January 2008 Archives by date

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Starting: Tue Jan 1 23:14:29 CET 2008
Ending: Thu Jan 31 23:02:58 CET 2008
Messages: 391

• [BioC] EBImage Problem   Ellul Jason
• [BioC] limma: decideTests   Gordon K Smyth
• [BioC] Illumina data problem   affy snp
• [BioC] Illumina data problem   Sean Davis
• [BioC] Illumina data problem   affy snp
• [BioC] Background correction -- was: Illumina data problem   Wolfgang Huber
• [BioC] Background correction -- was: Illumina data problem   affy snp
• [BioC] Low-level analysis of custom microarrays   Teresa Colombo
• [BioC] Reading the Affymetrix data as .txt data (from GEO)   Alex Tsoi
• [BioC] Reading the Affymetrix data as .txt data (from GEO)   Sean Davis
• [BioC] Help needed with configuration function from cellHTS2 package   Shripad Sinari
• [BioC] Help needed with configuration function from cellHTS2 package   Shripad Sinari
• [BioC] Limma: Trying to read in imagene files   Sally
• [BioC] Cluster stability estimation   Francois Pepin
• [BioC] Odd isolated problem with GOstats   Mark W Kimpel
• [BioC] Help needed with configuration function from cellHTS2 package   ligia at ebi.ac.uk
• [BioC] Help needed with configuration function from cellHTS2 package   Wolfgang Huber
• [BioC] Odd isolated problem with GOstats   Marc Carlson
• [BioC] error with biomaRt in mysql mode   Janet Young
• [BioC] Help needed with configuration function from cellHTS2 package   Shripad Sinari
• [BioC] Low-level analysis of custom microarrays   Martin Morgan
• [BioC] GOstats package - Graphical representation of enriched terms - Help needed   Srinivas Iyyer
• [BioC] GOstats package - Graphical representation of enriched terms - Help needed   Sean Davis
• [BioC] Adobe Photoshop CS3 Extended MAC/XP/Vista for 89, Retails @ 999 (You Save 909)   Eli Griffin
• [BioC] GOstats package - Graphical representation of enriched terms - Help needed   Srinivas Iyyer
• [BioC] Odd isolated problem with GOstats   Marc Carlson
• [BioC] GOstats package - Graphical representation of enriched terms - Help needed   Sean Davis
• [BioC] GOstats package - Graphical representation of enriched terms - Help needed   Srinivas Iyyer
• [BioC] Low-level analysis of custom microarrays   Wolfgang Huber
• [BioC] understanding GOstats p-value   Janet Young
• [BioC] Limma: Trying to read in imagene files   Gordon Smyth
• [BioC] Microsoft Office 2007 Enterprise for 79, Retails @ 899 (You Save 819)   Kevin Long
• [BioC] Odd isolated problem with GOstats   Mark W Kimpel
• [BioC] understanding GOstats p-value   James MacDonald
• [BioC] understanding GOstats p-value   James MacDonald
• [BioC] GOStats - HyperGTest - expert opinion needed about the approach selecting gene list   Srinivas Iyyer
• [BioC] Inf values using SAM (package=siggenes)   Holger Schwender
• [BioC] understanding GOstats p-value   Charles Berry
• [BioC] GOStats - HyperGTest - expert opinion needed about the approach selecting gene list   James W. MacDonald
• [BioC] To many differentially expressed genes produced by LIMMA and dye-effect question   Vladimir Krasikov
• [BioC] agilent bicolor   Marie-Paule Roth
• [BioC] agilent bicolor   Sean Davis
• [BioC] agilent bicolor   Naomi Altman
• [BioC] understanding GOstats p-value   Kevin R. Coombes
• [BioC] Nachricht uber eine radioaktive Kontamination in der Schweiz   Lawrence Madden
• [BioC] understanding GOstats p-value   Janet Young
• [BioC] test set validation in pdmclass package   JONG-MIN LEE
• [BioC] test set validation in pdmclass package   James W. MacDonald
• [BioC] Questions in GOvis.pdf - a GOStats vignette   Srinivas Iyyer
