[Bioc-devel] can't find an annotation package

Hervé Pagès hpages at fredhutch.org
Thu Apr 28 18:57:42 CEST 2016


Hi,

Just to clarify, annotation packages are not in an svn repo like
the software and data experiment packages. We drop the tarballs
we receive from contributors directly into the public package
repos.

H..

On 04/28/2016 08:08 AM, Dan Tenenbaum wrote:
> Annotation packages are not in a public repository.
>
> You can get the tarball from the package landing page. Here's the devel (soon to be release) version:
>
> https://www.bioconductor.org/packages/devel/data/annotation/html/LowMACAAnnotation.html
>
> Dan
>
>
> ----- Original Message -----
>> From: "Giorgio Melloni" <melloni.giorgio at gmail.com>
>> To: "bioc-devel" <bioc-devel at r-project.org>
>> Sent: Thursday, April 28, 2016 6:11:58 AM
>> Subject: [Bioc-devel] can't find an annotation package
>
>> Dear all,
>>
>> I was doing some debugging on a package submitted a year ago (LowMACA) that is
>> accompanied by an annotation package (LowMACAAnnotation). I am able to svn
>> checkout LowMACA here:
>> https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/LowMACA , but I
>> cannot find a way to checkout the annotation package
>> (https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/LowMACAAnnotation
>> doesn't exist). Are the data packages on a different folder or repository?
>>
>> thanks in advance,
>>
>> Giorgio
>> 	[[alternative HTML version deleted]]
>>
>> _______________________________________________
>> Bioc-devel at r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>
> _______________________________________________
> Bioc-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>

-- 
Hervé Pagès

Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
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