Third quarter 2014 Archives by thread
      
      Starting: Tue Jul  1 06:21:33 CEST 2014
         Ending: Tue Sep 30 18:39:55 CEST 2014
         Messages: 410
     
- [R-sig-ME] LRT on fixed-effects
 
Matías Muñoz
 - [R-sig-ME] LRT on fixed-effects (Mat?as Mu?oz)
 
Joel Chan
 - [R-sig-ME] R2admb-package
 
Ben Bolker
 - [R-sig-ME] Manipulating Compound Symmetry
 
Ulf Mertens
 - [R-sig-ME] help: different p-values from z-statistic and anova in	coxme
 
ChenChun
 - [R-sig-ME] [Lme4-authors] Error in lme4 package
 
Ben Bolker
 - [R-sig-ME] Using glmm for penalised spline model
 
Richman, Ronald
 - [R-sig-ME] glmer convergence warning
 
bob martin
 - [R-sig-ME] Getting the error message: Error: (maxstephalfit) PIRLS step-halvings failed to reduce deviance in pwrssUpdate when trying to fit glmer to my data
 
Nimrod Rubinstein
 - [R-sig-ME] How to extract convergence code from lmer object?
 
Ben Bolker
 - [R-sig-ME] gls function - goodness of fit
 
Hebert, Issac (MNR)
 - [R-sig-ME] A question on item random effects
 
Anastasiia Romanova
 - [R-sig-ME] visualising interaction with predict.merMod
 
Richard Zijdeman
 - [R-sig-ME] No residual variance using MCMCglmm
 
Céline Teplitsky
 - [R-sig-ME] Help with pdMat constructors in nlme
 
Daniel Fulop
 - [R-sig-ME] gamm4 model fit error
 
Nicholas Lange
 - [R-sig-ME] Checking modeling assumptions in a binomial GLMM
 
Ravi Varadhan
 - [R-sig-ME] gamm4: extract the (x,y) values of the plotted smooth
 
Nick Lange
 - [R-sig-ME] Very important question regarding the error while	using library(lme4)
 
Ben Bolker
 - [R-sig-ME] How to deal with Hessian error if the model only contains binomial (0, 1) fixed factors?
 
Julia Sommerfeld
 - [R-sig-ME] glmmADMB package
 
Rajibul Mian
 - [R-sig-ME] Same variable as both fixed and random
 
Stephen Mayor
 - [R-sig-ME] New book: Beginner's Guide to GAMM with R
 
Highland Statistics Ltd
 - [R-sig-ME] Question regarding the estimation of the correlation between random intercepts and random slopes in the lme4 package
 
Inga Schwabe
 - [R-sig-ME] Significance of Repeatablity Estimates
 
Ben Bolker
 - [R-sig-ME] Accuracy of Va estimates using univariate versus multivariate animal model
 
chantepie at mnhn.fr
 - [R-sig-ME] How is the covariance factor computed?
 
Christian Brauner
 - [R-sig-ME] Negative binomial in glmmadmb
 
Ben Bolker
 - [R-sig-ME] [R] Checking modeling assumptions in a binomial GLMM
 
Ben Bolker
 - [R-sig-ME] question about lme4
 
Ben Bolker
 - [R-sig-ME] LMM: including ranef or not?
 
Anna-Marie Corman
 - [R-sig-ME] lmer Control Parameters Question
 
Douglas Bates
 - [R-sig-ME]  Question on semiparametric bootstrap in lme4
 
Mark Lai
 - [R-sig-ME] Mixed effect models for a study with no (real)	replication
 
Marco Plebani
 - [R-sig-ME] Error in Profile likelihood based confidence intervals	in glmer()
 
Ravi Varadhan
 - [R-sig-ME] MCMCglmm prior specification
 
Tanya Pennell
 - [R-sig-ME] Install flexlambda- and master-lme4 from Github
 
Christian Brauner
 - [R-sig-ME] glmer z values binomial data
 
Clelia Gasparini
 - [R-sig-ME] Mixed-effects Model - LMER - Plot of estimated Mean and	CI
 
Ofer Agai
 - [R-sig-ME] Providing starting values for glmer()
 
