[BioC] installing Rdisop

Lin [guest] guest at bioconductor.org
Mon Mar 25 20:05:41 CET 2013


I am trying to install Rdisop but got the following error which I thought meant the package was looking for older version of Rcpp that is not there anymore. Anyone knows how to fix this? Thank you.

>     source("http://bioconductor.org/biocLite.R")
>     biocLite("Rdisop")
BioC_mirror: http://bioconductor.org
Using R version 2.15, BiocInstaller version 1.4.9.
Installing package(s) 'Rdisop'
also installing the dependency ‘Rcpp’

trying URL 'http://cran.fhcrc.org/bin/windows/contrib/2.15/Rcpp_0.10.2.zip'
Error in download.file(url, destfile, method, mode = "wb", ...) : 
  cannot open URL 'http://cran.fhcrc.org/bin/windows/contrib/2.15/Rcpp_0.10.2.zip'
In addition: Warning message:
In download.file(url, destfile, method, mode = "wb", ...) :
  cannot open: HTTP status was '404 Not Found'
Warning in download.packages(pkgs, destdir = tmpd, available = available,  :
  download of package ‘Rcpp’ failed
trying URL 'http://bioconductor.org/packages/2.10/bioc/bin/windows/contrib/2.15/Rdisop_1.16.0.zip'
Content type 'application/zip' length 923472 bytes (901 Kb)
opened URL
downloaded 901 Kb

package ‘Rdisop’ successfully unpacked and MD5 sums checked

> library(Rdisop)
Loading required package: RcppClassic
Error in gzfile(file, "rb") : cannot open the connection

 -- output of sessionInfo(): 

R version 2.15.1 (2012-06-22)
Platform: x86_64-pc-mingw32/x64 (64-bit)

[1] LC_COLLATE=English_United States.1252 
[2] LC_CTYPE=English_United States.1252   
[3] LC_MONETARY=English_United States.1252
[4] LC_NUMERIC=C                          
[5] LC_TIME=English_United States.1252    

attached base packages:
[1] grDevices datasets  splines   graphics  stats     tcltk     utils    
[8] methods   base     

other attached packages:
[1] svSocket_0.9-54  TinnR_1.0-5      R2HTML_2.2       Hmisc_3.9-3     
[5] survival_2.36-14

loaded via a namespace (and not attached):
[1] cluster_1.14.2 grid_2.15.1    lattice_0.20-6 svMisc_0.9-68  tools_2.15.1

Sent via the guest posting facility at bioconductor.org.

More information about the Bioconductor mailing list