[Bioc-devel] ggbio error

Leonardo Collado Torres lcollado at jhu.edu
Sat Apr 2 12:59:47 CEST 2016


Hi,

ggbio's error also cause some of my packages to fail the latest build.
But I'm confident it'll get fixed before the release.

Best,
Leo

On Sat, Apr 2, 2016 at 4:48 AM, Ludwig Geistlinger
<Ludwig.Geistlinger at bio.ifi.lmu.de> wrote:
> Hi,
>
> I am wondering whether this is only something temporary, but given that
> the new Bioc release is upcoming and packages should pass R CMD
> build/check by now, I am reporting that a ggbio R CMD check error
>
> http://bioconductor.org/checkResults/devel/bioc-LATEST/ggbio/zin2-checksrc.html
>
> causes ReportingTools to fail:
>
>> ERROR: dependency 'ggbio' is not available for package 'ReportingTools'
>
> and, eventually, EnrichmentBrowser to fail:
>
>> ERROR: dependency 'ReportingTools' is not available for package
> 'EnrichmentBrowser'
>
> Which steps need to be undertaken here?
>
> Thx,
> Ludwig
>
>
> --
> Dipl.-Bioinf. Ludwig Geistlinger
>
> Lehr- und Forschungseinheit für Bioinformatik
> Institut für Informatik
> Ludwig-Maximilians-Universität München
> Amalienstrasse 17, 2. Stock, Büro A201
> 80333 München
>
> Tel.: 089-2180-4067
> eMail: Ludwig.Geistlinger at bio.ifi.lmu.de
>
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