February 2008 Archives by date

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Starting: Fri Feb 1 01:32:41 CET 2008
Ending: Fri Feb 29 20:53:40 CET 2008
Messages: 358

• [BioC] Regarding the use of eBayes   Gordon K Smyth
• [BioC] fontsize in Rgraphviz   Mark W Kimpel
• [BioC] fontsize in Rgraphviz   Mark W Kimpel
• [BioC] error loading the Rgraphviz package   Li Long
• [BioC] of limma and superfluous arrays   Yannick Wurm
• [BioC] ArrayTools   Clairac
• [BioC] Agilent miRNA one color platform analysis   Lauro Sumoy Van Dyck
• [BioC] ArrayTools   Sean Davis
• [BioC] Combine two data frames with different columns   Daniel Brewer
• [BioC] Combine two data frames with different columns   Sean Davis
• [BioC] rowQ error   Dennis.Burian at faa.gov
• [BioC] beadarray / normaliseIllumina and logarithm   Simon Anders
• [BioC] Post-doctoral opportunity   Edwards.Stephen at epamail.epa.gov
• [BioC] problem with installing source package pd.genomewidesnp.6_0.3.5.tar.gzon Windows XP   Sergii Ivakhno
• [BioC] problem with installing source package pd.genomewidesnp.6_0.3.5.tar.gzon Windows XP   James W. MacDonald
• [BioC] Control probe   alex lam (RI)
• [BioC] beadarray / normaliseIllumina and logarithm   Matt Ritchie
• [BioC] memory allocation problems   fabio.dezi at mail.polimi.it
• [BioC] Bioconductor training course, Boston March 5-6-7 2008   Vincent Carey 525-2265
• [BioC] asking help for lumi package ( Illumina quality control and VST )   Pan Du
• [BioC] Combine two data frames with different columns   lgautier at altern.org
• [BioC] dependence of log2-ratios on scanning sensitivity?   Kamila Naxerova
• [BioC] BIRD 08   Prof. Roland Wagner
• [BioC] Job Offer   Storistes de France
• [BioC] samr question   yoo hoo
• [BioC] A couple VSN related questions   Wolfgang Huber
• [BioC] dependence of log2-ratios on scanning sensitivity?   Wolfgang Huber
• [BioC] dependence of log2-ratios on scanning sensitivity?   Kamila Naxerova
• [BioC] fontsize in Rgraphviz   Florian Hahne
• [BioC] "GOHyperGResult" is not a defined class   Paul Shannon
• [BioC] "GOHyperGResult" is not a defined class   Tony Chiang
• [BioC] Help needed with CopyNumber analysis for Affymetrix 250K arrays   Christian.Stratowa at vie.boehringer-ingelheim.com
• [BioC] Agilent miRNA one color platform analysis   Francesco Favero
• [BioC] simpleaffy pairwise.comparison problem   IAIN GALLAGHER
• [BioC] handle of Dendrogram object   John Lande
• [BioC] Help needed with CopyNumber analysis for Affymetrix 250K arrays   Vincent Carey 525-2265
• [BioC] understanding ACME   Ramon Diaz-Uriarte
• [BioC] Database of anesthesiologists and much more   lubricity
• [BioC] understanding ACME   Sean Davis
• [BioC] How to use the same node layout for a set of graph plots using graph and Rgraphviz?   Rand, Hugh
• [BioC] Help needed with CopyNumber analysis for Affymetrix 250K arrays   Henrik Bengtsson
• [BioC] understanding ACME   Ramon Diaz-Uriarte
• [BioC] dependence of log2-ratios on scanning sensitivity?   Henrik Bengtsson
• [BioC] illumina normalisation using beadarray package   Yogi Sundaravadanam
• [BioC] Help needed with CopyNumber analysis for Affymetrix 250K arrays   Christian.Stratowa at vie.boehringer-ingelheim.com
• [BioC] Agilent miRNA one color platform analysis   Lauro Sumoy Van Dyck
• [BioC] CGHcall error   Daniel Rico
• [BioC] Setting up data in the same way as hapmap for use with SNPchip package   Rachael Preston
