Second quarter 2014 Archives by thread
Starting: Tue Apr 1 00:44:18 CEST 2014
Ending: Fri Jun 27 13:51:39 CEST 2014
Messages: 354
- [R-sig-ME] R-sig-mixed-models Digest, Vol 87, Issue 34
Malcolm Fairbrother
- [R-sig-ME] Simulating hierarchical data with correlated errors
Raluca Gui
- [R-sig-ME] lme4 with simulated hierarchical data with correlated errors
Raluca Gui
- [R-sig-ME] summary fn zero-inflated MCMC models.
Hodsoll, John
- [R-sig-ME] Including Nested Factor in Repeated Measures Logistic Regression
Maxwell Elliott
- [R-sig-ME] Use of offset variable when analysing rates in lme4
De Waal, C, Mej <caroli at sun.ac.za>
- [R-sig-ME] lme4/glmer convergence warnings
W Robert Long
- [R-sig-ME] lme4 convergence warnings and confirmatory path analysis with hierarchical data
Margaret Metz
- [R-sig-ME] Stats courses in Australia
Highland Statistics Ltd
- [R-sig-ME] interpreting interactions
Joshua Hartshorne
- [R-sig-ME] glmer output
Moshiur Rahman
- [R-sig-ME] Query on predicting from GLMM to new data with a different range of values of the random term
Alice Jones
- [R-sig-ME] questions about how to incorporate survey weights into multilevel model and etc.
Sang Won Han
- [R-sig-ME] Logarithmic Mixed Models?
AvianResearchDivision
- [R-sig-ME] lme4 and solve(Hessian, gradient) check: Discrepancies between AMD/Intel/32bit/64bit?
Tom Davis
- [R-sig-ME] Reconciling Near Identical AIC Values and Highly Significant P Value
AvianResearchDivision
- [R-sig-ME] Reconciling Near Identical AIC Values and Highly
Elizabeth Crone
- [R-sig-ME] Individual coef() not congruent with panel plot of data
AvianResearchDivision
- [R-sig-ME] difficulty fitting a model with nlme()
Anne Hoen
- [R-sig-ME] Reconciling Near Identical AIC Values and Highly Significant P Value (Ben Bolker)
Ed Merkle
- [R-sig-ME] MCMC prior issues
David Bradley
- [R-sig-ME] sum coding, omnibus tests for GLMMs, and pvalues for LMMs
David Sears
- [R-sig-ME] Power Analysis for Linear Mixed Model with Covariates
Gerasimos Fergadiotis
- [R-sig-ME] hard in lmer(),how to set parameter in lmer()
王唯
- [R-sig-ME] Model selection GLM vs. GLMMs
Nelida Villasenor
- [R-sig-ME] Installing an old version of lme4 (v 0.999999-2)
Javan Bauder
- [R-sig-ME] Is this a legitimate approach
Junyan Luo
- [R-sig-ME] Model specification (fixed and random effects)?
Yla Savh
- [R-sig-ME] Mixed-effects conditional logistic regression in lme4 v. 1.0-4 and above
Javan Bauder
- [R-sig-ME] error distribution or transformation for Acid-neutralizing-capacity (ANC)
Brooks Miner
- [R-sig-ME] example of confidence intervals for predicted values?
Paul Johnson
- [R-sig-ME] Calculate % Variance Attributed to Random Slopes (Phenotypic Plasticity)
AvianResearchDivision
- [R-sig-ME] multinomial model with MCMCglmm by using gelman.prior
Saussac Mathilde
- [R-sig-ME] Profile likelihood using R2admb
Stirrup, Oliver
- [R-sig-ME] Fitting Non linear mixed effects models
Ernest William Mauya
- [R-sig-ME] Should I use GLMM?
Rodrigo Tardin
- [R-sig-ME] reporting parameter estimates for factors using sum/deviation coding
David Sears
- [R-sig-ME] error message in pamer.fnc
xiaoming jiang
- [R-sig-ME] glmerMod with covariance matrix set to 0?
Elizabeth Crone
- [R-sig-ME] Fwd: Multi Processor / lme4
Ben Bolker
- [R-sig-ME] [R] lme4 Error Help: “maxstephalfit…pwrssUpdate”
ONKELINX, Thierry
- [R-sig-ME] FW: linear mixed model for non-normal negative and continous data
Caroline Lustenberger
- [R-sig-ME] [R] linear mixed model for non-normal negative and continous data
ONKELINX, Thierry
- [R-sig-ME] confint.merMod() problem.