• [BioC] Questions in GOvis.pdf - a GOStats vignette   Martin Morgan
• [BioC] To many differentially expressed genes produced by LIMMA and dye-effect question   Vladimir Krasikov
• [BioC] Drill   Luann Lowry
• [BioC] Has anyone actually solved justgcRMA memory error?   JONG-MIN LEE
• [BioC] Aurelio   Aurelio Irvin
• [BioC] Has anyone actually solved justgcRMA memory error?   James W. MacDonald
• [BioC] Has anyone actually solved justgcRMA memory error?   Henrik Bengtsson
• [BioC] troubleshooting aCGH package   Anguraj Sadanandam
• [BioC] Opportunities in probabilistic modelling: post-doctoral fellowships in computational biology, Vienna   Dr. D. P. Kreil (Boku)
• [BioC] online drug pharmacy   Cory Morrison
• [BioC] hyperGTest html report   Sebastien Gerega
• [BioC] cursor position on image   Peter Hietz
• [BioC] cursor position on image   Oleg Sklyar
• [BioC] Updating Bioconductor with standard R tools: what repository?   Johannes Graumann
• [BioC] Updating Bioconductor with standard R tools: what repository?   Martin Morgan
• [BioC] understanding GOstats p-value&In-Reply-To=E759ADD5-DCF1-4F5C-B6D6-475031AF81CE at fhcrc.org   Chunyan Liu
• [BioC] hyperGTest html report   Seth Falcon
• [BioC] hyperGTest html report   James W. MacDonald
• [BioC] Does R code exist to read Axon Binary file (ABF) Format?   Earl F. Glynn
• [BioC] Course*** R/S-Plus Advanced Programming ****by XLSolutions Corp   sue at xlsolutions-corp.com
• [BioC] About beadarray normaliseIllumina() warning messages   Elliot Kleiman
• [BioC] About beadarray normaliseIllumina() warning messages   Johnstone, Alice
• [BioC] hyperGTest html report   Sebastien Gerega
• [BioC] About beadarray normaliseIllumina() warning messages   Elliot Kleiman
• [BioC] AnnBuilder to build annotation package for hs133phsentrezg   Tineke Casneuf
• [BioC] hyperGTest html report   James W. MacDonald
• [BioC] plotHist and plotDeg error   Jason Pear
• [BioC] plotHist and plotDeg error   James W. MacDonald
• [BioC] Best Online casino and free USD 999 just for joining   Rusty Wilkinson
• [BioC] AnnBuilder to build annotation package for hs133phsentrezg   Marc Carlson
• [BioC] plotHist and plotDeg error   Jason Pear
• [BioC] hyperGTest html report   Sebastien Gerega
• [BioC] Adobe Font Folio 11 MAC/XP/Vista for 189, Retails @ 2599 (You save 2409)   Holden Johnson
• [BioC] get crazy bonus!, join today   Marian Cisneros
• [BioC] remove legend and trend lines   Joshua Udall
• [BioC] AnnBuilder to build annotation package for hs133phsentrezg   Groot, Philip de
• [BioC] Mailing list is not functioning properly   Groot, Philip de
• [BioC] remove legend and trend lines   J.delasHeras at ed.ac.uk
• [BioC] nsFilter and GSEA   Paolo Innocenti
• [BioC] nsFilter and GSEA   Sean Davis
• [BioC] hyperGTest html report   James W. MacDonald
• [BioC] nsFilter and GSEA   Paolo Innocenti
• [BioC] nsFilter and GSEA   Paolo Innocenti
• [BioC] nsFilter and GSEA   alex lam (RI)
• [BioC] Mailing list is not functioning properly   Marc Carlson
• [BioC] nsFilter and GSEA   Robert Gentleman
• [BioC] Limma error reading genepix files - single versus double channel scanning?   alison waller
• [BioC] nsFilter and GSEA   Paolo Innocenti
• [BioC] nsFilter and GSEA   Robert Gentleman
• [BioC] Normalizing single channels within double channel array data   alison waller
• [BioC] Welcome Bonus of USD 999 for free, join today!   Allison Hoskins
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• [BioC] About beadarray normaliseIllumina() warning messages   Matt Ritchie
• [BioC] Maho gebumst..!   Melany Arnold
• [BioC] matching expression profiles   Lana Schaffer
