[BioC] Unable to install package \"CAGEr\" - Warning message: package ā CAGErā is not available (for R version 2.15.3)

Dan Tenenbaum dtenenba at fhcrc.org
Tue Mar 19 15:54:31 CET 2013


On Tue, Mar 19, 2013 at 7:35 AM, Arturo Mora [guest]
<guest at bioconductor.org> wrote:
>
> Hello,
>
> I am currently trying to install package "CAGEr" with the described commands but I got the following errors:
>
>> source("http://bioconductor.org/biocLite.R")
>> biocLite("CAGEr")
> BioC_mirror: http://bioconductor.org
> Using Bioconductor version 2.11 (BiocInstaller 1.8.3), R version 2.15.
> Installing package(s) 'CAGEr'
> Warning message:
> package ‘CAGEr’ is not available (for R version 2.15.3)
>
> I also tried doing:
> install.packages("CAGEr", repos = "http://bioconductor.org/biocLite.R")
> Warning: unable to access index for repository http://bioconductor.org/biocLite.R/bin/macosx/leopard/contrib/2.15
> Warning message:
> package ‘CAGEr’ is not available (for R version 2.15.3)
>
> Your help will be greatly appreciated.
> Regards,
> Arturo
>
>  -- output of sessionInfo():
>
>> sessionInfo()
> R version 2.15.3 (2013-03-01)
> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
>
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>
> attached base packages:
> [1] stats     graphics  grDevices utils     datasets  methods   base
>
> other attached packages:
> [1] BiocInstaller_1.8.3
>
> loaded via a namespace (and not attached):
> [1] tools_2.15.3
>
>

This package was added to Bioconductor 2.12 and you are using
Bioconductor 2.11. You can wait for 2.12 to be released in a few
weeks, or install it as the devel version:

http://bioconductor.org/developers/useDevel/

Dan


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