• [BioC] Help needed with CopyNumber analysis for Affymetrix 250K arrays   Christian.Stratowa at vie.boehringer-ingelheim.com
• [BioC] Help needed with CopyNumber analysis for Affymetrix 250K arrays   Henrik Bengtsson
• [BioC] CGHcall error   Henrik Bengtsson
• [BioC] Different gcRMA results depending on platform and version   JONG-MIN LEE
• [BioC] CGHcall error   Daniel Rico
• [BioC] exonmap, xmap and xmapbridge   Paul Hammer
• [BioC] exonmap, xmap and xmapbridge   Vincent Carey 525-2265
• [BioC] Different gcRMA results depending on platform and version   Sean Davis
• [BioC] "GOHyperGResult" is not a defined class   Paul Shannon
• [BioC] [Fwd: Re: exonmap, xmap and xmapbridge]   Paul Hammer
• [BioC] Clustering question   Srinivas Iyyer
• [BioC] Different gcRMA results depending on platform and version   Zhijin Wu
• [BioC] Help with Affy TilingArray makePDpackage   Owen Thomas
• [BioC] Help with Affy TilingArray makePDpackage   Owen Thomas
• [BioC] RMA bgcorrection question   Siobhan A. Braybrook
• [BioC] Help with Affy TilingArray makePDpackage   Owen Thomas
• [BioC] Help with Affy TilingArray makePDpackage   Ben Bolstad
• [BioC] RMA bgcorrection question   Ben Bolstad
• [BioC] Help with Affy TilingArray makePDpackage   Owen Thomas
• [BioC] spot-types color assignment in limma   Dana Sevak
• [BioC] oligo package, Affymetrix tiling arrays, how to read the data   Johannes Rainer
• [BioC] Help with Affy TilingArray makePDpackage   Kasper Daniel Hansen
• [BioC] oligo package, Affymetrix tiling arrays, how to read the data   Johannes Rainer
• [BioC] CGHcall error   Vosse, S.J.
• [BioC] exonmap, xmap and xmapbridge   Crispin Miller
• [BioC] Help needed with spot-types color assignment in limma   Dana Sevak
• [BioC] Different gcRMA results depending on platform and version   JONG-MIN LEE
• [BioC] exonmap mysql fehler   Paul Hammer
• [BioC] exonmap mysql fehler   Paul Hammer
• [BioC] exonmap mysql fehler   Stefan Gräf
• [BioC] lumi package - error while performing VST   Yogi Sundaravadanam
• [BioC] Mean or median centering data   kumar s
• [BioC] oligo package, Affymetrix tiling arrays, how to read the data   Johannes Rainer
• [BioC] lumi package - error while performing VST   Cei Abreu-Goodger
• [BioC] illumina normalisation using beadarray package   Matt Ritchie
• [BioC] is it you? cara here   cara
• [BioC] Agilent miRNA one color platform analysis   Lauro Sumoy Van Dyck
• [BioC] boiomaRt 'getSequence' question   Glazko, Galina
• [BioC] boiomaRt 'getSequence' question   Steffen Durinck
• [BioC] boiomaRt 'getSequence' question   Steffen Durinck
• [BioC] !SPAM: Get any soft you need without delays.   Silvia Kirby
• [BioC] !SPAM: My or harsh   Rosanna W. Byrne
• [BioC] !SPAM: in insight   lazy
• [BioC] !SPAM: by former   part
• [BioC] target file and error message   Chintanu
• [BioC] target file and error message   Wolfgang Huber
• [BioC] oligo package, Affymetrix tiling arrays, how to read the data   Johannes Rainer
• [BioC] difference in RMA   Marco Fabbri
• [BioC] transferring AffyBatch object and 64 bit R   Donna Toleno
• [BioC] postdoc position available at FHCRC   Harlan Robins
• [BioC] Mapping Clone ID to GO terms   Tim Smith
• [BioC] Mapping Clone ID to GO terms   Christos Hatzis
• [BioC] transferring AffyBatch object and 64 bit R   Joern Toedling
• [BioC] difference in RMA   James MacDonald
• [BioC] problem using esApply   L L
