[BioC] Creating base file for AnnBuilder

Marc Carlson mcarlson at fhcrc.org
Wed Jan 30 22:56:08 CET 2008

Deepa Rajamani wrote:
> Hi,
> I am trying to build annotation package for custom array gnGNF1Ba. I need help with getting the base file for AnnBuilder package. How do I map affy probe IDs in this array to GenBank accession numbers.
> Thanks a million for any help.
> Deepa Rajamani
> ---------------------------------
> 	[[alternative HTML version deleted]]
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at stat.math.ethz.ch
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor

Hi Deepa,

I am afraid that I am a little unclear about what you are asking.  If
you mean that you need help getting the probes matched to an appropriate
ID (like GenBank or Entrez Gene) then I am at a little bit of a loss
since I need to know first what information you actually even have about
the probes on your chip.

It might be helpful if you read the posting guide which can be found here:


In particular, it would be very helpful to know very specifically what
you have tried and where you are stumped.  And it's also usually a good
idea to post what your R sessionInfo() information is.



More information about the Bioconductor mailing list