Third quarter 2012 Archives by thread

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Starting: Sun Jul 1 02:31:22 CEST 2012
Ending: Sun Sep 30 21:42:13 CEST 2012
Messages: 427

• [R-sig-ME] Using glmer in R   Muhammad Mullah
  • [R-sig-ME] Using glmer in R   David Duffy
    • [R-sig-ME] Using glmer in R   Muhammad Mullah
• [R-sig-ME] "mixed" MANOVAs   peter dalgaard
  • [R-sig-ME] "mixed" MANOVAs   Ben Bolker
    • [R-sig-ME] "mixed" MANOVAs   peter dalgaard
• [R-sig-ME] lmer() syntax and model specification   W Duncan Wadsworth
  • [R-sig-ME] lmer() syntax and model specification   W Duncan Wadsworth
• [R-sig-ME] edit: lmer() syntax and model specification   W Duncan Wadsworth
• [R-sig-ME] On deriving lmer formula   Camila Mendes
• [R-sig-ME] Fitting multilevel model to a recipe and simulating the model.   Paul Johnson
• [R-sig-ME] Mixed model correlation structure for unbalanced longitudinal data   Andy Flies
• [R-sig-ME] Mixed model correlation structure for unbalanced, longitudinal data   Highland Statistics Ltd
  • [R-sig-ME] Mixed model correlation structure for unbalanced, longitudinal data   Andy Flies
• [R-sig-ME] MCMCglmm: priors for ordinal regression   m.fenati at libero.it
  • [R-sig-ME] MCMCglmm: priors for ordinal regression   Jarrod Hadfield
  • [R-sig-ME] MCMCglmm: priors for ordinal regression   m.fenati at libero.it
    • [R-sig-ME] MCMCglmm: priors for ordinal regression   Jarrod Hadfield
  • [R-sig-ME] MCMCglmm: priors for ordinal regression   m.fenati at libero.it
    • [R-sig-ME] MCMCglmm: priors for ordinal regression   Jarrod Hadfield
  • [R-sig-ME] MCMCglmm: priors for ordinal regression   m.fenati at libero.it
• [R-sig-ME] A zero inflated Poisson model in MCMCglmm   Helen Ward
  • [R-sig-ME] A zero inflated Poisson model in MCMCglmm   David Duffy
  • [R-sig-ME] A zero inflated Poisson model in MCMCglmm   Jarrod Hadfield
    • [R-sig-ME] A zero inflated Poisson model in MCMCglmm   Helen Ward
      • [R-sig-ME] A zero inflated Poisson model in MCMCglmm   Jarrod Hadfield
      • [R-sig-ME] A zero inflated Poisson model in MCMCglmm   Helen Ward
      • [R-sig-ME] A zero inflated Poisson model in MCMCglmm   Jarrod Hadfield
• [R-sig-ME] Adjusting for random recording intervals in glmer/poisson   Dieter Menne
  • [R-sig-ME] Adjusting for random recording intervals in glmer/poisson   Joshua Wiley
    • [R-sig-ME] Adjusting for random recording intervals in glmer/poisson   Dieter Menne
    • [R-sig-ME] Adjusting for random recording intervals in glmer/poisson   Joshua Wiley
      • [R-sig-ME] Adjusting for random recording intervals in glmer/poisson   Dieter Menne
• [R-sig-ME] singular convergence with lmer()   laurent stephane
  • [R-sig-ME] singular convergence with lmer()   Ben Bolker
    • [R-sig-ME] singular convergence with lmer()   Reinhold Kliegl
      • [R-sig-ME] singular convergence with lmer()   David Duffy
      • [R-sig-ME] singular convergence with lmer()   laurent stephane
  • [R-sig-ME] singular convergence with lmer()   Joshua Wiley
    • [R-sig-ME] singular convergence with lmer()   Baldwin, Jim -FS
      • [R-sig-ME] singular convergence with lmer()   Dennis Murphy
  • [R-sig-ME] singular convergence with lmer()   laurent stephane
• [R-sig-ME] Is there an option to not include the correlation matrix in output of the glmmadmb function?   Mueller,John Martin
  • [R-sig-ME] Is there an option to not include the correlation matrix in output of the glmmadmb function?   Ben Bolker
• [R-sig-ME] Zero-inflated mixed effects model - clarification of zeros modeled and R package questions   Jennifer Barrett
  • [R-sig-ME] Zero-inflated mixed effects model - clarification of zeros modeled and R package questions   Ben Bolker
    • [R-sig-ME] Zero-inflated mixed effects model - clarification of zeros modeled and R package questions   Jennifer Barrett
• [R-sig-ME] Calculating CI's for multiple fixed effects   Gus Jespersen
  • [R-sig-ME] Calculating CI's for multiple fixed effects   Ben Bolker
• [R-sig-ME] Problem resolved   Justice Moses K. Aheto
• [R-sig-ME] Dealing with overdispersion with glmmadmb beta distribution   Heather Kharouba
