Fourth quarter 2012 Archives by thread
Starting: Mon Oct 1 00:47:02 CEST 2012
Ending: Mon Dec 31 22:09:13 CET 2012
Messages: 466
- [R-sig-ME] Subject-wise log-likelihood gradient and hessian
Ben Bolker
- [R-sig-ME] nlme vs nlmer
Ben Bolker
- [R-sig-ME] nlme-function: Step halving factor reduced below minimum in PNLS step
Ben Bolker
- [R-sig-ME] user-defined covariance matrix for linear mixed models
philippe fullsack
- [R-sig-ME] Two Questions re: Piecewise mixed effects models
Joshua Wiley
- [R-sig-ME] fixed or random effects?
joana martelo
- [R-sig-ME] nlme: spatial autocorrelation on a sphere
Dan Bebber
- [R-sig-ME] Combining MCMCglmm estimates
Davina Hill
- [R-sig-ME] examples of combining chains from MCMCglmm
Jarrod Hadfield
- [R-sig-ME] Multivariate mixed models
Jarrod Hadfield
- [R-sig-ME] MCMCglmm: correctly estimating phylogenetic heritability
Jarrod Hadfield
- [R-sig-ME] Sampling methods for MCMCglmm using cengaussian family
Jarrod Hadfield
- [R-sig-ME] lmer multivariate longitudinal model
basile pinsard
- [R-sig-ME] Mixed model and negative binomial distribution
Seth W. Bigelow
- [R-sig-ME] Difficulties in trying to do a mixed effects model using the lmer function
Riedel Judith
- [R-sig-ME] Cochran's Q and I-squared for random-effects meta-analysis of proportions with lmer
Elias, S.G.
- [R-sig-ME] Mixed Effects Model with ordered dependent variable and random slopes
Eiko Fried
- [R-sig-ME] ZIP MCMCglmm
Katrin Ronnenberg
- [R-sig-ME] Origins of difference in significance between lmer/pvals.fnc and aov?
S Ellison
- [R-sig-ME] all pair comparisons in proportion analysis
Atsuko Sato
- [R-sig-ME] Fwd: Re: Mixed model and negative binomial distribution
Highland Statistics Ltd
- [R-sig-ME] MCMCglmm Starting Value structure
Robin Jeffries
- [R-sig-ME] Random Effects on Linear Mixed Models
David Llanos
- [R-sig-ME] visualizing effects of fixed factors and partial/whole model statistics
Timothy Farkas
- [R-sig-ME] FW: random effect
joana martelo
- [R-sig-ME] Linear Mixed Effects vs. Repeated Measures
Cortin A. Zelaznog
- [R-sig-ME] robust linear mixed model
Ahmad Rabiee
- [R-sig-ME] Fwd: lme() and SAS proc mixed
Ben Bolker
- [R-sig-ME] ASReml - heritability errors
Szymek Drobniak
- [R-sig-ME] 'Missing' tests for lmer models
Luke Duncan
- [R-sig-ME] problem with a mixed linear model interpretation
servant mathieu
- [R-sig-ME] random as fixed effect
joana martelo
- [R-sig-ME] random effect
Joana Martelo
- [R-sig-ME] specification of conditional random effects in lme
albrechj at staff.uni-marburg.de
- [R-sig-ME] modeling with hierarchical data
Matthew Medeiros
- [R-sig-ME] R-sig-mixed-models Digest, Vol 70, Issue 19
Antoine Tremblay
- [R-sig-ME] Which residuals to use for GEEs?
Andrew Digby
- [R-sig-ME] [Fwd: Errors in lme]
"Gerhard Göldner"
- [R-sig-ME] lmer and truncated gaussian distributions
Dan McCloy
- [R-sig-ME] Question about truncated poisson vs. normal poisson "minus one" & Co. in winbugs or glmer
Koether, Ulf
- [R-sig-ME] help interpreting variance estimate in nlmer
robert denham
- [R-sig-ME] Fwd: Question about truncated poisson vs. normal poisson "minus one" & Co. in winbugs or glmer
Ulf Köther
- [R-sig-ME] Question about truncated poisson vs. normal poisson, "minus one" & Co. in winbugs or glmer
Highland Statistics Ltd
- [R-sig-ME] extracting fixed effect from lme4 objects (coefplot2 not available)
Hans Ekbrand
- [R-sig-ME] Independence of residuals in a computer-based experiment/simulation analysed using a LME?
