posibilities and not only against 
> the intercept?

The example in the User's Guide is a general test comparing all 

Best wishes

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