Ben Bolker
 - [R-sig-ME] MCMCglmm question: multivariate model
 
Martina Carrete
 - [R-sig-ME] Cbind and taxa rows trouble in MCMCglmm
 
Nick Clark
 - [R-sig-ME] longitudinal analysis covariance or mixed model approach
 
espesser
 - [R-sig-ME] MCMCglmm predict function output and interpretation
 
Justine Smith
 - [R-sig-ME] How to check if the interaction term is significant?
 
geetha venkatesh
 - [R-sig-ME] Looking for an effect of relatedness in non-normal data	(MCMCglmm)
 
Megan Bartlett
 - [R-sig-ME] Calculating upper and lower confidence limits on a population estimate derived from multiple point estimates
 
Reuben Smit
 - [R-sig-ME] Pseudoreplication in a factorial GLM with a proportional response variable and categorical predictor variables
 
Berin Mackenzie
 - [R-sig-ME] lme and lmer
 
Nicholas Burgoyne
 - [R-sig-ME] lme4.0 vs. lme4 version 1.1-7: newer version returns inflated SE using glmer() with bobyqa optimizer
 
Chiara Gambi
 - [R-sig-ME] Random effect on only one of the response variables in	bivariate LMM (MCMCglmm)
 
Nicolas Rode
 - [R-sig-ME] Testing goodness of fit for GLMM model
 
Yuki Fujita
 - [R-sig-ME] Goodness of fit test for GLMM
 
yuki fujita
 - [R-sig-ME] lme4 vs nlme
 
Nicholas Burgoyne
 - [R-sig-ME] Standard errors in generalised linear mixed models?
 
Felix Suessenbach
 - [R-sig-ME] Random slopes for logistic mixed effects model; BoxCox transformation
 
Yasuaki SHINOHARA
 - [R-sig-ME] Weighting observations by sampling size in lmer
 
Javan Bauder
 - [R-sig-ME] parallel MCMCglmm execution
 
Ruben Arslan
- [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
 
Ruben Arslan
- [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
 
Jarrod Hadfield
- [R-sig-ME] parallel MCMCglmm, RNGstreams,	starting values & priors
 
Ruben Arslan
 - [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
 
Jarrod Hadfield
 - [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
 
Jarrod Hadfield
 - [R-sig-ME] parallel MCMCglmm, RNGstreams,	starting values & priors
 
Ruben Arslan
 - [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
 
Jarrod Hadfield
 - [R-sig-ME] parallel MCMCglmm, RNGstreams,	starting values & priors
 
Ruben Arslan
 - [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
 
Jarrod Hadfield
 - [R-sig-ME] parallel MCMCglmm, RNGstreams,	starting values & priors
 
Ruben Arslan
 - [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
 
Jarrod Hadfield
 - [R-sig-ME] parallel MCMCglmm, RNGstreams,	starting values & priors
 
Ruben Arslan
 - [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
 
Jarrod Hadfield
 - [R-sig-ME] parallel MCMCglmm, RNGstreams,	starting values & priors
 
Ruben Arslan
 - [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
 
Jarrod Hadfield
 - [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
 
Jarrod Hadfield
 - [R-sig-ME] parallel MCMCglmm, RNGstreams,	starting values & priors
 
Ruben Arslan
 - [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
 
Jarrod Hadfield
 - [R-sig-ME] parallel MCMCglmm, RNGstreams,	starting values & priors
 
Ruben Arslan
 - [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
 
Jarrod Hadfield
 
 
 
 - [R-sig-ME] Looking for differences in G structure among factor	levels
 
Diego
 - [R-sig-ME] Error: (maxstephalfit) PIRLS step-halvings failed to reduce deviance in pwrssUpdate
 
Kirsty McLaughlin
 - [R-sig-ME] FW: Error: (maxstephalfit) PIRLS step-halvings failed to reduce deviance in pwrssUpdate
 
Kirsty McLaughlin
 - [R-sig-ME] autocorrelated errors
 
Paul Johnson
 - [R-sig-ME] lmer not working
 
Georgina Brennan
 - [R-sig-ME] R-sig-mixed-models Digest, Vol 92, Issue 6
 
Malcolm Fairbrother
 - [R-sig-ME] discrepency with paired test when adding concordant paired data to lmer()
 
E.W.Tobi at lumc.nl
 - [R-sig-ME] Model diagnostics for a glmmadmb negative binomial
 
Reuben Smit
 - [R-sig-ME] tolPwrss threshold
 
Zofia Ecaterina Taranu
 - [R-sig-ME] Summary of Subgroups
 
Shankar Lanke
 - [R-sig-ME] Non-conformable arguments while predicting with	glmmadmb_model
 
Reuben Smit
 - [R-sig-ME] Group size in mixed/multilevel model: How to obtain	weighted effects.
 
