April 2016 Archives by author

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Starting: Fri Apr 1 00:38:08 CEST 2016
Ending: Sat Apr 30 13:05:22 CEST 2016
Messages: 242

• [Bioc-devel] gage fails to build on Windows in devel   Monther Alhamdoosh
• [Bioc-devel] moscato2 Windows build error reading IDAT file   Henrik Bengtsson
• [Bioc-devel] moscato2 Windows build error reading IDAT file   Henrik Bengtsson
• [Bioc-devel] SVN credentials   Krithika Bhuvaneshwar
• [Bioc-devel] SVN credentials   Krithika Bhuvaneshwar
• [Bioc-devel] need advice on how to fix build error in windows   Krithika Bhuvaneshwar
• [Bioc-devel] git-svn-mirror problem committing   Hector Corrada Bravo
• [Bioc-devel] Spurious errors unit testing on R CMD check   Hector Corrada Bravo
• [Bioc-devel] Spurious errors unit testing on R CMD check   Hector Corrada Bravo
• [Bioc-devel] Feedback on OrganismDb development   Vincent Carey
• [Bioc-devel] Feedback on OrganismDb development   Vincent Carey
• [Bioc-devel] OpenMP on OS X   Vincent Carey
• [Bioc-devel] Bioc-devel Digest, Vol 145, Issue 60   Vincent Carey
• [Bioc-devel] Bioc-devel Digest, Vol 145, Issue 60   Vincent Carey
• [Bioc-devel] Support site unavailable   Robert Castelo
• [Bioc-devel] Bioc-devel Digest, Vol 145, Issue 60   Aedin Culhane
• [Bioc-devel] Bioc-devel Digest, Vol 145, Issue 60   Aedin Culhane
• [Bioc-devel] Build fails on windows: R_igraph_make_weak_ref not available   Ramon Diaz-Uriarte
• [Bioc-devel] Build fails on windows: R_igraph_make_weak_ref not available   Ramon Diaz-Uriarte
• [Bioc-devel] Build fails on windows: R_igraph_make_weak_ref not available: II   Ramon Diaz-Uriarte
• [Bioc-devel] dropping perceval and petty from supported platforms   Ramon Diaz-Uriarte
• [Bioc-devel] update versions for 3.3 with to deal with new testthat   Ramon Diaz-Uriarte
• [Bioc-devel] update versions for 3.3 with to deal with new testthat   Ramon Diaz-Uriarte
• [Bioc-devel] update versions for 3.3 with to deal with new testthat   Ramon Diaz-Uriarte
• [Bioc-devel] some new warnings in a package   Ramon Diaz-Uriarte
• [Bioc-devel] some new warnings in a package   Ramon Diaz-Uriarte
• [Bioc-devel] rhdf5 and left-justified output in h5ls - is this sensible?   Fischer, Bernd
• [Bioc-devel] Zenodo DOIs for packages released (every 6 months, tied to the Bioc release)   Laurent Gatto
• [Bioc-devel] Build error on Moscato2 for mzR   Laurent Gatto
• [Bioc-devel] ggbio error   Ludwig Geistlinger
• [Bioc-devel] Feedback on OrganismDb development   Ludwig Geistlinger
• [Bioc-devel] build reports are not updated   Ludwig Geistlinger
• [Bioc-devel] new visualization technique   David Gibbs
• [Bioc-devel] new Windows toolchain for R-3.3.0   Kasper Daniel Hansen
• [Bioc-devel] new Windows toolchain for R-3.3.0   Kasper Daniel Hansen
• [Bioc-devel] need advice on how to fix build error in windows   Kasper Daniel Hansen
• [Bioc-devel] moscato2 Windows build error reading IDAT file   Kasper Daniel Hansen
• [Bioc-devel] package submission - problem with vignette   Kasper Daniel Hansen
• [Bioc-devel] moscato2 Windows build error reading IDAT file   Kasper Daniel Hansen
• [Bioc-devel] update versions for 3.3 with to deal with new testthat   Kasper Daniel Hansen
• [Bioc-devel] Build error on Moscato2 for mzR   Kasper Daniel Hansen
• [Bioc-devel] Vignettes and package size   Kasper Daniel Hansen
• [Bioc-devel] System Requirements for imported packages   Kasper Daniel Hansen
• [Bioc-devel] Custom build of packages   Kasper Daniel Hansen
• [Bioc-devel] avoiding clashes of different S4 methods with the same generic   Kasper Daniel Hansen
• [Bioc-devel] SVN and GitHub mirror out-of-sync   Peter Hickey
• [Bioc-devel] SVN and GitHub mirror out-of-sync   Peter Hickey
