[BioC] Question: type of NOISeq package input file

Chuanbao [guest] guest at bioconductor.org
Sun Mar 3 04:05:07 CET 2013

I got a table of RNAseq data with RPKM values. Can I use it directly as the input file of NOISeq package instead of the read counts?

Many thanks!

 -- output of sessionInfo(): 

R version 2.15.2 (2012-10-26)
Platform: i386-w64-mingw32/i386 (32-bit)

[1] LC_COLLATE=English_United States.1252 
[2] LC_CTYPE=English_United States.1252   
[3] LC_MONETARY=English_United States.1252
[4] LC_NUMERIC=C                          
[5] LC_TIME=English_United States.1252    

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] NOISeq_1.1.5       Biobase_2.18.0     BiocGenerics_0.4.0

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