[R-sig-ME] Likelihood
Bonitta Gianluca
bbonit at tin.it
Thu Nov 29 13:19:31 CET 2012
Thank professor Ben. I think that i had used a wrong version..
ok all work...in right mode.
Is it possible to see this function in analytical form (oh yes his
implementation )? Because i can see that devFunOnly=TRUE will use a .Call.
the deviance is negative twice the log-likelihood but when i use this function
For to have likelihook function
(oh yes inverse function of dev,
but maby for metropolis ratio ( difference in case of log transformation) i
can use also deviance because i'm appling on the top and on the bottom of
ratio (difference) the same (biunivocal)transformation for likelihood
function that is dev)
i must set REML=F in
fm1 <- lmer(Reaction ~ Days + (Days|Subject), sleepstudy,
devFunOnly=TRUE,REML=T)
My problem is that the fm1 model (or better his likelihood) have more than
3 params ( vector theta labelled from lmer) only the random intercept params
are 18 if i dont wrong.. could be this function return the profile deviance..
sorry if i wrong the lme4 code is not "a walking" for me that i have just
start to approach into this marvellous word .. dont schold me, i know that for
you Ben and other developer into this list my request is silly
Sorry again for all noise
thank list
Best Bonitta
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