• [BioC] matching expression profiles   David Ruau
• [BioC] Announcement: BioConductor Developer Workshop, Lausanne 2008   Darlene Goldstein
• [BioC] get crazy bonus!, join today   Chandra Randle
• [BioC] Hier ist, wo Joel geile Girls fand, die gerne plaudern und alles zeigen   Lydia
• [BioC] About beadarray normaliseIllumina() warning messages   Elliot Kleiman
• [BioC] Limited time only,USD 999 for free   Angie Mcqueen
• [BioC] Every new player registering will automatically receive $2 400 USD   Patti Mcgraw
• [BioC] Lumi package: control data for background correction   merja matilainen
• [BioC] Mailing list is not functioning properly   Groot, Philip de
• [BioC] OT: Question about affymetrix array analysis and cRNA amount.   IAIN GALLAGHER
• [BioC] OT: Question about affymetrix array analysis and cRNA amount.   Jeanette McClintick
• [BioC] pvclust - interpretation of AU and BP values   Ed Schwalbe
• [BioC] matching expression profiles   James W. MacDonald
• [BioC] matching expression profiles   Lana Schaffer
• [BioC] simpleaffy   Patrícia Luiza Nunes da Costa
• [BioC] Aut0desk 3D Studlo Max 9 for XP 149, Retail 6720 (save 6590)   Ninja Hernandez
• [BioC] Senior Bioinformatics Research Scientist Position at Garvan Institute, Australia   Jean Yee Hwa Yang
• [BioC] Empty featureData slot in beadsummary IlluminaExpressionSet object   Johnstone, Alice
• [BioC] Empty featureData slot in beadsummary IlluminaExpressionSet object   Matt Ritchie
• [BioC] GGtools snpScreen questions   Paul Leo
• [BioC] simpleaffy   Celine Carret
• [BioC] simpleaffy parametres, Bioconductor Digest, Vol 59, Issue 15   claire
• [BioC] DAT to CEL   BURCIN BEKTAS
• [BioC] DAT to CEL   Kevin R. Coombes
• [BioC] DAT to CEL   Henrik Bengtsson
• [BioC] Lumi package: control data for background correction   Pan Du
• [BioC] Director of Bioinformatics - position announcement   Jenny Drnevich
• [BioC] Empty featureData slot in beadsummary IlluminaExpressionSet object   Johnstone, Alice
• [BioC] Empty featureData slot in beadsummary IlluminaExpressionSet object   Matt Ritchie
• [BioC] Quantile Normalization on log ratio data (cDNA) from SOFT formatted- data give weired result   Alex Tsoi
• [BioC] matching expression profiles   Thomas Girke
• [BioC] silly question on how to get the expression value   James Anderson
• [BioC] silly question on how to get the expression value   Christos Hatzis
• [BioC] Analysis of Affy-data from amplified RNA   Rafael Irizarry
• [BioC] dif between toptable and topTable   Sebastien Gerega
• [BioC] dif between toptable and topTable   Mark Robinson
• [BioC] qPCR platform - the reference in real-time PCR   qPCR Platform - the reference in real-time PCR
• [BioC] BGX Output Help   Louisa A Rispoli/AS/EXP/UTIA
• [BioC] Post-doctoral position   Kellie J Archer/FS/VCU
• [BioC] graph showing the GO results   Ingrid H. G. Østensen
• [BioC] R "Mishkin Test"   Hans-Georg Panzirsch
• [BioC] simpleaffy parametres, Bioconductor Digest, Vol 59, Issue 15   Patrícia Luiza Nunes da Costa
• [BioC] BGX Output Help   Kasper Daniel Hansen
• [BioC] problems with marray and gpr files   Simo.rossi
• [BioC] exonmap RMA function   Jay an
• [BioC] problems with marray and gpr files   J.delasHeras at ed.ac.uk
• [BioC] Disorderly duplicate spots   Yannick Wurm
• [BioC] installing xtable   Leonardo Kenji Shikida
• [BioC] installing xtable   Joern Toedling
• [BioC] exonmap RMA function   James W. MacDonald
• [BioC] Normalizing single channels within double channel array data   Wolfgang Huber
• [BioC] Disorderly duplicate spots   James W. MacDonald
• [BioC] SECOND ANNOUNCEMENT: IV International Course on Microarray Data Analysis   Ana Conesa