  • [R-sig-ME] Dealing with overdispersion with glmmadmb beta distribution   Ben Bolker
• [R-sig-ME] zero inflated and repeat cells   Stephanie L. Simek
  • [R-sig-ME] zero inflated and repeat cells   Highland Statistics Ltd
• [R-sig-ME] Post-test on MCMCglmm posteriors distribution   Stephane Chantepie
  • [R-sig-ME] Post-test on MCMCglmm posteriors distribution   Jarrod Hadfield
• [R-sig-ME] coding a simple multiple membership model   amit gal
  • [R-sig-ME] coding a simple multiple membership model   amit gal
• [R-sig-ME] Connectedness of rows/columns of a matrix   Kevin Wright
  • [R-sig-ME] Connectedness of rows/columns of a matrix   David Duffy
• [R-sig-ME] P values in summary tables from lmer objects   Christoph Scherber
  • [R-sig-ME] P values in summary tables from lmer objects   lborger
    • [R-sig-ME] P values in summary tables from lmer objects   Ben Bolker
• [R-sig-ME] why is there no the REML option for lme4::glmer   Stolen, D Eric (KSC-IHA-4400)[Innovative Health Applications LLC]
  • [R-sig-ME] why is there no the REML option for lme4::glmer   peter dalgaard
• [R-sig-ME] Help needed in simulating fitted multilevel model in R.   Justice Moses K. Aheto
• [R-sig-ME] MCMCglmm R-Variable importance   Navinder Singh
• [R-sig-ME] Calculating fixed effect contrasts with log-transformed data   Gus Jespersen
  • [R-sig-ME] Calculating fixed effect contrasts with log-transformed data   Highland Statistics Ltd
  • [R-sig-ME] Calculating fixed effect contrasts with log-transformed data   ONKELINX, Thierry
    • [R-sig-ME] Calculating fixed effect contrasts with log-transformed data   Gus Jespersen
      • [R-sig-ME] Calculating fixed effect contrasts with log-transformed data   Ben Bolker
• [R-sig-ME] Question: incorporating paired data into mixed models   Julie Kern
  • [R-sig-ME] Question: incorporating paired data into mixed models   Ben Bolker
• [R-sig-ME] In simple terms, how is the estimated variance of higher-level effects calculated?   Jeremy Koster
  • [R-sig-ME] In simple terms, how is the estimated variance of higher-level effects calculated?   David Duffy
    • [R-sig-ME] In simple terms, how is the estimated variance of higher-level effects calculated?   Jeremy Koster
      • [R-sig-ME] In simple terms, how is the estimated variance of higher-level effects calculated?   Douglas Bates
      • [R-sig-ME] In simple terms, how is the estimated variance of higher-level effects calculated?   Joshua Wiley
• [R-sig-ME] MCMCglmm question   Jackson King
  • [R-sig-ME] MCMCglmm question   David Duffy
  • [R-sig-ME] MCMCglmm question   Jarrod Hadfield
• [R-sig-ME] glsControl(optimMethod = "L-BFGS-B"), : false convergence (8) ERROR   Beatriz De Francisco
• [R-sig-ME] patch for pedigremm   Joehanes, Roby (NIH/NHLBI) [F]
  • [R-sig-ME] patch for pedigremm   Joehanes, Roby (NIH/NHLBI) [F]
• [R-sig-ME] predicted mean from GLMM lower than mean from GAM   benton
  • [R-sig-ME] predicted mean from GLMM lower than mean from GAM   Ben Bolker
    • [R-sig-ME] predicted mean from GLMM lower than mean from GAM   Jarrod Hadfield
  • [R-sig-ME] predicted mean from GLMM lower than mean from GAM   benton
• [R-sig-ME] (no subject)   Alejandro Martínez Abraín
• [R-sig-ME] overdispersion in GLMMs   Alejandro Martínez Abraín
  • [R-sig-ME] overdispersion in GLMMs   Luca Borger
• [R-sig-ME] fixed effects/log transformations question   Gus Jespersen
  • [R-sig-ME] fixed effects/log transformations question   Ben Bolker
• [R-sig-ME] Zero-inflated mixed effects model - clarification of, zeros modeled and R package questions   Highland Statistics Ltd
• [R-sig-ME] Covariance Matrix of fixed effects in lmer()   Matthias Suter
  • [R-sig-ME] Covariance Matrix of fixed effects in lmer()   Ben Bolker
  • [R-sig-ME] covariance matrix of fixed effects in lmer()   matthias.suter at art.admin.ch
    • [R-sig-ME] covariance matrix of fixed effects in lmer()   ONKELINX, Thierry
• [R-sig-ME] MCMCglmm : Difference in additive genetic variance estimated in univariate vs bivariate models   Stephane Chantepie
  • [R-sig-ME] MCMCglmm : Difference in additive genetic variance estimated in univariate vs bivariate models   Jarrod Hadfield
