[BioC] installing Rdisop
dtenenba at fhcrc.org
Mon Mar 25 22:01:41 CET 2013
On Mon, Mar 25, 2013 at 12:05 PM, Lin [guest] <guest at bioconductor.org> wrote:
> I am trying to install Rdisop but got the following error which I thought meant the package was looking for older version of Rcpp that is not there anymore. Anyone knows how to fix this? Thank you.
> BioC_mirror: http://bioconductor.org
> Using R version 2.15, BiocInstaller version 1.4.9.
> Installing package(s) 'Rdisop'
> also installing the dependency â€˜Rcppâ€™
> trying URL 'http://cran.fhcrc.org/bin/windows/contrib/2.15/Rcpp_0.10.2.zip'
> Error in download.file(url, destfile, method, mode = "wb", ...) :
> cannot open URL 'http://cran.fhcrc.org/bin/windows/contrib/2.15/Rcpp_0.10.2.zip'
Start with a fresh R session.
You should be getting Rcpp_0.10.3, not 0.10.2.
In a fresh R session, type:
If that works, try
If it doesn't work, send us the output of your commands.
> In addition: Warning message:
> In download.file(url, destfile, method, mode = "wb", ...) :
> cannot open: HTTP status was '404 Not Found'
> Warning in download.packages(pkgs, destdir = tmpd, available = available, :
> download of package â€˜Rcppâ€™ failed
> trying URL 'http://bioconductor.org/packages/2.10/bioc/bin/windows/contrib/2.15/Rdisop_1.16.0.zip'
> Content type 'application/zip' length 923472 bytes (901 Kb)
> opened URL
> downloaded 901 Kb
> package â€˜Rdisopâ€™ successfully unpacked and MD5 sums checked
> Loading required package: RcppClassic
> Error in gzfile(file, "rb") : cannot open the connection
> -- output of sessionInfo():
> R version 2.15.1 (2012-06-22)
> Platform: x86_64-pc-mingw32/x64 (64-bit)
>  LC_COLLATE=English_United States.1252
>  LC_CTYPE=English_United States.1252
>  LC_MONETARY=English_United States.1252
>  LC_NUMERIC=C
>  LC_TIME=English_United States.1252
> attached base packages:
>  grDevices datasets splines graphics stats tcltk utils
>  methods base
> other attached packages:
>  svSocket_0.9-54 TinnR_1.0-5 R2HTML_2.2 Hmisc_3.9-3
>  survival_2.36-14
> loaded via a namespace (and not attached):
>  cluster_1.14.2 grid_2.15.1 lattice_0.20-6 svMisc_0.9-68 tools_2.15.1
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