Gavin Simpson
- [R-sig-ME] GLMM with mgcv::gam
Gavin Simpson
- [R-sig-ME] lmer convergence parameters
Boris Hejblum
- [R-sig-ME] error in lmer: length(f1) == length(f2) is not TRUE
joana martelo
- [R-sig-ME] degrees of freedom for a mixed effect model
Saang-Yoon Hyun
- [R-sig-ME] How to estimate assess significance of variance components
chantepie at mnhn.fr
- [R-sig-ME] How to assess significance of variance components (Please discard previous e mail... but read this one)
chantepie at mnhn.fr
- [R-sig-ME] model selection with ordered probit of three categories
Agus Camacho
- [R-sig-ME] nlme, biexponential PK model simulation
Afshartous, David
- [R-sig-ME] glmer with dissimilarity values
Douglas Bates
- [R-sig-ME] convergence in GLMM (lme4 package)
Martí Casals
- [R-sig-ME] Maximizer failed
Ammara Mahmood
- [R-sig-ME] Simulate samples from glmmPQL
Andrew Digby
- [R-sig-ME] R-sig-mixed-models Digest, Vol 70, Issue 33
Andrew Digby
- [R-sig-ME] model averaging
joana martelo
- [R-sig-ME] Plot lmer model with Effects package
Marte Lilleeng
- [R-sig-ME] weighting observations in a glmmadmb model?
Giancarlo Sadoti
- [R-sig-ME] error question
Alejandro Martínez Abraín
- [R-sig-ME] Heritability of ordinal data in MCMCglmm and estimating fixed effects
Samantha Patrick
- [R-sig-ME] help with lme
Sylvia Opriessnig
- [R-sig-ME] R-square in lme
Sylvia Opriessnig
- [R-sig-ME] weighting observations in a MCMCglmm model?
Malcolm Fairbrother
- [R-sig-ME] lmer: No significant coefficients, but significant improvement of model fit?
r-sig-mixed-models at gjyp.nl
- [R-sig-ME] problems in fitting GLMM Poisson with crossed random effects in both lme4 and glmmADMB
Pablo Inchausti
- [R-sig-ME] problems fitting GLMM poisson with cross random effects in lme4 and glmmADMB
Pablo Inchausti
- [R-sig-ME] lmer and log link
Hugh Sturrock
- [R-sig-ME] BUGS/JAGS: prior for a 2D random effect
Andrew Digby
- [R-sig-ME] Contrasts among estimates of fixed effects
Seth W. Bigelow
- [R-sig-ME] Specifying random effects structures (in mcgv::gamm)
Mark Payne
- [R-sig-ME] unsubscribe please
Julie Black
- [R-sig-ME] lmer formula specification
Gjalt-Jorn Peters
- [R-sig-ME] glmmADMB random interaction effects and likelihood estimates
Seth W. Bigelow
- [R-sig-ME] Mixed modelling course with R in Portugal
Highland Statistics Ltd
- [R-sig-ME] EMMEANS - Estimated Marginal Means
Steve Taylor
- [R-sig-ME] lmer: effects of forcing fixed intercepts and slopes
Gjalt-Jorn Peters
- [R-sig-ME] corARMA in lme
Arnaud Mosnier
- [R-sig-ME] corARMA in lme (Arnaud Mosnier)
Highland Statistics Ltd
- [R-sig-ME] R-sig-mixed-models Digest, Vol 71, Issue 11
Arnaud Mosnier
- [R-sig-ME] beta0 lmer (R-forge version)
Ulrich Halekoh
- [R-sig-ME] R-sig-mixed-models Digest, Vol 71, Issue 10
Arnaud Mosnier
- [R-sig-ME] discrete data model classification
Maciej Swat
- [R-sig-ME] Error in lme.lmList (package nlme)
Dan Bebber
- [R-sig-ME] Getting started with lme4
Asaf Weinstein
- [R-sig-ME] Fixed covariates in nlmer()
Marko Bachl
- [R-sig-ME] How do I check whether the assumptions of equal variances and normality are fulfilled for ezANOVA() ?