    • [R-sig-ME] MCMCglmm : Difference in additive genetic variance estimated in univariate vs bivariate models   Stephane Chantepie
      • [R-sig-ME] MCMCglmm : Difference in additive genetic variance estimated in univariate vs bivariate models   Jarrod Hadfield
• [R-sig-ME] expert opinion on using lmer   Yolande Tra
  • [R-sig-ME] expert opinion on using lmer   Federico Calboli
    • [R-sig-ME] expert opinion on using lmer   Yolande Tra
• [R-sig-ME] overdispersion in GLMMs (Alejandro Mart?nez Abra?n)   Elizabeth Crone
  • [R-sig-ME] overdispersion in GLMMs (Alejandro Mart?nez Abra?n)   David Atkins
• [R-sig-ME] lmer, no residual in the output - want REML not laplace   Yolande Tra
  • [R-sig-ME] lmer, no residual in the output - want REML not laplace   Ben Bolker
• [R-sig-ME] MCMCglmm: anova table   Javier Perez-Barberia
• [R-sig-ME] nlmer "Error: object of type 'symbol' is not subsettable"   Amanda Henry
  • [R-sig-ME] nlmer "Error: object of type 'symbol' is not subsettable"   Ben Bolker
• [R-sig-ME] lmer output shows laplace approximation not reml   Douglas Bates
  • [R-sig-ME] lmer output shows laplace approximation not reml   Yolande Tra
    • [R-sig-ME] lmer output shows laplace approximation not reml   Joshua Wiley
      • [R-sig-ME] lmer output shows laplace approximation not reml   Ben Bolker
      • [R-sig-ME] lmer output shows laplace approximation not reml   Yolande Tra
      • [R-sig-ME] MCMCglmm prior choice for random intercept model   Joe King
• [R-sig-ME] GLMM Q: Categorical fixed effects with more than 2 levels   Julie Kern
  • [R-sig-ME] GLMM Q: Categorical fixed effects with more than 2 levels   Paul Johnson
    • [R-sig-ME] GLMM Q: Categorical fixed effects with more than 2 levels   Henric (Nilsson) Winell
• [R-sig-ME] zero inflated poisson output   Brickhill, Daisy
  • [R-sig-ME] zero inflated poisson output   Ben Bolker
• [R-sig-ME] mean and variance of random effects in glmer   Ken Kelley
  • [R-sig-ME] mean and variance of random effects in glmer   ONKELINX, Thierry
    • [R-sig-ME] mean and variance of random effects in glmer   Ken Kelley
      • [R-sig-ME] mean and variance of random effects in glmer   ONKELINX, Thierry
      • [R-sig-ME] mean and variance of random effects in glmer   Jake Westfall
• [R-sig-ME] predict in mixed models   Alejandro Martínez Abraín
  • [R-sig-ME] predict in mixed models   ONKELINX, Thierry
  • [R-sig-ME] predict in mixed models   Alistair Stewart
• [R-sig-ME] Large data set with several nesting levels and autocorrelated errors   lorenz.gygax at art.admin.ch
  • [R-sig-ME] Large data set with several nesting levels and autocorrelated errors   ONKELINX, Thierry
  • [R-sig-ME] Large data set with several nesting levels and autocorrelated errors   lorenz.gygax at art.admin.ch
• [R-sig-ME] Extracting means and SE from lme & lmer with random terms   Julie Kern
  • [R-sig-ME] Extracting means and SE from lme & lmer with random terms   Ben Bolker
• [R-sig-ME] Specifying 'correct' degrees of freedom for within-subject factor in *nlme/lme* repeated measures ANOVA?   Stephanie Avery-Gomm
  • [R-sig-ME] Specifying 'correct' degrees of freedom for within-subject factor in *nlme/lme* repeated measures ANOVA?   Ben Bolker
    • [R-sig-ME] Specifying 'correct' degrees of freedom for within-subject factor in *nlme/lme* repeated measures ANOVA?   peter dalgaard
    • [R-sig-ME] Specifying 'correct' degrees of freedom for within-subject factor in *nlme/lme* repeated measures ANOVA?   John Maindonald
  • [R-sig-ME] Specifying 'correct' degrees of freedom for within-subject factor in *nlme/lme* repeated measures ANOVA?   John Maindonald
• [R-sig-ME] lme4 t value for 3 levels of fixed factor   Obermeier Andrew
• [R-sig-ME] comparing 3 levels of fixed factor in lme4   Obermeier Andrew
  • [R-sig-ME] comparing 3 levels of fixed factor in lme4   peter dalgaard
    • [R-sig-ME] comparing 3 levels of fixed factor in lme4   John Maindonald
      • [R-sig-ME] comparing 3 levels of fixed factor in lme4   Obermeier Andrew
      • [R-sig-ME] comparing 3 levels of fixed factor in lme4   John Maindonald
    • [R-sig-ME] comparing 3 levels of fixed factor in lme4   Obermeier Andrew
      • [R-sig-ME] comparing 3 levels of fixed factor in lme4   Luca Borger
