February 2008 Archives by thread
Starting: Fri Feb 1 01:32:41 CET 2008
Ending: Fri Feb 29 20:53:40 CET 2008
Messages: 358
- [BioC] Regarding the use of eBayes
Gordon K Smyth
- [BioC] fontsize in Rgraphviz
Mark W Kimpel
- [BioC] fontsize in Rgraphviz
Mark W Kimpel
- [BioC] error loading the Rgraphviz package
Li Long
- [BioC] of limma and superfluous arrays
Yannick Wurm
- [BioC] ArrayTools
Clairac
- [BioC] Agilent miRNA one color platform analysis
Lauro Sumoy Van Dyck
- [BioC] Combine two data frames with different columns
Daniel Brewer
- [BioC] rowQ error
Dennis.Burian at faa.gov
- [BioC] beadarray / normaliseIllumina and logarithm
Simon Anders
- [BioC] Post-doctoral opportunity
Edwards.Stephen at epamail.epa.gov
- [BioC] problem with installing source package pd.genomewidesnp.6_0.3.5.tar.gzon Windows XP
Sergii Ivakhno
- [BioC] Control probe
alex lam (RI)
- [BioC] memory allocation problems
fabio.dezi at mail.polimi.it
- [BioC] Bioconductor training course, Boston March 5-6-7 2008
Vincent Carey 525-2265
- [BioC] asking help for lumi package ( Illumina quality control and VST )
Pan Du
- [BioC] dependence of log2-ratios on scanning sensitivity?
Kamila Naxerova
- [BioC] BIRD 08
Prof. Roland Wagner
- [BioC] Job Offer
Storistes de France
- [BioC] samr question
yoo hoo
- [BioC] A couple VSN related questions
Wolfgang Huber
- [BioC] "GOHyperGResult" is not a defined class
Paul Shannon
- [BioC] Help needed with CopyNumber analysis for Affymetrix 250K arrays
Christian.Stratowa at vie.boehringer-ingelheim.com
- [BioC] simpleaffy pairwise.comparison problem
IAIN GALLAGHER
- [BioC] handle of Dendrogram object
John Lande
- [BioC] understanding ACME
Ramon Diaz-Uriarte
- [BioC] Database of anesthesiologists and much more
lubricity
- [BioC] How to use the same node layout for a set of graph plots using graph and Rgraphviz?
Rand, Hugh
- [BioC] illumina normalisation using beadarray package
Yogi Sundaravadanam
- [BioC] CGHcall error
Daniel Rico
- [BioC] Setting up data in the same way as hapmap for use with SNPchip package
Rachael Preston
- [BioC] Different gcRMA results depending on platform and version
JONG-MIN LEE
- [BioC] exonmap, xmap and xmapbridge
Paul Hammer
- [BioC] [Fwd: Re: exonmap, xmap and xmapbridge]
Paul Hammer
- [BioC] Clustering question
Srinivas Iyyer
- [BioC] Help with Affy TilingArray makePDpackage
Owen Thomas
- [BioC] Help with Affy TilingArray makePDpackage
Owen Thomas
- [BioC] RMA bgcorrection question
Siobhan A. Braybrook
- [BioC] Help with Affy TilingArray makePDpackage
Owen Thomas
- [BioC] Help with Affy TilingArray makePDpackage
Ben Bolstad
- [BioC] spot-types color assignment in limma
Dana Sevak
- [BioC] oligo package, Affymetrix tiling arrays, how to read the data
Johannes Rainer
- [BioC] oligo package, Affymetrix tiling arrays, how to read the data
Johannes Rainer
- [BioC] Help needed with spot-types color assignment in limma
Dana Sevak
- [BioC] lumi package - error while performing VST
Yogi Sundaravadanam
- [BioC] Mean or median centering data
kumar s
- [BioC] oligo package, Affymetrix tiling arrays, how to read the data
Johannes Rainer
- [BioC] is it you? cara here
cara
- [BioC] boiomaRt 'getSequence' question
Glazko, Galina
- [BioC] boiomaRt 'getSequence' question
Steffen Durinck
- [BioC] !SPAM: Get any soft you need without delays.