Marianne K.
- [R-sig-ME] Non-parametric 2x2 Mixed Factorial ANOVA in R?
Marianne K.
- [R-sig-ME] cross-level interactions and random effect structure
Matthew Medeiros
- [R-sig-ME] relative importance of independendent variables in lm and lme models
Ellen Pape
- [R-sig-ME] Relative importance of independent variables for lm and lme models
ellen pape
- [R-sig-ME] Random-effects model with known error variance
Asaf Weinstein
- [R-sig-ME] lme/lmer and random effects correlation parameters
Antoine PACCARD
- [R-sig-ME] Error in glmer fit
Kevin E. Thorpe
- [R-sig-ME] Extracting model matrices used by lmer
Asaf Weinstein
- [R-sig-ME] Estimation of variance component parameters under known error variance
Asaf Weinstein
- [R-sig-ME] Variances and standard errors of predicted values following lmer()
matthias.suter at art.admin.ch
- [R-sig-ME] Treatment:Block interactions in lme (Schabenberger & Pierce 2002)
Christoph Scherber
- [R-sig-ME] Estimated random correlations close to 0 or 1
matthias.suter at art.admin.ch
- [R-sig-ME] Discrepancy in residuals in equivalent glmer (lme4) and glmmadmb models
Adam Smith
- [R-sig-ME] fixed effects (co)variance matrix from MCMCglmm
Katie Colborn
- [R-sig-ME] mer-class in lme4 package
Cantieni Andrea PHZ Schwyz
- [R-sig-ME] False convergence lmer
Brickhill, Daisy
- [R-sig-ME] Interpretation and use of parameters in beta glmmadmb
Biuw, Martin
- [R-sig-ME] Interpretation and use of parameters from beta glmmadmb
Biuw, Martin
- [R-sig-ME] INterpretation and use of parameters from beta glmmadmb - apology
Biuw, Martin
- [R-sig-ME] help with a mixed effect
Douglas Bates
- [R-sig-ME] Multinomial mixed-effect model in nnet
Jeffrey Warren
- [R-sig-ME] Mixed models and learning curves
Giovanna Ottaviani
- [R-sig-ME] assumptions linear mixed models
ellen pape
- [R-sig-ME] Error in .local(object, n, verbose, ...) : Update not yet written
joana martelo
- [R-sig-ME] assumptions of linear mixed models
Ellen Pape
- [R-sig-ME] mixed effects models and multiple explanatory variables that are correlated
Laurence O'Dwyer
- [R-sig-ME] mixed effects models and multiple explanatory variables that, are correlated
Highland Statistics Ltd
- [R-sig-ME] Getting the predicted fitted mean values for fixed effects from an lmer model
Ishani Banerji
- [R-sig-ME] Problem fitting multiple smoothers with gamm
William Butler
- [R-sig-ME] Heteroscedastic variances of random error in lmer
Gabriela Czanner
- [R-sig-ME] R-sig-mixed-models Digest, Vol 71, Issue 34
Laurence O'Dwyer
- [R-sig-ME] Problem fitting multiple smoothers with gamm (William Butler)
Highland Statistics Ltd
- [R-sig-ME] error message
Lip Khoon Kho
- [R-sig-ME] Fwd: mixed effects models and multiple explanatory variables that are correlated
Laurence O'Dwyer
- [R-sig-ME] R-squared in mixed model using nlme package
Ho Ngoc Phuong
- [R-sig-ME] Zipoisson MCMCglmm for abundance data
Daniel Sol
- [R-sig-ME] Bivariate Poisson MCMCglmm
Katie Colborn
- [R-sig-ME] question about confidence intervals with glmmPQL
Sally A Roman
- [R-sig-ME] contrasts in lmer to test difference in growth models
Carl Lamote
- [R-sig-ME] Likelihood
Bonitta Gianluca
- [R-sig-ME] within-group averaging
Jarrod Hadfield
- [R-sig-ME] non nested random effects in nlme and lme4
Thijs vanden Bergh
- [R-sig-ME] False Convergence in Mixed Logit Model
Laura Suttle
- [R-sig-ME] installation problem with RcppEigen
Douglas Bates
- [R-sig-ME] mer_optimize
Ivar Herfindal
- [R-sig-ME] glmer, split-plot design simple question
chico3 at sapo.pt
- [R-sig-ME] R-sig-mixed-models Digest, Vol 72, Issue 1
chico3 at sapo.pt
- [R-sig-ME] Repeated-measures anova with a within-subject covariate (or varying slopes random-effects?)