      • [R-sig-ME] comparing 3 levels of fixed factor in lme4   Thomas Petzoldt
      • [R-sig-ME] comparing 3 levels of fixed factor in lme4   Obermeier Andrew
      • [R-sig-ME] comparing 3 levels of fixed factor in lme4   peter dalgaard
      • [R-sig-ME] comparing 3 levels of fixed factor in lme4   Obermeier Andrew
• [R-sig-ME] measure of fit with GLMM   David Douterlungne
  • [R-sig-ME] measure of fit with GLMM   Ben Bolker
• [R-sig-ME] mcmcglmm and parallel chains   Joshua Wiley
• [R-sig-ME] Error using glmmADMB   Belén Fresnillo
  • [R-sig-ME] Error using glmmADMB   Ben Bolker
• [R-sig-ME] MCMCglmm zero-altered   Brickhill, Daisy
  • [R-sig-ME] MCMCglmm zero-altered   Jarrod Hadfield
    • [R-sig-ME] MCMCglmm zero-altered   Brickhill, Daisy
    • [R-sig-ME] MCMCglmm zero-altered   Jarrod Hadfield
• [R-sig-ME] question about In mer_finalize(ans) : iteration limit reached without convergence (9)   Christopher Kurby
• [R-sig-ME] lme4 - GLMM dispersion parameter?   Liam Crowther (BIO)
  • [R-sig-ME] lme4 - GLMM dispersion parameter?   Ben Bolker
    • [R-sig-ME] lme4 - GLMM dispersion parameter?   John Maindonald
      • [R-sig-ME] MCMCglmm non-informative prior   W Robert Long
• [R-sig-ME] basic question   Rachel Cohen
  • [R-sig-ME] basic question   Ben Bolker
    • [R-sig-ME] basic question   Ben Bolker
      • [R-sig-ME] basic question   Baldwin, Jim -FS
      • [R-sig-ME] basic question   Rachel Cohen
      • [R-sig-ME] basic question   Ben Bolker
• [R-sig-ME] Question on statistical methods in manuscript   Saunders, Michael R
• [R-sig-ME] two questions about clmm   Malcolm Fairbrother
  • [R-sig-ME] two questions about clmm   Rune Haubo
• [R-sig-ME] reaped measures with unequal intervals   Tom_Philippi at nps.gov
• [R-sig-ME] confusing error message   Victoria Buller
  • [R-sig-ME] confusing error message   Ben Bolker
  • [R-sig-ME] confusing error message   Victoria Buller
    • [R-sig-ME] confusing error message   Ben Bolker
• [R-sig-ME] same within group std. error   Jesus
  • [R-sig-ME] same within group std. error   peter dalgaard
• [R-sig-ME] Extracting the posterior distribution for a random effect in MCMCglmm   Robert Long
  • [R-sig-ME] Extracting the posterior distribution for a random effect in MCMCglmm   Jarrod Hadfield
    • [R-sig-ME] Extracting the posterior distribution for a random effect in MCMCglmm   Robert Long
      • [R-sig-ME] Extracting the posterior distribution for a random effect in MCMCglmm   Jarrod Hadfield
  • [R-sig-ME] Extracting the posterior distribution for a random effect in MCMCglmm   ONKELINX, Thierry
• [R-sig-ME] Extracting the posterior distribution for a random, effect in MCMCglmm   Ned Dochtermann
  • [R-sig-ME] Extracting the posterior distribution for a random, effect in MCMCglmm   W Robert Long
• [R-sig-ME] convergence slot in glmer?   Alexandre Martin
  • [R-sig-ME] convergence slot in glmer?   Emmanuel Curis
• [R-sig-ME] code for multiple membership models?   George Leckie
  • [R-sig-ME] code for multiple membership models?   Jarrod Hadfield
• [R-sig-ME] Model for irregular design   paul
• [R-sig-ME] pvals.fnc + lmer, discrepancy between pvalues   Nadine Klauke
• [R-sig-ME] Is there an R function for GLMM with binary response, nested random factors, and temporal correlation?   Andrew Digby
  • [R-sig-ME] Is there an R function for GLMM with binary response, nested random factors, and temporal correlation?   Douglas Bates
    • [R-sig-ME] Is there an R function for GLMM with binary response, nested random factors, and temporal correlation?   Andrew Digby
    • [R-sig-ME] Is there an R function for GLMM with binary response, nested random factors, and temporal correlation?   Douglas Bates
      • [R-sig-ME] Is there an R function for GLMM with binary response, nested random factors, and temporal correlation?   Andrew Digby
• [R-sig-ME] How to handle measurement uncertainities with lmer   Frömmel, Ulrike
• [R-sig-ME] multiple comparisons with MCMCglmm?   mikhail matz
  • [R-sig-ME] multiple comparisons with MCMCglmm?   John Maindonald
• [R-sig-ME] Is there an R function for GLMM with binary   Eduardo Martins
