[BioC] anova like test in edgeR

[Gordon K Smyth]

The example is in Section 3.2.5, which is titled "An ANOVA-like test for 
any differences".

Gordon

> Date: Mon, 11 Mar 2013 17:18:09 -0700 (PDT)
> From: Luis alberto Martinez lopez <lewisluis2013 at yahoo.com>
> To: "bioconductor at r-project.org" <bioconductor at r-project.org>
> Subject: [BioC] anova like test in edgeR
>
> Hello everyone:
>
> a wish to know if there is one way of doing an anova like test in edgeR, 
> comparing all the possibilities between the groups defined in the 
> experimental design.
>
> in the users guide the authors explain one way anova test, but the 
> comparison is done only against the intercept group, is there a way of 
> doing a general test comparing all the posibilities and not only against 
> the intercept?

The example in the User's Guide is a general test comparing all 
possibilities.

Best wishes
Gordon

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