Henrik Singmann
 - [R-sig-ME] confidence intervals for random slopes
 
Bokony Veronika
 - [R-sig-ME] using Poisson glmer for non-integer data
 
Ben Bolker
 - [R-sig-ME] Bivariate MCMCglmm with repeated measures
 
PATRICK, Samantha
 - [R-sig-ME] Random slope/intercept without correlation in lmer
 
Gustaf Granath
 - [R-sig-ME] Specifying a repeated-measure design with 3 fully crossed within-subject factors
 
Michael Cone
 - [R-sig-ME] Random effect variance = zero
 
Aurore Paligot
 - [R-sig-ME] Multivariate multinomial in MCMCglmm
 
Szymek Drobniak
 - [R-sig-ME] PredictSE.mer error message
 
yuki fujita
 - [R-sig-ME] "bootstrap runs failed" in bootMer within confint.merMod
 
Paul Johnson
 - [R-sig-ME] random vs fixed effects and glmer model simplification
 
Saoirse Preston
 - [R-sig-ME] lmer random and fixed effect?
 
Charles Determan Jr
 - [R-sig-ME] [R] lqmm - package: Error in f(arg, …) : NA/NaN/Inf in foreign function call (arg 1)
 
florian k.
 - [R-sig-ME] bootMer: 2 questions about generating standard errors in	lme4
 
Jeffrey Evans
 - [R-sig-ME] discrepency paired test and lmer()
 
E.W.Tobi at lumc.nl
 - [R-sig-ME] (no subject)
 
Richa Bharti
 - [R-sig-ME] looking for differencies in G structure among factor	levels using MCMCglmm
 
Diego Carmona
 - [R-sig-ME] Trivariate MCMCglmm
 
Gemma Palomar García
 - [R-sig-ME] Model tree with random effects
 
Roelof Coster
 - [R-sig-ME] Getting intraclass correlations from a binomial mixed model with logit link
 
Ulf Köther
 - [R-sig-ME] [Lme4-authors] installing 1.1-7
 
Ben Bolker
 - [R-sig-ME] GlMM for ordinal and pseudo replication
 
Ben Bolker
 - [R-sig-ME] Mixed model for ordinal data with pseudo replication
 
Mehdi Abedi
 - [R-sig-ME] question about lme4 and nlme
 
Niu, Mu
 - [R-sig-ME] help on choosin right model for data
 
Josipa Perković
 - [R-sig-ME] Deviance residuals don't sum up to deviance
 
Roelof Coster
 - [R-sig-ME] RE : Generalized mixed effects models
 
Douglas Bates
 - [R-sig-ME] glmer
 
PLUQUET Thibault
 - [R-sig-ME] How to fix the value of random intercepts (lmer/MCMCglmm)
 
PATRICK, Samantha
 - [R-sig-ME] Binomial GLMM or GAMM with random intercept and temporal	correlation
 
Samantha Cox
 - [R-sig-ME] multilevel analysis with sample weighted data
 
Rodrigo Travitzki
 - [R-sig-ME] Random effects in clmm() of package ordinal
 
Christian Brauner
 - [R-sig-ME] R-sig-mixed-models Digest, Vol 92, Issue 45
 
Corey Sparks
 - [R-sig-ME] Analysing data with an ordinal response
 
Christian Brauner
 - [R-sig-ME] glmer error: contrasts can only be applied to factors of	2 or more levels
 
Dan McCloy
 - [R-sig-ME] WG: lme4: prediction for glmer model
 
Meid, Andreas
 - [R-sig-ME] Post model fitting checks in Metafor (rma.mv)
 
Shona Smith
 - [R-sig-ME] zeroinflated poisson GLM(M) in JAGS
 
Ulf Köther
 - [R-sig-ME] Four available places on GLMM course in Banff
 
Highland Statistics Ltd
 - [R-sig-ME] Nested random effect or unbalanced design?
 