  • [R-sig-ME] Is there an R function for GLMM with binary   Highland Statistics Ltd
  • [R-sig-ME] Is there an R function for GLMM with binary   Highland Statistics Ltd
• [R-sig-ME] Response variable with zero variance   Tonya Haff
  • [R-sig-ME] Response variable with zero variance   ONKELINX, Thierry
    • [R-sig-ME] Response variable with zero variance   Tonya Haff
      • [R-sig-ME] Response variable with zero variance   Ben Bolker
      • [R-sig-ME] Response variable with zero variance   Joshua Wiley
• [R-sig-ME] Testing for significant intercept-slope correlation in nlme   Kevin Hallgren
  • [R-sig-ME] Testing for significant intercept-slope correlation in nlme   David Atkins
  • [R-sig-ME] Testing for significant intercept-slope correlation in nlme   Kevin Hallgren
• [R-sig-ME] announcing package afex: obtain p-values for all fixed effects in a lmer() model via KRmodcomp   Henrik Singmann
• [R-sig-ME] correlations between fixed effects: groups or individuals for mixed models?   john benson
  • [R-sig-ME] correlations between fixed effects: groups or individuals for mixed models?   David Duffy
    • [R-sig-ME] correlations between fixed effects: groups or individuals for mixed models?   john benson
      • [R-sig-ME] lmer logistic nested random effects   Ben Pelzer
      • [R-sig-ME] lmer logistic nested random effects   Joshua Wiley
• [R-sig-ME] Controlling for non-independence in across population analyasis   Frazer Sinclair
• [R-sig-ME] error applying user-defined link function to lmer   Kathleen Vancleef
• [R-sig-ME] Including an offset in a binomial GLM/GLMM   Leila Brook
  • [R-sig-ME] Including an offset in a binomial GLM/GLMM   Baldwin, Jim -FS
    • [R-sig-ME] Including an offset in a binomial GLM/GLMM   Leila Brook
      • [R-sig-ME] Including an offset in a binomial GLM/GLMM   Baldwin, Jim -FS
• [R-sig-ME] Split plot design and repeated measures   Tara Zamin
• [R-sig-ME] unused argument(s) HELP   Karina Villegas
  • [R-sig-ME] unused argument(s) HELP   Douglas Bates
    • [R-sig-ME] unused argument(s) HELP   Karina Villegas
      • [R-sig-ME] unused argument(s) HELP   Douglas Bates
• [R-sig-ME] Setting up interaction contrasts in lme4 generalized linear mixed model   Esther Schott
• [R-sig-ME] lmer bug   Joehanes, Roby (NIH/NHLBI) [F]
  • [R-sig-ME] lmer bug   Joehanes, Roby (NIH/NHLBI) [F]
  • [R-sig-ME] lmer bug   Douglas Bates
• [R-sig-ME] Question on Mixed Models Uisng R   li li
  • [R-sig-ME] Question on Mixed Models Uisng R   Alan Haynes
• [R-sig-ME] random effect nested in the fixed effect   li li
  • [R-sig-ME] random effect nested in the fixed effect   Hans Ekbrand
  • [R-sig-ME] random effect nested in the fixed effect   Hans Ekbrand
• [R-sig-ME] Dear sir,   MASAAKI
• [R-sig-ME] mixed effects nested repeated measures MANOVA   Kevin Parsons
• [R-sig-ME] Another MCMCglmm question - fixing correlations   Malcolm Fairbrother
  • [R-sig-ME] Another MCMCglmm question - fixing correlations   Jarrod Hadfield
• [R-sig-ME] Retrieve autocorrelation-corrected errors from gls (nlme) or gamm (mgcv)   Daniel Malter
• [R-sig-ME] Retrieve autocorrelation-corrected errors from gls (nlme) or, gamm (mgcv) (Daniel Malter)   Highland Statistics Ltd
• [R-sig-ME] [R] Question concerning anova()   Rainer M Krug
  • [R-sig-ME] [R] Question concerning anova()   Bert Gunter
  • [R-sig-ME] [R] Question concerning anova()   Rainer M Krug
  • [R-sig-ME] Question concerning anova()   Rainer M Krug
    • [R-sig-ME] Question concerning anova()   Rainer M Krug
• [R-sig-ME] use lme4 if given effects' design matrix   Jie
• [R-sig-ME] How to obtain Type 2 like p-values for effects?   Henrik Singmann
  • [R-sig-ME] How to obtain Type 2 like p-values for effects?   John Fox
    • [R-sig-ME] How to obtain Type 2 like p-values for effects?   Henrik Singmann
• [R-sig-ME] Will lmer/lme work for a model such as this?   Paul Schmitt
• [R-sig-ME] Dealing with heteroscedasticity in a GLM/M   Leila Brook
  • [R-sig-ME] Dealing with heteroscedasticity in a GLM/M   Alan Haynes
  • [R-sig-ME] Dealing with heteroscedasticity in a GLM/M   Markus Jäntti
  • [R-sig-ME] Dealing with heteroscedasticity in a GLM/M   Highland Statistics Ltd
