[BioC] options on outputing gene expression based on gene level instead of probe set level for justRMA

[James W. MacDonald]

Hi Jack,

On 3/6/2013 11:48 AM, Jack Luo wrote:
> Hi,
>
> I am trying to RMA normalize a bunch of cel files and output the gene

A bunch of cel files of what Array type?


> expression matrix to gene level (instead of probe set level), is there any
> option in justRMA that can do this (or any other function that can do
> this?) I searched the options on justRMA, does not seem to have this
> option.
>
> Thanks,
>
> -Jack
>
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-- 
James W. MacDonald, M.S.
Biostatistician
University of Washington
Environmental and Occupational Health Sciences
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Seattle WA 98105-6099