• [BioC] Disorderly duplicate spots   Naomi Altman
• [BioC] Rat Nimblegen promoter dataset HOWTO   Dario Greco
• [BioC] Rat Nimblegen promoter dataset HOWTO   James W. MacDonald
• [BioC] Rat Nimblegen promoter dataset HOWTO   Joern Toedling
• [BioC] Rat Nimblegen promoter dataset HOWTO   Dario Greco
• [BioC] Rat Nimblegen promoter dataset HOWTO   Joern Toedling
• [BioC] installing xtable   Leonardo Kenji Shikida
• [BioC] installing xtable   Martin Morgan
• [BioC] Rat Nimblegen promoter dataset HOWTO   Tobias Straub
• [BioC] exonmap RMA function   Martin Morgan
• [BioC] Rat Nimblegen promoter dataset HOWTO   Straubhaar, Juerg
• [BioC] Wir suchen neue Kooperationspartnern oder Partner.   cemil baysal
• [BioC] exonmap RMA function   Jay an
• [BioC] exonmap RMA function   Kasper Daniel Hansen
• [BioC] exonmap RMA function   Jay an
• [BioC] Disorderly duplicate spots   Yannick Wurm
• [BioC] Disorderly duplicate spots   Patrícia Luiza Nunes da Costa
• [BioC] Patricia's simpleaffy question   alex lam (RI)
• [BioC] Question - AffylmGUI   Celine Carret
• [BioC] Patricia's simpleaffy question   Patrícia Luiza Nunes da Costa
• [BioC] normal/cancer expression datasets   Federico Abascal
• [BioC] Question - AffylmGUI   Marcos Pinho
• [BioC] normal/cancer expression datasets   Narendra Kaushik
• [BioC] normal/cancer expression datasets   J.delasHeras at ed.ac.uk
• [BioC] exonmap RMA function   Martin Morgan
• [BioC] webbioc error   Ron
• [BioC] Trying to create exprSet   Sally
• [BioC] subsetting a SNPfeatureSet object for snprma   Stacey Burrows
• [BioC] Trying to create exprSet   Martin Morgan
• [BioC] unable to find known entrezgene with biomaRt   Dick Beyer
• [BioC] unable to find known entrezgene with biomaRt   James W. MacDonald
• [BioC] Classification Society Annual Meeting June 5-7   William Shannon
• [BioC] unable to find known entrezgene with biomaRt   Dick Beyer
• [BioC] unable to find known entrezgene with biomaRt   Steffen Durinck
• [BioC] unable to find known entrezgene with biomaRt   James MacDonald
• [BioC] unable to find known entrezgene with biomaRt   Dick Beyer
• [BioC] unable to find known entrezgene with biomaRt   Dick Beyer
• [BioC] generating haralick texture measures.   Milton Cezar Ribeiro
• [BioC] Visualizing GOstats HyperGTest results   Srinivas Iyyer
• [BioC] webbioc error   Kasper Daniel Hansen
• [BioC] generating haralick texture measures.   Oleg Sklyar
• [BioC] mm8 to mm9 conversion   joseph
• [BioC] mm8 to mm9 conversion   Ido M. Tamir
• [BioC] exonmap RMA function   Jay an
• [BioC] exonmap RMA function   Crispin Miller
• [BioC] Off topic - JOB   Crispin Miller
• [BioC] Error in scan(file, what, nmax, sep, dec, quote, skip, nlines, na.strings,   Sally
• [BioC] MiPP   Julian Lee
• [BioC] exonmap RMA function   Yuan Jian
• [BioC] Error in scan(file, what, nmax, sep, dec, quote, skip, nlines, na.strings,   Henrik Bengtsson
• [BioC] Error in scan(file, what, nmax, sep, dec, quote, skip, nlines, na.strings,   Sally
• [BioC] Error in scan(file, what, nmax, sep, dec, quote, skip, nlines, na.strings,   Dr. Sanjay Bhatikar
• [BioC] Limma -Time series data   kuangqin
• [BioC] exonmap RMA function   Crispin Miller
• [BioC] Job offer: Microarray bioinformatician sought at the CRG - Barcelona   Lauro Sumoy Van Dyck
• [BioC] Using a weight for Illumina data? (limma)   Benno Puetz
• [BioC] exonmap RMA function   Yuan Jian
• [BioC] Visualizing GOstats HyperGTest results   James W. MacDonald
• [BioC] Limma -Time series data   James W. MacDonald
• [BioC] Limma -Time series data   kuangqin
• [BioC] bioconductor installation problem   jrwang
