[BioC] cummerBund - how to get splicing events

[Valerie Obenchain]

Adrian,

Please provide more information about what you have tried and what you 
want to do. Which cummerBund vignette are you following (User Guide or 
Workflow)? It looks like Workflow section 7 is intended to cover 
differential splicing. Is this what you are interested in?

Valerie

On 03/25/2013 10:24 AM, Adrian Johnson wrote:
> Hi:
>
> In sample 1 (where 4 different conditions were analyzed using
> cufflinks), using cummberbund, how to get significant number of
> splicing events? Any other way to do this. Appreciate your help!
>
> thanks
> Adrian
>
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