Giuseppe Pagnoni
- [R-sig-ME] randomized block design glmer question
chico3 at sapo.pt
- [R-sig-ME] Linear mixed modeling following multiple imputation.
Matthew Boden
- [R-sig-ME] extracting qAIC or quasi-likelihood from glmmPQL
PAUL, Mathilde
- [R-sig-ME] Repeated-measures anova with a within-subject covariate (or varying-slopes mixed model?)
Giuseppe Pagnoni
- [R-sig-ME] number of random-effects levels
Andrea Cantieni
- [R-sig-ME] Wald's test
Ben Bolker
- [R-sig-ME] Are mixed models a cure for pseudoreplication?
Christoph Scherber
- [R-sig-ME] Suggestions on my analysis with longitudinal data?
sh. chunxuan
- [R-sig-ME] (no subject)
logodall
- [R-sig-ME] Binomial GLMM - Error (invalid class “mer” object)
Robert Schaeffer
- [R-sig-ME] Difference of lme4 between the CRAN version and the development version
Joehanes, Roby (NIH/NHLBI) [F]
- [R-sig-ME] lme4 glmer general help wanted - code included
Ben Gillespie
- [R-sig-ME] Excluding random intercepts?
Kirsty E. B. Gurney
- [R-sig-ME] How to compute heritabilities on binomial response variables...
Rudy Garel
- [R-sig-ME] HELP on fixed effect model building with nlmer or nlme
Lara Reichmann
- [R-sig-ME] Mixed model including spatially autocorrelated response
Matlack, Glenn
- [R-sig-ME] split plot design glmer
chico3 at sapo.pt
- [R-sig-ME] random effect with only one level
laurent stephane
- [R-sig-ME] How to get dispersion parameter from a binomial mixed model?
v_coudrain at voila.fr
- [R-sig-ME] Mixed-Effects Models with Group or Covariate-Dependent Autocorrelation
Viechtbauer Wolfgang (STAT)
- [R-sig-ME] matrix not positive definite with lmer()
laurent stephane
- [R-sig-ME] are warnings not stored in the lmer() output ?
laurent stephane
- [R-sig-ME] empirical standard errors for glmer in lme4?
john benson
- [R-sig-ME] restart with estimates as starting values
laurent stephane
- [R-sig-ME] Interpretation of numIter 0 in glsObject
Lars Dalby
- [R-sig-ME] How to get dispersion parameter from a binomial mixed, model? (Ben Bolker)
Highland Statistics Ltd
- [R-sig-ME] How to get dispersion parameter from a binomial mixed, model?
v_coudrain at voila.fr
- [R-sig-ME] Are there sampling methods for glmer objects?
Joshua Wiley
- [R-sig-ME] AIC model selection problem
Diego Pujoni
- [R-sig-ME] glmm with correlated residuals
Emilio A. Laca
- [R-sig-ME] number of cases required to satisfy the assumptions of mixed models
Martí Casals
- [R-sig-ME] linear mixed model with non-monotonic longitudinal data
Brad Buran
- [R-sig-ME] what about "zero-inflated" predictors
Edwin Lebrija Trejos
- [R-sig-ME] call for lme4 with given Z?
Ryan King
- [R-sig-ME] algal nonlinear mixed effects problem
Ben Bolker
- [R-sig-ME] Solution to missing ID??
Luciano La Sala
Last message date:
Mon Dec 31 22:09:13 CET 2012
Archived on: Mon Dec 31 22:09:33 CET 2012
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