• [BioC] Limma -Time series data   James W. MacDonald
• [BioC] bioconductor installation problem   James W. MacDonald
• [BioC] exonmap RMA function   Crispin Miller
• [BioC] 2 conditions time series with different number of sample at each time point   greg lefebvre
• [BioC] 2 conditions time series with different number of sample at each time point   Naomi Altman
• [BioC] how to plot a consensus clustering in a PDF file?   Artur Veloso
• [BioC] how to plot a consensus clustering in a PDF file?   Martin Morgan
• [BioC] boxplots on summarized data   Dennis.Burian at faa.gov
• [BioC] how to plot a consensus clustering in a PDF file?   Artur Veloso
• [BioC] boxplots on summarized data   Jenny Drnevich
• [BioC] boxplots on summarized data   toedling at ebi.ac.uk
• [BioC] How to use the same node layout for a set of graph plots using graph and Rgraphviz?   Rand, Hugh
• [BioC] boxplots on summarized data   Dennis.Burian at faa.gov
• [BioC] Command history   Yuan Jian
• [BioC] Command history   Artur Veloso
• [BioC] Command history   Martin Morgan
• [BioC] readBeadSummaryData() in beadarray package   Daniel Pick
• [BioC] MBNI CDF   alex lam (RI)
• [BioC] EBImage error   Yuan Jian
• [BioC] MBNI CDF   James W. MacDonald
• [BioC] EBImage error   James W. MacDonald
• [BioC] EBImage error   Oleg Sklyar
• [BioC] Question - Merged Arrays and Averaging Method   J.Oosting at lumc.nl
• [BioC] Question - Merged Arrays and Averaging Method   Marcos Pinho
• [BioC] readBeadSummaryData() in beadarray package   Johnstone, Alice
• [BioC] Limma and Dye Flips   Sally
• [BioC] GOstats locked database   Janet Young
• [BioC] Limma Linear Models - cont.matrix   Sally
• [BioC] GOstats locked database   Janet Young
• [BioC] Limma, Multiple Factors in Design <- model.matrix, help in interpretation   haja kadarmideen
• [BioC] Incomplete array study   Jason Pear
• [BioC] Dilution   Yuan Jian
• [BioC] Dilution   Robert Gentleman
• [BioC] Dilution   Yuan Jian
• [BioC] Dilution   Kasper Daniel Hansen
• [BioC] Dilution   Kasper Daniel Hansen
• [BioC] Dilution   Robert Gentleman
• [BioC] Dilution   Yuan Jian
• [BioC] Dilution   Kasper Daniel Hansen
• [BioC] Dilution   Martin Morgan
• [BioC] RMA median polish to a matrix   Naira Naouar
• [BioC] Ward's linkage, agnes and hclust   nicolas servant
• [BioC] RMA median polish to a matrix   Naira Naouar
• [BioC] RMA median polish to a matrix   Ben Bolstad
• [BioC] Limma and Dye Flips   Claus-Dieter Mayer
• [BioC] Limma and Dye Flips   Jianping Jin
• [BioC] Lumi package - MA plots   Simone de Jong
• [BioC] Lumi package - MA plots   Martin Morgan
• [BioC] GOstats locked database   Janet Young
• [BioC] Survey for genetics labs: how do you store & manage your data?   Matthew Keller
• [BioC] affymetrix_expression data outfile_annotation   Sébastien Tourlet
• [BioC] About Affy TilingArray makePDpackage   joseph
• [BioC] Annotation of hgu133a2 chip from limma   Pengcheng Lu
• [BioC] probe level data with aroma.affymetrix   Yuan Jian
• [BioC] probe level data with aroma.affymetrix   Henrik Bengtsson
• [BioC] About Affy TilingArray makePDpackage   Feng Tian
• [BioC] About Affy TilingArray makePDpackage   Feng Tian
• [BioC] Microarray Data Analyst - Open Position   Yasmina.Bauer at Actelion.Com
• [BioC] Bioconductor Courses at Imperial College   North, Bernard V
• [BioC] RMA biomodality, distribution and transformation   Benjamin Otto
• [BioC] affymetrix_expression data outfile_annotation   James W. MacDonald
• [BioC] Annotation of hgu133a2 chip from limma   James W. MacDonald
• [BioC] Limma, Multiple Factors in Design <- model.matrix, help in interpretation   James W. MacDonald