Leppänen Ilkka
 - [R-sig-ME] glmmADMB - User Guide
 
Ben Bolker
 - [R-sig-ME] family() in probit-glmer
 
Alessandro Moscatelli
 - [R-sig-ME] glmer takes long time even after restricting iterations
 
Prachi Sanghavi
 - [R-sig-ME] Errors message from glmmADMB package: Zero Inflated, Negative Binomial for large panel dataset
 
Leo Yanes
 - [R-sig-ME] lmer() with 'na.action=na.exclude'; error with summary()
 
John Maindonald
 - [R-sig-ME] Influence of the random effects on fixed effect estimates in mixed models and interpretation of fixed effects in relation to random effects.
 
Tom Wilding
 - [R-sig-ME] Using lmer on an augmented alpha square model
 
Morrison, Ginnie D.
 - [R-sig-ME] Warning message in glmmADMB
 
Moshiur Rahman
 - [R-sig-ME] Comparisons of models with and without a threshold
 
Christian Starzynski
 - [R-sig-ME] GLMM for repeated measures in space and time series
 
Bárbara Baraibar Padró
 - [R-sig-ME] Confidence intervals
 
Ben Bolker
 - [R-sig-ME] Confidence interval for relative contribution of random effect variance
 
lorenz.gygax at agroscope.admin.ch
 - [R-sig-ME] Question about linear mixed model
 
Douglas Bates
 - [R-sig-ME] Multiple independent random effects
 
Mark Payne
 - [R-sig-ME] link function with glmer and inverse.gaussian family
 
Helios de Rosario
 - [R-sig-ME] Seeming discrepancy between summary and confint; was: Confidence interval for relative contribution of random effect variance
 
lorenz.gygax at agroscope.admin.ch
 - [R-sig-ME] MCMCglmm multi-variate response for animal model
 
Shana Caro
 - [R-sig-ME] SE and CI for ICC
 
Mohd Masood
 - [R-sig-ME] Obscure convergence warning in optwrap() - convergence code 3 from bobyqa
 
Michael Cone
 - [R-sig-ME] Problem with profile and glmer
 
Ken Beath
 - [R-sig-ME] Is there a way to include both time correlation term and spatial correlation term in single lme model?
 
Nirmala Liyanage
 - [R-sig-ME] Is there a way to include both time correlation term and spatial correlation term in a single lme model?
 
Nirmala Liyanage
 - [R-sig-ME] informative prior for one variance
 
Van Dongen Stefan
 - [R-sig-ME] distributions and correlations
 
Van Dongen Stefan
 - [R-sig-ME] predict.merMod
 
Ben Bolker
 - [R-sig-ME] glmer and model evaluation
 
Dusit Ngoprasert
 - [R-sig-ME] xyplot() method for profile objects: error from use of the scales argument
 
John Maindonald
 - [R-sig-ME] Course Lisbon: Introduction to Linear mixed effects models, GLMM and MCMC with R
 
Highland Statistics Ltd
 - [R-sig-ME] Distribution of deviance residuals
 
Roelof Coster
 - [R-sig-ME] Fwd: RE: [R] Help with lsmeans
 
Ben Bolker
 - [R-sig-ME] Subject-wise gradient and Hessian
 
Vahid Nassiri
 - [R-sig-ME] FW: methods for glmerMod object
 
Ben Bolker
 - [R-sig-ME] sums of squares and F values in anova
 
Alexandra Kuznetsova
 - [R-sig-ME] Confidence interval for sum of coefficients
 
Michael Cone
 - [R-sig-ME] How can I estimate deviance explained of a mixed gamm?
 
Jon Lopez
 - [R-sig-ME] individual Linear mixed models
 
Etn
 - [R-sig-ME] Fwd: [Lme4-authors] LME4 and Lmer model
 
Zhanyou Xu
 - [R-sig-ME] Course Halifax: Introduction to Linear mixed effects models, GLMM and MCMC with R
 
Highland Statistics Ltd
    
 
    
      Last message date: 
       Tue Sep 30 18:39:55 CEST 2014
    Archived on: Wed Oct  1 00:26:18 CEST 2014
    
   
     
     
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