Second quarter 2014 Archives by thread
      
      Starting: Tue Apr  1 00:44:18 CEST 2014
         Ending: Fri Jun 27 13:51:39 CEST 2014
         Messages: 354
     
- [R-sig-ME] R-sig-mixed-models Digest, Vol 87, Issue 34
 
Malcolm Fairbrother
- [R-sig-ME] Simulating hierarchical data with correlated errors
 
Raluca Gui
- [R-sig-ME] lme4 with simulated hierarchical data with correlated	errors
 
Raluca Gui
- [R-sig-ME] summary fn zero-inflated MCMC models.
 
Hodsoll, John
- [R-sig-ME] Including Nested Factor in Repeated Measures Logistic	Regression
 
Maxwell Elliott
- [R-sig-ME] Use of offset variable when analysing rates in lme4
 
De Waal, C, Mej <caroli at sun.ac.za>
- [R-sig-ME] lme4/glmer convergence warnings
 
W Robert Long
- [R-sig-ME] lme4 convergence warnings and confirmatory path analysis	with hierarchical data
 
Margaret Metz
- [R-sig-ME] Stats courses in Australia
 
Highland Statistics Ltd
- [R-sig-ME] interpreting interactions
 
Joshua Hartshorne
- [R-sig-ME] glmer output
 
Moshiur Rahman
- [R-sig-ME] Query on predicting from GLMM to new data with a different range of values of the random term
 
Alice Jones
- [R-sig-ME] questions about how to incorporate survey weights into multilevel model and etc.
 
Sang Won Han
- [R-sig-ME] Logarithmic Mixed Models?
 
AvianResearchDivision
- [R-sig-ME] lme4 and solve(Hessian,	gradient) check: Discrepancies between AMD/Intel/32bit/64bit?
 
Tom Davis
- [R-sig-ME] Reconciling Near Identical AIC Values and Highly	Significant P Value
 
AvianResearchDivision
- [R-sig-ME] Reconciling Near Identical AIC Values and Highly
 
Elizabeth Crone
- [R-sig-ME] Individual coef() not congruent with panel plot of data
 
AvianResearchDivision
- [R-sig-ME] difficulty fitting a model with nlme()
 
Anne Hoen
- [R-sig-ME] Reconciling Near Identical AIC Values and Highly Significant P Value (Ben Bolker)
 
Ed Merkle
- [R-sig-ME] MCMC prior issues
 
David Bradley
- [R-sig-ME] sum coding, omnibus tests for GLMMs, and pvalues for LMMs
 
David Sears
- [R-sig-ME] Power Analysis for Linear Mixed Model with Covariates
 
Gerasimos Fergadiotis
- [R-sig-ME] hard in lmer(),how to set parameter in lmer()
 
王唯
- [R-sig-ME] Model selection GLM vs. GLMMs
 
Nelida Villasenor
- [R-sig-ME] Installing an old version of lme4 (v 0.999999-2)
 
Javan Bauder
- [R-sig-ME] Is this a legitimate approach
 
Junyan Luo
- [R-sig-ME] Model specification (fixed and random effects)?
 
Yla Savh
- [R-sig-ME] Mixed-effects conditional logistic regression in lme4 v.	1.0-4 and above
 
Javan Bauder
- [R-sig-ME] error distribution or transformation for Acid-neutralizing-capacity (ANC)
 
Brooks Miner
- [R-sig-ME] example of confidence intervals for predicted values?
 
Paul Johnson
- [R-sig-ME] Calculate % Variance Attributed to Random Slopes	(Phenotypic Plasticity)
 
AvianResearchDivision
- [R-sig-ME] multinomial model with MCMCglmm by using gelman.prior
 
Saussac Mathilde
- [R-sig-ME] Profile likelihood using R2admb
 
Stirrup, Oliver
- [R-sig-ME] Fitting Non linear mixed effects models
 
Ernest William Mauya
- [R-sig-ME] Should I use GLMM?
 
Rodrigo Tardin
- [R-sig-ME] reporting parameter estimates for factors using	sum/deviation coding
 
David Sears
- [R-sig-ME] error message in pamer.fnc
 
xiaoming jiang
- [R-sig-ME] glmerMod with covariance matrix set to 0?
 
Elizabeth Crone
- [R-sig-ME] Fwd: Multi Processor / lme4
 
Ben Bolker
- [R-sig-ME] [R] lme4 Error Help: “maxstephalfit…pwrssUpdate”
 
ONKELINX, Thierry
- [R-sig-ME] FW: linear mixed model for non-normal negative and	continous data
 
Caroline Lustenberger
- [R-sig-ME] [R] linear mixed model for non-normal negative and continous data
 
ONKELINX, Thierry
- [R-sig-ME] confint.merMod()  problem.
 