Silvia Kirby
- [BioC] !SPAM: My or harsh
Rosanna W. Byrne
- [BioC] !SPAM: in insight
lazy
- [BioC] !SPAM: by former
part
- [BioC] target file and error message
Chintanu
- [BioC] oligo package, Affymetrix tiling arrays, how to read the data
Johannes Rainer
- [BioC] difference in RMA
Marco Fabbri
- [BioC] transferring AffyBatch object and 64 bit R
Donna Toleno
- [BioC] postdoc position available at FHCRC
Harlan Robins
- [BioC] Mapping Clone ID to GO terms
Tim Smith
- [BioC] problem using esApply
L L
- [BioC] handle clustering and replicated probes in Agilent 4x44K : "philosiphical" question?
Daniela Marconi
- [BioC] How to use the same node layout for a set of graph plots using graph and Rgraphviz?
Ariel Chernomoretz
- [BioC] asking help for combining two Illumina datasets with different IDs
Pan Du
- [BioC] error message
Chintanu
- [BioC] Mapping Clone ID to GO terms
Tim Smith
- [BioC] package maDB
Arunava Chakravartty
- [BioC] (GC)RMA estimates without summerization?
Hooiveld, Guido
- [BioC] difference in RMA
Williams, Alan
- [BioC] GeneticsBase readGenes not reading
Farrel Buchinsky
- [BioC] normalization of a data frame
joseph
- [BioC] jj sent you a friend request on Yaari...
jj
- [BioC] RMAPPER package
Johannes Rainer
- [BioC] package maDB and Illumina arrays
merja matilainen
- [BioC] affylmGUI packages
Marcos Pinho
- [BioC] Bioconductor Digest, Vol 60, Issue 12
Ross
- [BioC] Cox Model
Eleni Christodoulou
- [BioC] ReadAffy crashes R-devel on mac
Helen Zhou
- [BioC] annotation package and namespace
Georg Otto
- [BioC] set.seed() in gcrma
William T Barry
- [BioC] EBImage installation error
Klaus-Peter Pleissner
- [BioC] Trouble installing bioconductor packages on 64 bit R on OS X Leopard
Matthew Keller
- [BioC] A question about fontsize in Rgraphviz
QuYi
- [BioC] GO summary of a list of genes?
Ron
- [BioC] CpG islands
Daniela Marconi
- [BioC] Bioconductor/R on AIX?
Susan R. Atlas
- [BioC] We produce a new type of green building material----bamboo floor.
Ta <zyingying05 at 126.com>
- [BioC] error message
Christina Tigress
- [BioC] We have position available, apply now
enoch philip
- [BioC] normalize.quantil, different results, affy_1.14.1 and affy_1.16.0
Markus Schmidberger
- [BioC] BioConductor Developer Workshop Lausanne 2008 Info
Darlene Goldstein
- [BioC] Inter-individual variation - Limma.
Sharon
- [BioC] oneChannelGUI problem
Marco Fabbri
- [BioC] final notice, boston bioconductor training march 5-7
Vincent Carey 525-2265
- [BioC] oneChannelGUI problem
raffaele.calogero at unito.it
- [BioC] Self-self microarray data, how to process them
Ng Stanley
- [BioC] Linking oligo and SNPchip or VanillaICE together
Martijn Brugman
- [BioC] Beginner's questions to using limma package
Ng Stanley
- [BioC] A subset with aCGH package
Michela Ballardini
- [BioC] MolPAGE Training Workshop on Causal Inference - 19-21 May 2008
Brian Tom
- [BioC] Van't Veer paper on breast cancer
Eleni Christodoulou
- [BioC] GEOquery proble
John Lande
- [BioC] Factorial experiment: No degree of freedom in maanova
Marcelo Laia
- [BioC] GCRMA-induced correlations?
Jenny Drnevich
- [BioC] [Fwd: fold change calculation]
Paul Hammer
- [BioC] cellHTS2: help with ConfFile (convertWellCoordinates) function
dunicadj at tcd.ie
- [BioC] can you get end position information from org.Hs.eg
Andrew Yee
- [BioC] Problem using the %in% command
Paul Christoph Schröder
- [BioC] NEW New video Jessica Alba
benedikt noah
- [BioC] probeset level visualization with standard deviation...
Paul Hammer
- [BioC] affy-chp file format
Bernd Jagla
- [BioC] Lumi nuID NA
Simone de Jong
- [BioC] [SOLVED] Factorial experiment: No degree of freedom in maanova
Marcelo Laia
- [BioC] Restore lost mm probes in an altcdfenv?