  • [R-sig-ME] Dealing with heteroscedasticity in a GLM/M   Highland Statistics Ltd
  • [R-sig-ME] Dealing with heteroscedasticity in a GLM/M   Paul Johnson
• [R-sig-ME] Questions about MCMCglmm and marker data   Marie Denis
  • [R-sig-ME] Questions about MCMCglmm and marker data   Emmanuel Curis
    • [R-sig-ME] Questions about MCMCglmm and marker data   Jarrod Hadfield
• [R-sig-ME] working around glm.fit: "fitted probabilities numerically 0 or 1 occurred"   Jack Tanner
  • [R-sig-ME] working around glm.fit: "fitted probabilities numerically 0 or 1 occurred"   Chris Howden
  • [R-sig-ME] working around glm.fit: "fitted probabilities numerically 0 or 1 occurred"   S Ellison
    • [R-sig-ME] working around glm.fit: "fitted probabilities numerically 0 or 1 occurred"   Jack Tanner
• [R-sig-ME] Pseudo R squared   Gary Dong
• [R-sig-ME] who shot the predict method (and did you shoot the deputy as well?)   Paul Johnson
  • [R-sig-ME] who shot the predict method (and did you shoot the deputy as well?)   Ben Bolker
• [R-sig-ME] MCMCglmm multinomial logit   Jackson King
  • [R-sig-ME] MCMCglmm multinomial logit   Jarrod Hadfield
  • [R-sig-ME] MCMCglmm multinomial logit   Jackson King
• [R-sig-ME] bayes factors for MCMCglmm   Mikhail Matz
  • [R-sig-ME] bayes factors for MCMCglmm   Ben Bolker
    • [R-sig-ME] bayes factors for MCMCglmm   Jarrod Hadfield
      • [R-sig-ME] bayes factors for MCMCglmm   Matt Pennell
• [R-sig-ME] GLMM with mgcv::gam   Andreas Böck
  • [R-sig-ME] GLMM with mgcv::gam   Andreas Böck
• [R-sig-ME] Linear Mixed Model with Twin Data; Heteroscedasticity?‏   Frank Savage
  • [R-sig-ME] Linear Mixed Model with Twin Data; Heteroscedasticity?‏   Frank Savage
• [R-sig-ME] lme4 book pdf   Jack Tanner
  • [R-sig-ME] lme4 book pdf   Jack Tanner
    • [R-sig-ME] lme4 book pdf   Rainer M Krug
      • [R-sig-ME] lme4 book pdf   Jack Tanner
      • [R-sig-ME] lme4 book pdf   Steve Taylor
      • [R-sig-ME] lme4 book pdf   Douglas Bates
• [R-sig-ME] Dealing with heteroscedasticity in a GLM/M (Paul Johnson)   Kumiko Fukumura
• [R-sig-ME] quick question regarding your "residual" command for your lmer command - please help me   Douglas Bates
  • [R-sig-ME] quick question regarding your "residual" command for your lmer command - please help me   Douglas Bates
    • [R-sig-ME] quick question regarding your "residual" command for your lmer command - please help me   David Atkins
• [R-sig-ME] MCMCglmm poisson / not poisson   Mikhail Matz
  • [R-sig-ME] MCMCglmm poisson / not poisson   Jarrod Hadfield
    • [R-sig-ME] MCMCglmm poisson / not poisson   Mikhail Matz
  • [R-sig-ME] MCMCglmm poisson / not poisson   Jarrod Hadfield
  • [R-sig-ME] MCMCglmm poisson / not poisson   Mikhail Matz
    • [R-sig-ME] Fwd: MCMCglmm poisson / not poisson   Mikhail Matz
• [R-sig-ME] Is there an R function for GLMM with binary, response, nested random factors, and temporal correlation?   Highland Statistics Ltd
  • [R-sig-ME] Is there an R function for GLMM with binary, response, nested random factors, and temporal correlation?   Andrew Digby
• [R-sig-ME] Interpretation of effects   Eiko Fried
  • [R-sig-ME] Interpretation of effects   Ben Bolker
• [R-sig-ME] instrumenting for an Xj correlated with Uj   Malcolm Fairbrother
• [R-sig-ME] Phylogenetic Logistic Regression + MCMCglmm   Joanna L Baker
  • [R-sig-ME] Phylogenetic Logistic Regression + MCMCglmm   Jarrod Hadfield
    • [R-sig-ME] Phylogenetic Logistic Regression + MCMCglmm   Joanna L Baker
      • [R-sig-ME] Phylogenetic Logistic Regression + MCMCglmm   Jarrod Hadfield
• [R-sig-ME] lme4 with Poisson   Douglas Bates
  • [R-sig-ME] lme4 with Poisson   Mitchell Maltenfort
  • [R-sig-ME] lme4 with Poisson   Maciej Swat
  • [R-sig-ME] lme4 with Poisson   Ben Bolker
  • [R-sig-ME] lme4 with Poisson   Highland Statistics Ltd
  • [R-sig-ME] lme4 with Poisson   John Maindonald
• [R-sig-ME] ordinal multilevel model   Hester Lingsma
  • [R-sig-ME] ordinal multilevel model   Stuart Luppescu
  • [R-sig-ME] ordinal multilevel model   Kari Ruohonen
• [R-sig-ME] Split plot design with repeated measures - model errors (nlme)   Anthony Rietl
  • [R-sig-ME] Split plot design with repeated measures - model errors (nlme)   Tom_Philippi at nps.gov