• [BioC] Converting rgug4130a.db to a NetAffx format   Srinivas Iyyer
• [BioC] RMA biomodality, distribution and transformation   Claus-Dieter Mayer
• [BioC] Annotation of hgu133a2 chip from limma   Marc Carlson
• [BioC] Annotation of hgu133a2 chip from limma   Ron
• [BioC] Combining multiple GSE datasets   LUIS F MENEZES
• [BioC] Combining multiple GSE datasets   Christos Hatzis
• [BioC] cont.matrix error: Error in eval(expr, envir, enclos) : object "c96" not found   Sally
• [BioC] dumb question: using Biostrings (or something else) to translate DNA bases to amino acid codes   Paul Shannon
• [BioC] dumb question: using Biostrings (or something else) to translate DNA bases to amino acid codes   lamon at fhcrc.org
• [BioC] fontsize in Rgraphviz   Mark W Kimpel
• [BioC] dumb question: using Biostrings (or something else) to translate DNA bases to amino acid codes   Robert Gentleman
• [BioC] FDR/adj.Pvalues   Lana Schaffer
• [BioC] FDR/adj.Pvalues   Naomi Altman
• [BioC] cont.matrix error: Error in eval(expr, envir, enclos) : object "c96" not found   Martin Morgan
• [BioC] GO package   Salim Charaniya
• [BioC] GOstats locked database   Janet Young
• [BioC] FDR/adj.Pvalues   Lana Schaffer
• [BioC] FDR/adj.Pvalues   Naomi Altman
• [BioC] fontsize in Rgraphviz   Li Long
• [BioC] FDR/adj.Pvalues   Stefano Calza
• [BioC] Simple annotate question: difference in getSYMBOL and lookUp   merja matilainen
• [BioC] minimum expression level (Simpleaffy)   Patrícia Luiza Nunes da Costa
• [BioC] How to extract Hopach MSS value   Prateek Singh
• [BioC] justCRLMM vs crlmm   Christian.Stratowa at vie.boehringer-ingelheim.com
• [BioC] Robust Spline Normalization (lumi) - illumina data matrix   Sharon
• [BioC] Simple annotate question: difference in getSYMBOL and lookUp   James W. MacDonald
• [BioC] minimum expression level (Simpleaffy)   alex lam (RI)
• [BioC] VST advice (Illumina microarray)   Pan Du
• [BioC] minimum expression level (Simpleaffy)   Patrícia Luiza Nunes da Costa
• [BioC] Edge attributes in Rgraphviz   Srinivas Iyyer
• [BioC] dumb question: using Biostrings (or something else) to translate DNA bases to amino acid codes   Paul Shannon
• [BioC] Handling batch effects in DE analysis.   Sharon
• [BioC] GOstats locked database   Herve Pages
• [BioC] Robust Spline Normalization (lumi) - illumina data matrix   Henrik Bengtsson
• [BioC] possible to create graph from edge list file?   Gergely Zahoranszky
• [BioC] MiPP   Julian Lee
• [BioC] minimum expression level (Simpleaffy)   alex lam (RI)
• [BioC] sample size estimation in genome wide association studies / packages   phguardiol at aol.com
• [BioC] fontsize in Rgraphviz   Mark W Kimpel
• [BioC] sample size estimation in genome wide association studies / packages   Richard Pearson
• [BioC] ways to measure runs of homozygosity?   Matthew Keller
• [BioC] sample size estimation in genome wide association studies /packages   alex lam (RI)
• [BioC] How to use the same node layout for a set of graph plots using graph and Rgraphviz?   Robert Gentleman
• [BioC] Edge attributes in Rgraphviz   Robert Gentleman
• [BioC] GO package   Marc Carlson
• [BioC] Edge attributes in Rgraphviz   Srinivas Iyyer
• [BioC] Edge attributes in Rgraphviz   Robert Gentleman
• [BioC] sample size estimation in genome wide association studies / packages   pingzhao Hu
• [BioC] A couple VSN related questions   Leo J. LEE
• [BioC] How to extract Hopach MSS value   Vincent Carey 525-2265
• [BioC] of limma and superfluous arrays   Yannick Wurm
• [BioC] fontsize in Rgraphviz   Deepayan Sarkar
• [BioC] Creating base file for AnnBuilder   Deepa Rajamani
