[Bioc-devel] ggbio error

Michael Lawrence lawrence.michael at gene.com
Sat Apr 2 13:00:20 CEST 2016


I think I fixed those things since the build report was generated.

Michael

On Sat, Apr 2, 2016 at 1:48 AM, Ludwig Geistlinger
<Ludwig.Geistlinger at bio.ifi.lmu.de> wrote:
> Hi,
>
> I am wondering whether this is only something temporary, but given that
> the new Bioc release is upcoming and packages should pass R CMD
> build/check by now, I am reporting that a ggbio R CMD check error
>
> http://bioconductor.org/checkResults/devel/bioc-LATEST/ggbio/zin2-checksrc.html
>
> causes ReportingTools to fail:
>
>> ERROR: dependency ‘ggbio’ is not available for package ‘ReportingTools’
>
> and, eventually, EnrichmentBrowser to fail:
>
>> ERROR: dependency ‘ReportingTools’ is not available for package
> ‘EnrichmentBrowser’
>
> Which steps need to be undertaken here?
>
> Thx,
> Ludwig
>
>
> --
> Dipl.-Bioinf. Ludwig Geistlinger
>
> Lehr- und Forschungseinheit für Bioinformatik
> Institut für Informatik
> Ludwig-Maximilians-Universität München
> Amalienstrasse 17, 2. Stock, Büro A201
> 80333 München
>
> Tel.: 089-2180-4067
> eMail: Ludwig.Geistlinger at bio.ifi.lmu.de
>
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