Zaslavsky, Alan M.
- [R-sig-ME] Comparison of 2 treatments
Hamada Elsayed Ali
- [R-sig-ME] gamm4 error with large dataset
Daniel Hocking
- [R-sig-ME] previous posts about error message in glmmADMB
Lena
- [R-sig-ME] MCMCglmm: starting values and variance explained by random effects
Mieke Zwart
- [R-sig-ME] extract specific values from lmer summary
Ben Bolker
- [R-sig-ME] [Lme4-authors] Fixing the level 1 residual variance
Ben Bolker
- [R-sig-ME] standardized coefficients in lme4 package
Simon Sun
- [R-sig-ME] Why do extremely similar parametric bootstraps on lmer() objects yield (not only marginally) different results?
Christian Brauner
- [R-sig-ME] BOBYQA warning message
Devin Kearns
- [R-sig-ME] p values for random effects in an unbalanced nested mixed model
Stacey Williams
- [R-sig-ME] Fwd: Re: extract specific values from lmer summary
Ben Bolker
- [R-sig-ME] glmmADMB zero-inflated poisson model. How to solve
laura laura
- [R-sig-ME] Accessing and updating lmer objects
Asaf Weinstein
- [R-sig-ME] pedigreemm with one observation per individual
Witold Proskura
- [R-sig-ME] conditional AIC (cAIC) for lmer
John.Morrongiello at csiro.au
- [R-sig-ME] difference in lmer results with REML = FALSE and refitML
Henrik Singmann
- [R-sig-ME] Zero alteration and mixed models?
Kirsty Gurney
- [R-sig-ME] lme4 question
Francis, David
- [R-sig-ME] Significance of fixed effects. Kinship package (Marc Moragues)
Witold Proskura
- [R-sig-ME] Can an uninformative prior be too diffuse?
Iain Stott
- [R-sig-ME] glmer syntax for model with "common" random effects
orzack at freshpond.org
- [R-sig-ME] Diagnosing Overdispersion in Mixed Models with Parametric Bootstrapping
Xavier Harrison
- [R-sig-ME] Assumptions of GLMMs
Baggett, Aaron
- [R-sig-ME] Doubts about models in glmmADMB
Carlos Barboza
- [R-sig-ME] accounting for overdispersion in binary GLMM in lme4
Thomas Merkling
- [R-sig-ME] ANOVA type lll ss table for GLMER?
Heather Moylett
- [R-sig-ME] Wrong convergence warnings with glmer in lme4 version 1.1-6??
UG
- [R-sig-ME] error en glmmadmb
CRISTINA.COCCIA
- [R-sig-ME] fixed effects estimates too small in binomial GLMM with low "success"-rate
Henrik Singmann
- [R-sig-ME] "parm" parameter in lme4::confint.merMod
Jake Westfall
- [R-sig-ME] Course: Introduction to GAM and GAMM with R
Highland Statistics Ltd
- [R-sig-ME] fixed effects estimates too small in binomial GLMM with low "success"-rate (
Solis
- [R-sig-ME] starting value setting in glmer
Ben Bolker
- [R-sig-ME] [Lme4-authors] A Question Regarding a Warning Message Generated from Fitting a 'glmer' Model
lme4 maintainer
- [R-sig-ME] Variance of predictions from lme4 models at existing levels?
Julien Riou
- [R-sig-ME] transformation of BLUPs to response scale
John.Morrongiello at csiro.au
- [R-sig-ME] about the glmer function
lme4 maintainer
- [R-sig-ME] Assessing Normality for Mixed Models
AvianResearchDivision
- [R-sig-ME] Calculations and interpretation of ordered logit model with clmm() and related functions
Christian Brauner
- [R-sig-ME] ] Zero inflated mixed model with constraint (lasso or other)
guillaume chaumet
- [R-sig-ME] recent message not posted
John Kingston
- [R-sig-ME] glmer warning "fixed-effect model matrix is rank deficient"
Dan McCloy
- [R-sig-ME] How to interpret verbose output
Stuart Luppescu
- [R-sig-ME] Zero inflated mixed model with constraint (lasso or other)
guillaume chaumet
- [R-sig-ME] Getting each bootstrapped data frame from bootMer
Daniel J Hocking
- [R-sig-ME] Previous messageNext messageBack to messages Post-hoc tests on linear mixed model give mixed results.
