[BioC] Is it possible to get SRA sample attributes for a given sample or experiment ID?

[Vladimir Morozov]

Hi,

Is it possible to get SRA sample attributes for a given sample or experiment ID?
Here is the sample http://www.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?sample=SRS388155.
With SRAdb package:
> dbGetQuery(sra_con,"select * from sample where sample_accession = 'SRS388155' ")
  sample_ID sample_alias sample_accession broker_name center_name taxon_id
1    354784         <NA>        SRS388155        <NA>        <NA>       NA
  scientific_name common_name anonymized_name individual_name description
1            <NA>        <NA>            <NA>            <NA>        <NA>
  sra_link sample_url_link xref_link sample_entrez_link ddbj_link ena_link
1     <NA>            <NA>      <NA>               <NA>      <NA>     <NA>
  sample_attribute submission_accession       sradb_updated
1             <NA>            SRA065858 2013-02-16 20:06:43

getSRA (search_terms ='SOD1_G93A',out_types=c('sample','experiment','run'), sra_con=sra_con)#
return 0 rows.

Any suggestions?

Thanks
Vlad





***************************************************************************************
The information contained in this electronic message is ...{{dropped:18}}