• [BioC] Robust Spline Normalization (lumi) - illumina data matrix   Pan Du
• [BioC] fontsize in Rgraphviz   Mark W Kimpel
• [BioC] fontsize in Rgraphviz   Deepayan Sarkar
• [BioC] Storey and Tibshirani FDR   Daniel Brewer
• [BioC] Storey and Tibshirani FDR   alex lam (RI)
• [BioC] sample size estimation in genome wide association studies / packages   alex lam (RI)
• [BioC] multi-experiment multi-chip summarization   Anna Lobley
• [BioC] multi-experiment multi-chip summarization   Henrik Bengtsson
• [BioC] Storey and Tibshirani FDR   Naira Naouar
• [BioC] sample size estimation in genome wide association studies / packages   pingzhao Hu
• [BioC] SAM siggenes number of permutations   olivier armant
• [BioC] SAM siggenes number of permutations   Stefano Calza
• [BioC] SAM siggenes number of permutations   Claus-Dieter Mayer
• [BioC] SAM siggenes number of permutations   James W. MacDonald
• [BioC] Increase accuracy of calculations   Daniel Brewer
• [BioC] fontsize in Rgraphviz   Mark W Kimpel
• [BioC] Tiling arrays & differential methylation   joseph
• [BioC] SAM siggenes number of permutations   Holger Schwender
• [BioC] Combining expressionSets from GEO   Francois Pepin
• [BioC] Increase accuracy of calculations   Vincent Carey 525-2265
• [BioC] SAM siggenes number of permutations   Holger Schwender
• [BioC] Combining expressionSets from GEO   Martin Morgan
• [BioC] SAM siggenes number of permutations   olivier armant
• [BioC] Combining expressionSets from GEO   Francois Pepin
• [BioC] getURL in annaffy fails when object length==1 (or how to cope with collapsed lists, arrays, etc?)   Ana Rodrigues
• [BioC] Combining expressionSets from GEO   Martin Morgan
• [BioC] getURL in annaffy fails when object length==1 (or how to cope with collapsed lists, arrays, etc?)   Kasper Daniel Hansen
• [BioC] getURL in annaffy fails when object length==1 (or how to cope with collapsed lists, arrays, etc?)   Florian Hahne
• [BioC] Combining expressionSets from GEO   Francois Pepin
• [BioC] Combining expressionSets from GEO   Martin Morgan
• [BioC] Combining expressionSets from GEO   Sean Davis
• [BioC] Combining expressionSets from GEO   Francois Pepin
• [BioC] PFAM family names   Daniel Gatti
• [BioC] How to use the same node layout for a set of graph plots using graph and Rgraphviz?   Rand, Hugh
• [BioC] PFAM family names   Marc Carlson
• [BioC] Creating base file for AnnBuilder   Marc Carlson
• [BioC] fontsize in Rgraphviz   Deepayan Sarkar
• [BioC] Combining expressionSets from GEO   Martin Morgan
• [BioC] of limma and superfluous arrays   Gordon Smyth
• [BioC] possible to create graph from edge list file?   Wolfgang Huber
• [BioC] A couple VSN related questions   Wolfgang Huber
• [BioC] fontsize in Rgraphviz   Mark W Kimpel
• [BioC] A couple VSN related questions   Leo J. LEE
• [BioC] Google Compliant Advertising Request   Bobby - Cylon
• [BioC] fontsize in Rgraphviz   Li Long
• [BioC] SAM siggenes number of permutations   Holger Schwender
• [BioC] SAM siggenes number of permutations   Claus-Dieter Mayer
• [BioC] SAM siggenes number of permutations   Holger Schwender
• [BioC] ABPkgBuilder trouble   Johan Lindberg
• [BioC] fontsize in Rgraphviz   Florian Hahne
• [BioC] error loading the Rgraphviz package   yan zhou
• [BioC] Expired Illumina expression chip - advice for use and experimental design   Johnstone, Alice
• [BioC] rowQ error   Dennis.Burian at faa.gov
• [BioC] error loading the Rgraphviz package   Kasper Daniel Hansen
• [BioC] rowQ error   Robert Gentleman

Last message date: Thu Jan 31 23:02:58 CET 2008
Archived on: Thu Jan 31 23:03:29 CET 2008

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