Mike Mahowald
- [BioC] Twilight
Mahdi Osman
- [BioC] Problems making contrasts
Ingrid H. G. Østensen
- [BioC] About Lumi nuID NAs
Pan Du
- [BioC] maSigPro Problems in see.genes
Marcelo Laia
- [BioC] R and c#
Yuan Jian
- [BioC] need help with mixed effects model
Mark W Kimpel
- [BioC] How to get MSS value for individual clusters.
Prateek Singh
- [BioC] fdrame package example
Richardson, Patrick
- [BioC] need help with mixed effects model
Mark W Kimpel
- [BioC] About a problem with databases
JUAN MIGUEL MARIN DIAZARAQUE
- [BioC] RMA, d-chip and Plier for new chip type Human/Mouse/Rat Gene 1.0 ST Array
Fang, Hong*
- [BioC] PGSEA question
Johan Lindberg
- [BioC] Memory problem with 64bit R using PLASQ500k
Christian.Stratowa at vie.boehringer-ingelheim.com
- [BioC] Help needed with aroma.affymetrix package to extract copy-numbers
Christian.Stratowa at vie.boehringer-ingelheim.com
- [BioC] Is it possible to use RMA on Agilent Data
Srinivas Iyyer
- [BioC] Lumi: filtering and batch effects (combat)
Simone de Jong
- [BioC] Custom Array GC bins
Lana Schaffer
- [BioC] RMA, d-chip and Plier for new chip type Human/Mouse/Rat Gene
Fang, Hong*
- [BioC] Background analysis on
james perkins
- [BioC] JOB: Microarray Bioinformatics Specialist
Robert Castelo
- [BioC] BioConductor Developer Workshop Lausanne 2008 - waiting list started
Darlene Goldstein
- [BioC] Lumi: filtering and batch effects (combat)
Pan Du
- [BioC] Normalizing two different platforms
Yair Benita
- [BioC] probe file for custom array
Lana Schaffer
- [BioC] Illumina array quality checking and RegGrn values..
Johnstone, Alice
- [BioC] GeneSetCollection from GSEA
Paul Christoph Schröder
- [BioC] How to input three datasets into OrderedList package
Seungwoo Hwang
- [BioC] Your Online Access has been Suspended
NatWest Bank Plc.
- [BioC] Running Pumacomb on both cores of dual-core machine
Paul Geeleher
- [BioC] microarrays image analysis
Abhilash Venu
- [BioC] plier using reference set normalization
Roumyana Yordanova
- [BioC] Why NONE of any contrast is significant when overall F-test is significant? using "global" method in decideTests() from limma package
Guiyuan Lei
- [BioC] A friendly mention of LPE package
pingzhao Hu
- [BioC] gcrma with hgu133a and hgu133a2
Max Kauer
- [BioC] Question on MLinterfaces Package
qinghua xu
- [BioC] interaction effect (4x2)
Sebastien Gerega
- [BioC] How to perform annotation using refseq IDs and GO ?
Ng Stanley
- [BioC] Limma: merging two scans of two-color arrays and spot weights
Serge Eifes
- [BioC] Problem with setQCEnvironment
Melissa Morine
- [BioC] FW: Error using ABarray
Straubhaar, Juerg
- [BioC] pamr.cv function
Patricia Greninger
- [BioC] ExpressionSet class and problems with phenotype and metadata matrices
Sean MacEachern
- [BioC] How can I make genesets for sigpathway
Srinivas Iyyer
- [BioC] Help for readIllumina beadlevel error
Johnstone, Alice
- [BioC] bioc-sig-sequencing: new list for Bioconductor high-throughput sequencing analysis
Martin Morgan
- [BioC] Inconsistency in GOstats results after GO enrichment
Chanchal Kumar
- [BioC] position in translational bioinformatics
Wall, Dennis Paul
- [BioC] post-doc position at the FHCRC
Robert Gentleman
- [BioC] multtest MTP raw P values = 0
Timur Shtatland
- [BioC] extremely low adjusted p-values in regression using limma
Artur Veloso
Last message date:
Fri Feb 29 20:53:40 CET 2008
Archived on: Fri Feb 29 20:53:54 CET 2008
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