[BioC] make check with Biobase 2.18.0

Dan Tenenbaum dtenenba at fhcrc.org
Fri Mar 8 20:57:27 CET 2013


On Fri, Mar 8, 2013 at 11:53 AM, Nigel Horne <nigel_horne at hotmail.com> wrote:
>
>
>
>
>
>
>
>
> Folks,
>
>
> I'm new to biobase and have been asked to install it on behalf of a
> programmer.
>
>
> The checking stage is failing with the following error:
>
>
> ### Name: cache
> ### Title: Evaluate an expression if its value is not already cached.
> ### Aliases: cache
> ### Keywords: manip array
>
>
> ### ** Examples
>
>
>      bigCalc <- function() runif(10)
>      cache(myComplicatedObject <- bigCalc())
> Error in file.path(dir, paste0(prefix, name, ".RData")) :
>   could not find function "paste0"
>
>
>
>
> What is wrong and how do I fix it?  This is on CentOS6.3.
> Sorry if you've seen more than one copy of this, but I don't know that my postings are getting through so I'm now trying with a different e-mail address.
>

Can you send your sessionInfo()?

My guess is your version of R is too old--Biobase 2.18.0 requires R 2.15.

Dan



>
> Regards,
>
>
> -Nigel
>
>
> --
> Nigel Horne (NIH, Bethesda, MD, USA)
> http://www.ncbi.nlm.nih.gov/
>         [[alternative HTML version deleted]]
>
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at r-project.org
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor



More information about the Bioconductor mailing list