• [Bioc-devel] not yet updated package sources/binaries in devel   Maarten van Iterson
• [Bioc-devel] Using Git with Bioconductor SVN repositories   Maarten van Iterson
• [Bioc-devel] moscato2 Windows build error reading IDAT file   Maarten van Iterson
• [Bioc-devel] moscato2 Windows build error reading IDAT file   Maarten van Iterson
• [Bioc-devel] moscato2 Windows build error reading IDAT file   Maarten van Iterson
• [Bioc-devel] Package Without a Vignette   Zhilong Jia
• [Bioc-devel] Package Without a Vignette   Zhilong Jia
• [Bioc-devel] Package Without a Vignette   Zhilong Jia
• [Bioc-devel] Making transcriptLength function a method in GenomicFeatures?   Rainer Johannes
• [Bioc-devel] Update of data packages in RTCGA Family/Factory of R Packages   Marcin Kosiński
• [Bioc-devel] Update of data packages in RTCGA Family/Factory of R Packages   Marcin Kosiński
• [Bioc-devel] Update of data packages in RTCGA Family/Factory of R Packages   Marcin Kosiński
• [Bioc-devel] BiocCheck Local and Single Package Builder Discrepancy   David Kuo
• [Bioc-devel] namespace question   Michael Lawrence
• [Bioc-devel] namespace question   Michael Lawrence
• [Bioc-devel] namespace question   Michael Lawrence
• [Bioc-devel] ggbio error   Michael Lawrence
• [Bioc-devel] namespace question   Michael Lawrence
• [Bioc-devel] namespace question   Michael Lawrence
• [Bioc-devel] namespace question   Michael Lawrence
• [Bioc-devel] namespace question   Michael Lawrence
• [Bioc-devel] namespace question   Michael Lawrence
• [Bioc-devel] import except on Window Machine   Michael Lawrence
• [Bioc-devel] import except on Window Machine   Michael Lawrence
• [Bioc-devel] import except on Window Machine   Michael Lawrence
• [Bioc-devel] Found more than one class "Annotated" in cache   Michael Lawrence
• [Bioc-devel] Found more than one class "Annotated" in cache   Michael Lawrence
• [Bioc-devel] avoiding clashes of different S4 methods with the same generic   Michael Lawrence
• [Bioc-devel] avoiding clashes of different S4 methods with the same generic   Michael Lawrence
• [Bioc-devel] avoiding clashes of different S4 methods with the same generic   Michael Lawrence
• [Bioc-devel] avoiding clashes of different S4 methods with the same generic   Michael Lawrence
• [Bioc-devel] Found more than one class "Annotated" in cache   Michael Lawrence
• [Bioc-devel] Spurious errors unit testing on R CMD check   Michael Lawrence
• [Bioc-devel] Spurious errors unit testing on R CMD check   Michael Lawrence
• [Bioc-devel] Spurious errors unit testing on R CMD check   Michael Lawrence
• [Bioc-devel] New package submission   Thomas Lawson
• [Bioc-devel] linking stage excessive runtime issue on windows (was: New package submission)   Thomas Lawson
• [Bioc-devel] linking stage excessive runtime issue on windows (was: New package submission)   Thomas Lawson
• [Bioc-devel] rhdf5 and left-justified output in h5ls - is this sensible?   Aaron Lun
• [Bioc-devel] rbind'ing for SummarizedExperiment with no rows   Aaron Lun
• [Bioc-devel] rhdf5 and left-justified output in h5ls - is this sensible?   Aaron Lun
• [Bioc-devel] avoiding clashes of different S4 methods with the same generic   Aaron Lun
• [Bioc-devel] avoiding clashes of different S4 methods with the same generic   Aaron Lun
• [Bioc-devel] avoiding clashes of different S4 methods with the same generic   Aaron Lun
• [Bioc-devel] can't find an annotation package   Giorgio Melloni
• [Bioc-devel] namespace question   Karim Mezhoud
• [Bioc-devel] 49 software packages either have no vignettes or their vignettes are not built by R CMD build!   Karim Mezhoud
