[BioC] Question - AffylmGUI

Celine Carret ckc at sanger.ac.uk
Fri Jan 18 14:27:54 CET 2008

Dear Marcos, 
You should look at the limma manual. AffylmGUI uses limma in the bacground
Bets wishes

-----Original Message-----
From: bioconductor-bounces at stat.math.ethz.ch [mailto:bioconductor-bounces at stat.math.ethz.ch] On Behalf Of Marcos Pinho
Sent: 18 January 2008 14:01
To: bioconductor at stat.math.ethz.ch
Subject: [BioC] Question - AffylmGUI

When you get the "Table of Genes Ranked in order of Diferential Expression" you get several colums such as M, A, t, P.Value and B. Since I am a new user and do not have a strong statistic background, where can I find information regarding the interpretation of these values?

Any help would be greatly appreciated!

Marcos Pinho
Instituto Nacional de Câncer
Rio de Janeiro - Brasil
Tel: 55-21-3233-1426
email: mbpinho at inca.gov.br
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