[BioC] PFAM family names
Daniel Gatti
dmgatti at email.unc.edu
Wed Jan 30 21:24:59 CET 2008
I'm trying to get text descriptions of PFAM family names from the PFAM
package. I've tried to run the example code from the pfamAC2PDB help.
> AC2DE <- pfamAC2DE()
> head(AC2DE)
$PF00244
[1] "14-3-3 protein"
> pfamAC2DE(ac=sample(names(AC2DE), 3))
Error in sample(names(AC2DE), 3) :
cannot take a sample larger than the population when 'replace = FALSE'
> length(AC2DE)
[1] 1
> names(AC2DE)
[1] "PF00244"
It seems that the list contains only one value. How do I get
descriptions for all of the PFAM families?
Thanks,
Dan Gatti
UNC-CH
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