Zaslavsky, Alan M.
- [R-sig-ME] Comparison of 2 treatments
 
Hamada Elsayed Ali
- [R-sig-ME] gamm4 error with large dataset
 
Daniel Hocking
- [R-sig-ME] previous posts about error message in glmmADMB
 
Lena
- [R-sig-ME] MCMCglmm: starting values and variance explained by	random effects
 
Mieke Zwart
- [R-sig-ME] extract specific values from lmer summary
 
Ben Bolker
- [R-sig-ME] [Lme4-authors] Fixing the level 1 residual variance
 
Ben Bolker
- [R-sig-ME] standardized coefficients in lme4 package
 
Simon Sun
- [R-sig-ME] Why do extremely similar parametric bootstraps on lmer() objects yield (not only marginally) different results?
 
Christian Brauner
- [R-sig-ME] BOBYQA warning message
 
Devin Kearns
- [R-sig-ME] p values for random effects in an unbalanced nested	mixed model
 
Stacey Williams
- [R-sig-ME] Fwd: Re: extract specific values from lmer summary
 
Ben Bolker
- [R-sig-ME] glmmADMB zero-inflated poisson model. How to solve
 
laura laura
- [R-sig-ME] Accessing and updating lmer objects
 
Asaf Weinstein
- [R-sig-ME] pedigreemm with one observation per individual
 
Witold Proskura
- [R-sig-ME] conditional AIC (cAIC) for lmer
 
John.Morrongiello at csiro.au
- [R-sig-ME] difference in lmer results with REML = FALSE and refitML
 
Henrik Singmann
- [R-sig-ME] Zero alteration and mixed models?
 
Kirsty Gurney
- [R-sig-ME] lme4 question
 
Francis, David
- [R-sig-ME] Significance of fixed effects. Kinship package (Marc	Moragues)
 
Witold Proskura
- [R-sig-ME] Can an uninformative prior be too diffuse?
 
Iain Stott
- [R-sig-ME] glmer syntax for model with "common" random effects
 
orzack at freshpond.org
- [R-sig-ME] Diagnosing Overdispersion in Mixed Models with	Parametric Bootstrapping
 
Xavier Harrison
- [R-sig-ME] Assumptions of GLMMs
 
Baggett, Aaron
- [R-sig-ME] Doubts about models in glmmADMB
 
Carlos Barboza
- [R-sig-ME] accounting for overdispersion in binary GLMM in lme4
 
Thomas Merkling
- [R-sig-ME] ANOVA type lll ss table for GLMER?
 
Heather Moylett
- [R-sig-ME] Wrong convergence warnings with glmer in lme4 version	1.1-6??
 
UG
- [R-sig-ME] error en glmmadmb
 
CRISTINA.COCCIA
- [R-sig-ME] fixed effects estimates too small in binomial GLMM with	low "success"-rate
 
Henrik Singmann
- [R-sig-ME] "parm" parameter in lme4::confint.merMod
 
Jake Westfall
- [R-sig-ME] Course: Introduction to GAM and GAMM with R
 
Highland Statistics Ltd
- [R-sig-ME] fixed effects estimates too small in binomial GLMM with	low "success"-rate (
 
Solis
- [R-sig-ME] starting value setting in glmer
 
Ben Bolker
- [R-sig-ME] [Lme4-authors] A Question Regarding a Warning Message Generated from Fitting a 'glmer' Model
 
lme4 maintainer
- [R-sig-ME] Variance of predictions from lme4 models at existing	levels?
 
Julien Riou
- [R-sig-ME] transformation of BLUPs to response scale
 
John.Morrongiello at csiro.au
- [R-sig-ME] about the glmer function
 
lme4 maintainer
- [R-sig-ME] Assessing Normality for Mixed Models
 
AvianResearchDivision
- [R-sig-ME] Calculations and interpretation of ordered logit model with clmm() and related functions
 
Christian Brauner
- [R-sig-ME] ] Zero inflated mixed model with constraint (lasso or	other)
 
guillaume chaumet
- [R-sig-ME] recent message not posted
 
John Kingston
- [R-sig-ME] glmer warning "fixed-effect model matrix is rank	deficient"
 
Dan McCloy
- [R-sig-ME] How to interpret verbose output
 
Stuart Luppescu
- [R-sig-ME] Zero inflated mixed model with constraint (lasso or	other)
 
guillaume chaumet
- [R-sig-ME] Getting each bootstrapped data frame from bootMer
 
Daniel J Hocking
- [R-sig-ME] Previous messageNext messageBack to messages Post-hoc tests on linear mixed model give mixed results.
 