• [Bioc-devel] 49 software packages either have no vignettes or their vignettes are not built by R CMD build!   Karim Mezhoud
• [Bioc-devel] 49 software packages either have no vignettes or their vignettes are not built by R CMD build!   Karim Mezhoud
• [Bioc-devel] 49 software packages either have no vignettes or their vignettes are not built by R CMD build!   Karim Mezhoud
• [Bioc-devel] 49 software packages either have no vignettes or their vignettes are not built by R CMD build!   Karim Mezhoud
• [Bioc-devel] big file ReactomeFI --> bioC annotate package   Karim Mezhoud
• [Bioc-devel] namespace question   Karim Mezhoud
• [Bioc-devel] namespace question   Karim Mezhoud
• [Bioc-devel] namespace question   Karim Mezhoud
• [Bioc-devel] big file ReactomeFI --> bioC annotate package   Karim Mezhoud
• [Bioc-devel] annotate package not need vignette?   Karim Mezhoud
• [Bioc-devel] new package: annotate function interaction from Reactome DB   Karim Mezhoud
• [Bioc-devel] namespace question   Karim Mezhoud
• [Bioc-devel] mascato2 check error   Karim Mezhoud
• [Bioc-devel] import except on Window Machine   Karim Mezhoud
• [Bioc-devel] import except on Window Machine   Karim Mezhoud
• [Bioc-devel] import except on Window Machine   Karim Mezhoud
• [Bioc-devel] package submission - problem with vignette   Karim Mezhoud
• [Bioc-devel] package submission - problem with vignette   Karim Mezhoud
• [Bioc-devel] SVN credentials   Martin Morgan
• [Bioc-devel] namespace question   Martin Morgan
• [Bioc-devel] new package: annotate function interaction from Reactome DB   Martin Morgan
• [Bioc-devel] OpenMP on OS X   Martin Morgan
• [Bioc-devel] Bioconductor Core Team: Web / System Administrator   Martin Morgan
• [Bioc-devel] Update of data packages in RTCGA Family/Factory of R Packages   Martin Morgan
• [Bioc-devel] Vignettes and package size   Martin Morgan
• [Bioc-devel] System Requirements for imported packages   Martin Morgan
• [Bioc-devel] Bioc-devel Digest, Vol 145, Issue 60   Martin Morgan
• [Bioc-devel] question about transfering maintenance role   Martin Morgan
• [Bioc-devel] Custom build of packages   Morgan, Martin
• [Bioc-devel] Found more than one class "Annotated" in cache   Martin Morgan
• [Bioc-devel] Support site unavailable   Martin Morgan
• [Bioc-devel] Support site unavailable   Martin Morgan
• [Bioc-devel] avoiding clashes of different S4 methods with the same generic   Martin Morgan
• [Bioc-devel] avoiding clashes of different S4 methods with the same generic   Martin Morgan
• [Bioc-devel] build reports are not updated   Martin Morgan
• [Bioc-devel] avoiding clashes of different S4 methods with the same generic   Martin Morgan
• [Bioc-devel] some new warnings in a package   Martin Morgan
• [Bioc-devel] updated BridgeDbR package   Martin Morgan
• [Bioc-devel] Bioconductor 3.3 release schedule has been updated to reflect R release delay   Steffen Neumann
• [Bioc-devel] Bioconductor 3.3 release schedule has been updated to reflect R release delay   Steffen Neumann
• [Bioc-devel] Build error on Moscato2 for mzR   Steffen Neumann
• [Bioc-devel] linking stage excessive runtime issue on windows (was: New package submission)   Steffen Neumann
• [Bioc-devel] Custom build of packages   Steffen Neumann
• [Bioc-devel] Custom build of packages   Steffen Neumann
• [Bioc-devel] readVcf appears to cause Windows i386 check error   Obenchain, Valerie
• [Bioc-devel] big file ReactomeFI --> bioC annotate package   Obenchain, Valerie
• [Bioc-devel] big file ReactomeFI --> bioC annotate package   Obenchain, Valerie
• [Bioc-devel] Feedback on OrganismDb development   Obenchain, Valerie
• [Bioc-devel] Feedback on OrganismDb development   Obenchain, Valerie
• [Bioc-devel] Bioconductor 3.3 release: annotation summary   Obenchain, Valerie