    • [R-sig-ME] Split plot design with repeated measures - model errors (nlme)   Anthony Rietl
      • [R-sig-ME] Split plot design with repeated measures - model errors (nlme)   Anthony Rietl
  • [R-sig-ME] Split plot design with repeated measures - model errors (nlme)   I.M.S.White
• [R-sig-ME] RStan: Fast, multilevel Bayesian modeling in R   Mike Lawrence
• [R-sig-ME] AUTO: New email address for Dave LeBlond: david.leblond at sbcglobal.net   David LeBlond
  • [R-sig-ME] AUTO: New email address for Dave LeBlond: david.leblond at sbcglobal.net   David LeBlond
    • [R-sig-ME] AUTO: New email address for Dave LeBlond: david.leblond at sbcglobal.net   Jake Westfall
• [R-sig-ME] Help   Julie Webbs
  • [R-sig-ME] Help   Federico Calboli
    • [R-sig-ME] Help   Douglas Bates
• [R-sig-ME] False convergence when running lmer with Zelig example for gamma.mixed   Martin Schmettow
• [R-sig-ME] Using weights properly in lmer   Joehanes, Roby (NIH/NHLBI) [F]
• [R-sig-ME] multi-environments trial : how to take into account different residual variances ?   DUYME Florent
• [R-sig-ME] help for HLM   Karina Villegas
  • [R-sig-ME] help for HLM   Douglas Bates
• [R-sig-ME] Heterogeneous (co)variances in a bivariate model with MCMCglmm?   Vincent Careau
  • [R-sig-ME] Heterogeneous (co)variances in a bivariate model with MCMCglmm?   David Atkins
    • [R-sig-ME] Heterogeneous (co)variances in a bivariate model with MCMCglmm?   Vincent Careau
      • [R-sig-ME] Heterogeneous (co)variances in a bivariate model with MCMCglmm?   David Atkins
      • [R-sig-ME] Heterogeneous (co)variances in a bivariate model with MCMCglmm?   Jarrod Hadfield
• [R-sig-ME] Characterizing correlation between binomial effects   Mike Lawrence
  • [R-sig-ME] Characterizing correlation between binomial effects   Mike Lawrence
    • [R-sig-ME] Characterizing correlation between binomial effects   Jake Westfall
      • [R-sig-ME] Characterizing correlation between binomial effects   Viechtbauer Wolfgang (STAT)
  • [R-sig-ME] Characterizing correlation between binomial effects   David Duffy
• [R-sig-ME] Priors for and estimating heritability from an ordinal and a Poisson animal model   Helen Ward
  • [R-sig-ME] Fwd: Priors for and estimating heritability from an ordinal and a Poisson animal model   Helen Ward
    • [R-sig-ME] Fwd: Priors for and estimating heritability from an ordinal and a Poisson animal model   David Duffy
  • [R-sig-ME] Priors for and estimating heritability from an ordinal and a Poisson animal model   Pierre B. de Villemereuil
• [R-sig-ME] mcmcsamp with Poisson distribution   Nate Fronk
  • [R-sig-ME] mcmcsamp with Poisson distribution   Ben Bolker
• [R-sig-ME] sparse Matrix from phylo object in MCMCglmm   Luis Verde
  • [R-sig-ME] sparse Matrix from phylo object in MCMCglmm   Jarrod Hadfield
    • [R-sig-ME] sparse Matrix from phylo object in MCMCglmm   Luis Verde
• [R-sig-ME] Pearson residuals in R2jags   Andrew Digby
• [R-sig-ME] MixMod lsmeans question   guillaume chaumet
  • [R-sig-ME] MixMod lsmeans question   Ben Bolker
  • [R-sig-ME] MixMod lsmeans question   Alexandra Kuznetsova
    • [R-sig-ME] MixMod lsmeans question   guillaume chaumet
      • [R-sig-ME] MixMod lsmeans question   Alexandra Kuznetsova
• [R-sig-ME] nlme model.matrix problem for prediction intervals   Andrew Close
  • [R-sig-ME] nlme model.matrix problem for prediction intervals   Ben Bolker
• [R-sig-ME] Question on significancy of terms   Leonel Lopez
  • [R-sig-ME] Question on significancy of terms   Emmanuel Curis
  • [R-sig-ME] Question on significancy of terms   Geoff Brookshire
• [R-sig-ME] model definition issues for repeat measures   Caroline
  • [R-sig-ME] model definition issues for repeat measures   Ben Bolker
• [R-sig-ME] Cumulative link mixed model appropriate in a 2x4 design?   Klemens Weigl
  • [R-sig-ME] Cumulative link mixed model appropriate in a 2x4 design?   Jarrod Hadfield
    • [R-sig-ME] Cumulative link mixed model appropriate in a 2x4 design?   Klemens Weigl
      • [R-sig-ME] Cumulative link mixed model appropriate in a 2x4 design?   Rune Haubo
• [R-sig-ME] 3-level fixed factor in lme4   Obermeier Andrew