Claire
- [R-sig-ME] negative Hessian eigenvalues
Tobias Heed
- [R-sig-ME] Help: mixed model with nested structure
Zia Ahmed
- [R-sig-ME] Fwd: Re: Regions of significance plot for multilevel logistic regression model
Ben Bolker
- [R-sig-ME] LMER
Ben Bolker
- [R-sig-ME] {dsm} warning message "step size truncated due to divergence"
Ricardo Lima
- [R-sig-ME] false positives?
John Kingston
- [R-sig-ME] update to previous message about false positives
John Kingston
- [R-sig-ME] Coefplot2 availability? or How to interpret?
Lucinda Kirkpatrick
- [R-sig-ME] Mixed modelling and GLMM course in Banff, Canada
Highland Statistics Ltd
- [R-sig-ME] Anomalous results with glmer().
Rolf Turner
- [R-sig-ME] following up reply regarding false positives
John Kingston
- [R-sig-ME] citable references for profile likelihood CIs
Jake Westfall
- [R-sig-ME] [Lme4-authors] lmer/glmer false positive in convergence problems
Ben Bolker
- [R-sig-ME] reference for expression given on glmm wiki
Juliet Hannah
- [R-sig-ME] repeated-measures mixed models
Ligia Pizzatto do Prado
- [R-sig-ME] lme4 performance
Gabor Grothendieck
- [R-sig-ME] Solving sparse linear systems
Asaf Weinstein
- [R-sig-ME] glmer model with independent random effects
Thomas Debray
- [R-sig-ME] Power analysis for a LMM with unbalanced data and continuous covariates
Jackie Wood
- [R-sig-ME] genetic distance as covariance matrix through ginverse?
Dean Castillo
- [R-sig-ME] Assistance with specification of crossover design model
Adam Smith
- [R-sig-ME] rpt.remlLMM(y, groups) causes R to crash
AvianResearchDivision
- [R-sig-ME] Reformat: Assistance with specification of crossover design model
Adam Smith
- [R-sig-ME] glmmADMB dude
Noelia Zarza Moratalla
- [R-sig-ME] uninformative priors for a threshold model estimated with MCMCglmm?
Malcolm Fairbrother
- [R-sig-ME] anova() and the difference between (x | y) and (1 | y:x) in lme4
Hans Ekbrand
- [R-sig-ME] Laplace approximation
Jarrod Hadfield
- [R-sig-ME] Is there a way of getting “marginal effects” from a `glmer` object
Prof. Karthik D.
- [R-sig-ME] Random Intercept + random slope model yields exactly the same results as random slope
Ulf Mertens
- [R-sig-ME] Fwd: lme4 convergence warnings
Sofía Brandariz
- [R-sig-ME] gamm4: predict to reflect random effects?
Mollie Brooks
- [R-sig-ME] Error using MuMIn dredge with glmer.nb
Fiona Mae Caryl
- [R-sig-ME] lmer/pamer.fnc error
Richa Bharti
- [R-sig-ME] simulation of grouped data
mervat mohamed
- [R-sig-ME] (no subject)
mervat mohamed
- [R-sig-ME] No residual variance using MCMCglmm
Céline Teplitsky
- [R-sig-ME] Henderson iterations for random slopes
Jonathon D. Brown
- [R-sig-ME] How can I estimate deviance explained of a mixed gamm?
Jon Lopez
- [R-sig-ME] Convert nlme formula to nlmer
Roxane Foulser-Piggott
- [R-sig-ME] glmmADMB does not run
Miguel Barbosa
- [R-sig-ME] upcoming release of lme4 1.1-7
Ben Bolker
- [R-sig-ME] pedigreemm number of levels per grouping factor
Ana Ines Vazquez
- [R-sig-ME] MCMCglmm error message:Error in `[.data.frame undefined columns selected
PATRICK, Samantha
- [R-sig-ME] Obtaining X beta + Zb
Asaf Weinstein
- [R-sig-ME] Problems fitting a hurdle model using glmmADMB
Shawn O'Neil
- [R-sig-ME] Wieght MAtrix in Error term in MCMCglmm
Linus Holtermann
- [R-sig-ME] lsmeans in glmmADMB
Lenth, Russell V
- [R-sig-ME] Variance component specification
Daniel Anderson
- [R-sig-ME] Mixed Model Specification
Worthington, Thomas A
- [R-sig-ME] glmmadmb instead of glmer to avoid convergence warnings in lme4
Lisa Rummel
Last message date:
Fri Jun 27 13:51:39 CEST 2014
Archived on: Fri Jun 27 13:51:50 CEST 2014
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