• [Bioc-devel] Feedback on OrganismDb development   Obenchain, Valerie
• [Bioc-devel] updated BridgeDbR package   Obenchain, Valerie
• [Bioc-devel] build reports are not updated   Andrzej Oleś
• [Bioc-devel] Can not commit to bioconductor   Ou, Jianhong
• [Bioc-devel] Can not commit to bioconductor   Ou, Jianhong
• [Bioc-devel] namespace question   Hervé Pagès
• [Bioc-devel] namespace question   Hervé Pagès
• [Bioc-devel] rbind'ing for SummarizedExperiment with no rows   Hervé Pagès
• [Bioc-devel] import except on Window Machine   Hervé Pagès
• [Bioc-devel] avoiding clashes of different S4 methods with the same generic   Hervé Pagès
• [Bioc-devel] avoiding clashes of different S4 methods with the same generic   Hervé Pagès
• [Bioc-devel] avoiding clashes of different S4 methods with the same generic   Hervé Pagès
• [Bioc-devel] can't find an annotation package   Hervé Pagès
• [Bioc-devel] Build error on Moscato2 for mzR   Blattmann Peter
• [Bioc-devel] build problem in package GSAR   Rahmatallah, Yasir
• [Bioc-devel] build problem in package GSAR   Rahmatallah, Yasir
• [Bioc-devel] readVcf appears to cause Windows i386 check error   Riester, Markus
• [Bioc-devel] Custom build of packages   Ruiz Arenas, Carlos
• [Bioc-devel] Custom build of packages   Ruiz Arenas, Carlos
• [Bioc-devel] Custom build of packages   Ruiz Arenas, Carlos
• [Bioc-devel] FDR estimation for Biological ChIP-Seq replicate in the context of GRanges.   Jurat Shayidin
• [Bioc-devel] Question: set purification test for overlapped regions between three GRanges object   Jurat Shayidin
• [Bioc-devel] System Requirements for imported packages   Zach Skidmore
• [Bioc-devel] Question: set purification test for overlapped regions between three GRanges object   Michael Stadler
• [Bioc-devel] R CMD CHECK error in examples   Karl Stamm
• [Bioc-devel] OpenMP on OS X   Aaron Taudt
• [Bioc-devel] OpenMP on OS X   Aaron Taudt
• [Bioc-devel] Build fails on windows: R_igraph_make_weak_ref not available   Dan Tenenbaum
• [Bioc-devel] new Windows toolchain for R-3.3.0   Dan Tenenbaum
• [Bioc-devel] Build fails on windows: R_igraph_make_weak_ref not available   Dan Tenenbaum
• [Bioc-devel] 49 software packages either have no vignettes or their vignettes are not built by R CMD build!   Dan Tenenbaum
• [Bioc-devel] Build fails on windows: R_igraph_make_weak_ref not available: II   Dan Tenenbaum
• [Bioc-devel] 49 software packages either have no vignettes or their vignettes are not built by R CMD build!   Dan Tenenbaum
• [Bioc-devel] R CMD CHECK error in examples   Dan Tenenbaum
• [Bioc-devel] BiocCheck Local and Single Package Builder Discrepancy   Dan Tenenbaum
• [Bioc-devel] 49 software packages either have no vignettes or their vignettes are not built by R CMD build!   Dan Tenenbaum
• [Bioc-devel] Can not commit to bioconductor   Dan Tenenbaum
• [Bioc-devel] build problem in package GSAR   Dan Tenenbaum
• [Bioc-devel] build problem in package GSAR   Dan Tenenbaum
• [Bioc-devel] ggbio error   Dan Tenenbaum
• [Bioc-devel] SVN credentials   Dan Tenenbaum
• [Bioc-devel] namespace question   Dan Tenenbaum
• [Bioc-devel] Package Without a Vignette   Dan Tenenbaum
• [Bioc-devel] Package Without a Vignette   Dan Tenenbaum
• [Bioc-devel] Package Without a Vignette   Dan Tenenbaum
• [Bioc-devel] dropping perceval and petty from supported platforms   Dan Tenenbaum
• [Bioc-devel] readVcf appears to cause Windows i386 check error   Dan Tenenbaum
• [Bioc-devel] Bioconductor 3.3 release schedule has been updated to reflect R release delay   Dan Tenenbaum
• [Bioc-devel] readVcf appears to cause Windows i386 check error   Dan Tenenbaum
