[BioC] oneChannelGUI problem

[raffaele.calogero at unito.it]

Hi Marco,
I run oneChannelGUI on a SUN server with SUSE Enterprise
10.0. On monday I will check for your problem.
Could please tell me which graphical output will produce
errors?
oneChannelGUI inherits all the graphical functions of
affylmGUI and , to reduce the RAM consumption
oneChannelGUI specific graphical functions are directed on
the R interface and they are not controlled by tcl/tk.
To understand where the bug is  located I need to
understand if it is a problem due to the inherited
affylmGUI graphics or oneChannelGUI specific.
Could you please try to load some 3'IVT affy .CEL files
using affylmGUI and let me know if you encounter the same
problem and on which kind of graphical output?
Cheers
Raffaele

Marco wrote:
>Dear all,
>I have installed oneChannelGUi on a suse machine and when
I try to
>produce any type of graph I got this error:
>
>error in
structure(.external("dotTcl",...,PACKAGE="tcltk"),class=tclObj):
>use of NULL environmnet is defunct)
>
>I attach info:
>
>sessionInfo()
>R version 2.6.2 (2008-02-08)
>i686-pc-linux-gnu
>
>locale:
>LC_CTYPE=en_US.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=en_US.UTF-8;LC_MONETARY=en_US.UTF-8;LC_MESSAGES=en_US.UTF-8;LC_PAPER=en_US.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATION=C
>
>attached base packages:
>[1] tcltk     tools     stats     graphics  grDevices
utils     datasets
>[8] methods   base
>
>other attached packages:
>[1] hgu133plus2cdf_2.0.0 tkrplot_0.0-9       
oneChannelGUI_1.4.4
>[4] tkWidgets_1.16.0     DynDoc_1.16.0       
widgetTools_1.14.0
>[7] affylmGUI_1.12.0     affy_1.12.2          affyio_1.0.0
>[10] limma_2.12.0         Biobase_1.16.3
>
>loaded via a namespace (and not attached):
>[1] rcompgen_0.1-17