• [BioC] problem using esApply   Robert Gentleman
• [BioC] handle clustering and replicated probes in Agilent 4x44K : "philosiphical" question?   Daniela Marconi
• [BioC] handle clustering and replicated probes in Agilent 4x44K : "philosiphical" question?   Francois Pepin
• [BioC] difference in RMA   cstrato
• [BioC] difference in RMA   Marco Fabbri
• [BioC] How to use the same node layout for a set of graph plots using graph and Rgraphviz?   Ariel Chernomoretz
• [BioC] asking help for combining two Illumina datasets with different IDs   Pan Du
• [BioC] error message   Chintanu
• [BioC] error message   Robert Gentleman
• [BioC] spot-types color assignment in limma   J.delasHeras at ed.ac.uk
• [BioC] Mapping Clone ID to GO terms   Tim Smith
• [BioC] Mapping Clone ID to GO terms   Hooiveld, Guido
• [BioC] How to use the same node layout for a set of graph plots using graph and Rgraphviz?   Rand, Hugh
• [BioC] package maDB   Arunava Chakravartty
• [BioC] (GC)RMA estimates without summerization?   Hooiveld, Guido
• [BioC] difference in RMA   Williams, Alan
• [BioC] (GC)RMA estimates without summerization?   Hooiveld, Guido
• [BioC] (GC)RMA estimates without summerization?   James W. MacDonald
• [BioC] GeneticsBase readGenes not reading   Farrel Buchinsky
• [BioC] (GC)RMA estimates without summerization?   Ben Bolstad
• [BioC] normalization of a data frame   joseph
• [BioC] jj sent you a friend request on Yaari...   jj
• [BioC] GeneticsBase readGenes not reading   Wolfgang Huber
• [BioC] normalization of a data frame   Henrik Bengtsson
• [BioC] package maDB   Johannes Rainer
• [BioC] RMAPPER package   Johannes Rainer
• [BioC] RMAPPER package   Vincent Carey 525-2265
• [BioC] package maDB and Illumina arrays   merja matilainen
• [BioC] affylmGUI packages   Marcos Pinho
• [BioC] GeneticsBase readGenes not reading   James W. MacDonald
• [BioC] Bioconductor Digest, Vol 60, Issue 12   Ross
• [BioC] Cox Model   Eleni Christodoulou
• [BioC] Cox Model   A Gusnanto
• [BioC] Cox Model   Eleni Christodoulou
• [BioC] ReadAffy crashes R-devel on mac   Helen Zhou
• [BioC] ReadAffy crashes R-devel on mac   Ben Bolstad
• [BioC] Cox Model   Ramon Diaz-Uriarte
• [BioC] ReadAffy crashes R-devel on mac   Helen Zhou
• [BioC] Re : Cox Model   phguardiol at aol.com
• [BioC] Re : Cox Model   Eleni Christodoulou
• [BioC] annotation package and namespace   Georg Otto
• [BioC] ReadAffy crashes R-devel on mac   Martin Morgan
• [BioC] GeneticsBase readGenes not reading   Farrel Buchinsky
• [BioC] GeneticsBase readGenes not reading   Farrel Buchinsky
• [BioC] ReadAffy crashes R-devel on mac   Diego Diez
• [BioC] set.seed() in gcrma   William T Barry
• [BioC] set.seed() in gcrma   Henrik Bengtsson
• [BioC] EBImage installation error   Klaus-Peter Pleissner
• [BioC] set.seed() in gcrma   Zhijin Wu
• [BioC] set.seed() in gcrma   Henrik Bengtsson
• [BioC] set.seed() in gcrma   Kasper Daniel Hansen
• [BioC] Cox Model   Kasper Daniel Hansen
• [BioC] ReadAffy crashes R-devel on mac   Kasper Daniel Hansen
• [BioC] set.seed() in gcrma   Henrik Bengtsson
• [BioC] set.seed() in gcrma   Kasper Daniel Hansen
• [BioC] set.seed() in gcrma   Henrik Bengtsson
• [BioC] set.seed() in gcrma   Anderson, S. Keith
• [BioC] Trouble installing bioconductor packages on 64 bit R on OS X Leopard   Matthew Keller
• [BioC] ReadAffy crashes R-devel on mac   Helen Zhou
• [BioC] ReadAffy crashes R-devel on mac   Helen Zhou