• [Bioc-devel] Bioconductor 3.3 release schedule has been updated to reflect R release delay   Dan Tenenbaum
• [Bioc-devel] namespace question   Dan Tenenbaum
• [Bioc-devel] annotate package not need vignette?   Dan Tenenbaum
• [Bioc-devel] Build error on Moscato2   Dan Tenenbaum
• [Bioc-devel] need advice on how to fix build error in windows   Dan Tenenbaum
• [Bioc-devel] mascato2 check error   Dan Tenenbaum
• [Bioc-devel] moscato2 Windows build error reading IDAT file   Dan Tenenbaum
• [Bioc-devel] import except on Window Machine   Dan Tenenbaum
• [Bioc-devel] package submission - problem with vignette   Dan Tenenbaum
• [Bioc-devel] package submission - problem with vignette   Dan Tenenbaum
• [Bioc-devel] import except on Window Machine   Dan Tenenbaum
• [Bioc-devel] import except on Window Machine   Dan Tenenbaum
• [Bioc-devel] import except on Window Machine   Dan Tenenbaum
• [Bioc-devel] Using Git with Bioconductor SVN repositories   Dan Tenenbaum
• [Bioc-devel] moscato2 Windows build error reading IDAT file   Dan Tenenbaum
• [Bioc-devel] update versions for 3.3 with to deal with new testthat   Dan Tenenbaum
• [Bioc-devel] SVN and GitHub mirror out-of-sync   Dan Tenenbaum
• [Bioc-devel] git-svn-mirror problem committing   Dan Tenenbaum
• [Bioc-devel] linking stage excessive runtime issue on windows (was: New package submission)   Dan Tenenbaum
• [Bioc-devel] linking stage excessive runtime issue on windows (was: New package submission)   Dan Tenenbaum
• [Bioc-devel] gage fails to build on Windows in devel   Dan Tenenbaum
• [Bioc-devel] prebs failing in devel   Dan Tenenbaum
• [Bioc-devel] Updating package NEWS files for Bioconductor 3.3 release announcement (and biocViews)   Dan Tenenbaum
• [Bioc-devel] can't find an annotation package   Dan Tenenbaum
• [Bioc-devel] Feedback on OrganismDb development   Tim Triche, Jr.
• [Bioc-devel] Feedback on OrganismDb development   Tim Triche, Jr.
• [Bioc-devel] ggbio error   Leonardo Collado Torres
• [Bioc-devel] FDR estimation for Biological ChIP-Seq replicate in the context of GRanges.   Leonardo Collado Torres
• [Bioc-devel] Zenodo DOIs for packages released (every 6 months, tied to the Bioc release)   Leonardo Collado Torres
• [Bioc-devel] Zenodo DOIs for packages released (every 6 months, tied to the Bioc release)   Leonardo Collado Torres
• [Bioc-devel] Custom build of packages   Leonardo Collado Torres
• [Bioc-devel] package submission - problem with vignette   Lara Urban
• [Bioc-devel] package submission - problem with vignette   Lara Urban
• [Bioc-devel] prebs failing in devel   Karolis Uziela
• [Bioc-devel] Build error on Moscato2   Samuel Wieczorek
• [Bioc-devel] Vignettes and package size   Samuel Wieczorek
• [Bioc-devel] updated BridgeDbR package   Egon Willighagen
• [Bioc-devel] updated BridgeDbR package   Egon Willighagen
• [Bioc-devel] question about transfering maintenance role   Lijing Yao
• [Bioc-devel] namespace question   Zhu, Lihua (Julie)
• [Bioc-devel] import except on Window Machine   Zhu, Lihua (Julie)
• [Bioc-devel] import except on Window Machine   Zhu, Lihua (Julie)
• [Bioc-devel] import except on Window Machine   Zhu, Lihua (Julie)
• [Bioc-devel] import except on Window Machine   Zhu, Lihua (Julie)
• [Bioc-devel] import except on Window Machine   Zhu, Lihua (Julie)
• [Bioc-devel] Found more than one class "Annotated" in cache   davide risso
• [Bioc-devel] Found more than one class "Annotated" in cache   davide risso
• [Bioc-devel] Found more than one class "Annotated" in cache   davide risso
• [Bioc-devel] namespace question   luke-tierney at uiowa.edu

Last message date: Sat Apr 30 13:05:22 CEST 2016
Archived on: Sat Apr 30 13:05:31 CEST 2016

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