Claire
- [R-sig-ME] negative Hessian eigenvalues
 
Tobias Heed
- [R-sig-ME] Help: mixed model with nested structure
 
Zia Ahmed
- [R-sig-ME] Fwd: Re: Regions of significance plot for multilevel logistic regression model
 
Ben Bolker
- [R-sig-ME] LMER
 
Ben Bolker
- [R-sig-ME] {dsm} warning message "step size truncated due to	divergence"
 
Ricardo Lima
- [R-sig-ME] false positives?
 
John Kingston
- [R-sig-ME] update to previous message about false positives
 
John Kingston
- [R-sig-ME] Coefplot2 availability? or How to interpret?
 
Lucinda Kirkpatrick
- [R-sig-ME] Mixed modelling and GLMM course in Banff, Canada
 
Highland Statistics Ltd
- [R-sig-ME] Anomalous results with glmer().
 
Rolf Turner
- [R-sig-ME] following up reply regarding false positives
 
John Kingston
- [R-sig-ME] citable references for profile likelihood CIs
 
Jake Westfall
- [R-sig-ME] [Lme4-authors] lmer/glmer false positive in	convergence problems
 
Ben Bolker
- [R-sig-ME] reference for expression given on glmm wiki
 
Juliet Hannah
- [R-sig-ME] repeated-measures mixed models
 
Ligia Pizzatto do Prado
- [R-sig-ME] lme4 performance
 
Gabor Grothendieck
- [R-sig-ME] Solving sparse linear systems
 
Asaf Weinstein
- [R-sig-ME] glmer model with independent random effects
 
Thomas Debray
- [R-sig-ME] Power analysis for a LMM with unbalanced data and	continuous covariates
 
Jackie Wood
- [R-sig-ME] genetic distance as covariance matrix through ginverse?
 
Dean Castillo
- [R-sig-ME] Assistance with specification of crossover design model
 
Adam Smith
- [R-sig-ME] rpt.remlLMM(y, groups) causes R to crash
 
AvianResearchDivision
- [R-sig-ME] Reformat: Assistance with specification of crossover	design model
 
Adam Smith
- [R-sig-ME] glmmADMB dude
 
Noelia Zarza Moratalla
- [R-sig-ME] uninformative priors for a threshold model estimated	with MCMCglmm?
 
Malcolm Fairbrother
- [R-sig-ME] anova() and the difference between (x | y) and (1 | y:x)	in lme4
 
Hans Ekbrand
- [R-sig-ME] Laplace approximation
 
Jarrod Hadfield
- [R-sig-ME] Is there a way of getting “marginal effects” from a `glmer` object
 
Prof. Karthik D.
- [R-sig-ME] Random Intercept + random slope model yields exactly the same results as random slope
 
Ulf Mertens
- [R-sig-ME] Fwd: lme4 convergence warnings
 
Sofía Brandariz
- [R-sig-ME] gamm4: predict to reflect random effects?
 
Mollie Brooks
- [R-sig-ME] Error using MuMIn dredge with glmer.nb
 
Fiona Mae Caryl
- [R-sig-ME] lmer/pamer.fnc error
 
Richa Bharti
- [R-sig-ME] simulation of grouped data
 
mervat mohamed
- [R-sig-ME] (no subject)
 
mervat mohamed
- [R-sig-ME] No residual variance using MCMCglmm
 
Céline Teplitsky
- [R-sig-ME] Henderson iterations for random slopes
 
Jonathon D. Brown
- [R-sig-ME] How can I estimate deviance explained of a mixed gamm?
 
Jon Lopez
- [R-sig-ME] Convert nlme formula to nlmer
 
Roxane Foulser-Piggott
- [R-sig-ME] glmmADMB does not run
 
Miguel Barbosa
- [R-sig-ME] upcoming release of lme4 1.1-7
 
Ben Bolker
- [R-sig-ME] pedigreemm number of levels per grouping factor
 
Ana Ines Vazquez
- [R-sig-ME] MCMCglmm error message:Error in `[.data.frame undefined columns selected
 
PATRICK, Samantha
- [R-sig-ME] Obtaining X beta + Zb
 
Asaf Weinstein
- [R-sig-ME] Problems fitting a hurdle model using glmmADMB
 
Shawn O'Neil
- [R-sig-ME] Wieght MAtrix in Error term in MCMCglmm
 
Linus Holtermann
- [R-sig-ME] lsmeans in glmmADMB
 
Lenth, Russell V
- [R-sig-ME] Variance component specification
 
Daniel Anderson
- [R-sig-ME] Mixed Model Specification
 
Worthington, Thomas A
- [R-sig-ME] glmmadmb instead of glmer to avoid convergence warnings	in lme4
 
Lisa Rummel
    
      Last message date: 
       Fri Jun 27 13:51:39 CEST 2014
    Archived on: Fri Jun 27 13:51:50 CEST 2014
    
   
     
     
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