  • [R-sig-ME] 3-level fixed factor in lme4   Alan Haynes
• [R-sig-ME] Split plot (with repeated measure?)   Mike Palmer
  • [R-sig-ME] Split plot (with repeated measure?)   Thompson,Paul
• [R-sig-ME] mixed models with two random variables?   barbara costa
  • [R-sig-ME] mixed models with two random variables?   Malcolm Fairbrother
    • [R-sig-ME] mixed models with two random variables?   barbara costa
      • [R-sig-ME] mixed models with two random variables?   Malcolm Fairbrother
      • [R-sig-ME] mixed models with two random variables?   barbara costa
• [R-sig-ME] examples of combining chains from MCMCglmm   Joshua Wiley
• [R-sig-ME] Origins of difference in significance between lmer/pvals.fnc and aov?   Dan Ruderman
• [R-sig-ME] calculating number of parameters for AICc   Jude Phillips
  • [R-sig-ME] MCMC mixed models for genetic parameters   Paul Johnson
  • [R-sig-ME] calculating number of parameters for AICc   Ben Bolker
  • [R-sig-ME] calculating number of parameters for AICc   Murray Jorgensen
• [R-sig-ME] model averaging   Paul York
  • [R-sig-ME] model averaging   Ben Bolker
• [R-sig-ME] R-sig-mixed-models Digest, Vol 69, Issue 18   Kumiko Fukumura
  • [R-sig-ME] R-sig-mixed-models Digest, Vol 69, Issue 18   Ben Bolker
• [R-sig-ME] A modeling question for the ecologists   Jeremy Koster
  • [R-sig-ME] A modeling question for the ecologists   Baldwin, Jim -FS
    • [R-sig-ME] A modeling question for the ecologists   Jeremy Koster
    • [R-sig-ME] A modeling question for the ecologists   Jeremy Koster
• [R-sig-ME] Intra-individual variation over time   Eiko Fried
• [R-sig-ME] Seemingly Unrelated Regression in lme4   Stephen Jones
  • [R-sig-ME] Seemingly Unrelated Regression in lme4   Giulia Dotti Sani
    • [R-sig-ME] Seemingly Unrelated Regression in lme4   Stephen Jones
• [R-sig-ME] Multivariate mixed models   Ingleby, Fiona
• [R-sig-ME] Random effects in a nested factorial design - Problems understanding the effect of reference categories   michael.zombok at googlemail.com
• [R-sig-ME] Interpreting the output of summary() of a glmer-object   Hans Ekbrand
  • [R-sig-ME] Interpreting the output of summary() of a glmer-object   Ben Bolker
    • [R-sig-ME] Interpreting the output of summary() of a glmer-object   Hans Ekbrand
      • [R-sig-ME] Interpreting the output of summary() of a glmer-object   Ben Bolker
      • [R-sig-ME] Interpreting the output of summary() of a glmer-object   Hans Ekbrand
• [R-sig-ME] 'Missing' tests for lmer models   Luke Duncan
  • [R-sig-ME] 'Missing' tests for lmer models   David Duffy
• [R-sig-ME] nlme-function: Step halving factor reduced below minimum in PNLS step   Christof Kluß
• [R-sig-ME] questions about the nlme model in R   Douglas Bates
  • [R-sig-ME] questions about the nlme model in R   Margo Law
• [R-sig-ME] Fwd: cross-classified random effects model R code for empirical bayes   Douglas Bates
• [R-sig-ME] cross-classified random effect model   Webster Kasongo
• [R-sig-ME] nlme random effect   Douglas Bates
• [R-sig-ME] cross classified random effect model   Kasongo, Webster
  • [R-sig-ME] gls or lme with unstructured covariance martrix   Freedom Gumedze
• [R-sig-ME] MCMCglmm: correctly estimating phylogenetic heritability   Stott, Iain
• [R-sig-ME] nlme vs nlmer   Christof Kluß
• [R-sig-ME] Sampling methods for MCMCglmm using cengaussian family   Robin Jeffries
  • [R-sig-ME] Sampling methods for MCMCglmm using cengaussian family   Joshua Wiley
    • [R-sig-ME] Sampling methods for MCMCglmm using cengaussian family   Robin Jeffries
      • [R-sig-ME] Sampling methods for MCMCglmm using cengaussian family   Joshua Wiley
• [R-sig-ME] Two Questions re: Piecewise Mixed Effects Models   Lofgren, Eric
  • [R-sig-ME] Two Questions re: Piecewise mixed effects models   Lofgren, Eric
  • [R-sig-ME] Two Questions re: Piecewise Mixed Effects Models   Albyn Jones
  • [R-sig-ME] Two Questions re: Piecewise Mixed Effects Models   Joshua Wiley
• [R-sig-ME] Subject-wise log-likelihood gradient and hessian   Rubem Kaipper Ceratti

Last message date: Sun Sep 30 21:42:13 CEST 2012
Archived on: Mon Oct 1 18:24:50 CEST 2012

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