• [BioC] [R-SIG-Mac] Trouble installing bioconductor packages on 64 bit R on OS X Leopard   Simon Urbanek
• [BioC] [R-SIG-Mac] Trouble installing bioconductor packages on 64 bit R on OS X Leopard   Patrick Aboyoun
• [BioC] [R-SIG-Mac] Trouble installing bioconductor packages on 64 bit R on OS X Leopard   Matthew Keller
• [BioC] annotation package and namespace   Martin Morgan
• [BioC] A question about fontsize in Rgraphviz   QuYi
• [BioC] Re : Cox Model   Adaikalavan Ramasamy
• [BioC] GO summary of a list of genes?   Ron
• [BioC] Re : Cox Model   Eleni Christodoulou
• [BioC] Re : Cox Model   J.J.Goeman at lumc.nl
• [BioC] CpG islands   Daniela Marconi
• [BioC] [R-SIG-Mac] Trouble installing bioconductor packages on 64 bit R on OS X Leopard   Max Kuhn
• [BioC] Bioconductor/R on AIX?   Susan R. Atlas
• [BioC] We produce a new type of green building material----bamboo floor.   Ta <zyingying05 at 126.com>
• [BioC] Bioconductor/R on AIX?   Mark W Kimpel
• [BioC] Bioconductor/R on AIX?   Kasper Daniel Hansen
• [BioC] error message   Christina Tigress
• [BioC] We have position available, apply now   enoch philip
• [BioC] set.seed() in gcrma   Pierre Neuvial
• [BioC] normalize.quantil, different results, affy_1.14.1 and affy_1.16.0   Markus Schmidberger
• [BioC] BioConductor Developer Workshop Lausanne 2008 Info   Darlene Goldstein
• [BioC] set.seed() in gcrma   Anderson, S. Keith
• [BioC] Inter-individual variation - Limma.   Sharon
• [BioC] oneChannelGUI problem   Marco Fabbri
• [BioC] Re : Cox Model   Eleni Christodoulou
• [BioC] normalize.quantil, different results, affy_1.14.1 and affy_1.16.0   Ben Bolstad
• [BioC] Re : Cox Model   Sean Davis
• [BioC] Re : Cox Model   Adaikalavan Ramasamy
• [BioC] set.seed() in gcrma   huber
• [BioC] final notice, boston bioconductor training march 5-7   Vincent Carey 525-2265
• [BioC] error message   Paquet, Agnes
• [BioC] error message   Christina Tigress
• [BioC] oneChannelGUI problem   raffaele.calogero at unito.it
• [BioC] Self-self microarray data, how to process them   Ng Stanley
• [BioC] Linking oligo and SNPchip or VanillaICE together   Martijn Brugman
• [BioC] Beginner's questions to using limma package   Ng Stanley
• [BioC] A subset with aCGH package   Michela Ballardini
• [BioC] GO summary of a list of genes?   Juan C Oliveros Collazos
• [BioC] set.seed() in gcrma   lgautier at altern.org
• [BioC] oneChannelGUI problem   Marco Fabbri
• [BioC] MolPAGE Training Workshop on Causal Inference - 19-21 May 2008   Brian Tom
• [BioC] GO summary of a list of genes?   Martin Morgan
• [BioC] oneChannelGUI problem   raffaele.calogero at unito.it
• [BioC] Van't Veer paper on breast cancer   Eleni Christodoulou
• [BioC] Van't Veer paper on breast cancer   Joern Toedling
• [BioC] GEOquery proble   John Lande
• [BioC] GEOquery proble   Sean Davis
• [BioC] Factorial experiment: No degree of freedom in maanova   Marcelo Laia
• [BioC] GCRMA-induced correlations?   Jenny Drnevich
• [BioC] [Fwd: fold change calculation]   Paul Hammer
• [BioC] GCRMA-induced correlations?   Zhijin Wu
• [BioC] GCRMA-induced correlations?   Richard Friedman
• [BioC] [Fwd: fold change calculation]   Richard Pearson
• [BioC] GCRMA-induced correlations?   Robert Gentleman
• [BioC] cellHTS2: help with ConfFile (convertWellCoordinates) function   dunicadj at tcd.ie
• [BioC] can you get end position information from org.Hs.eg   Andrew Yee
• [BioC] can you get end position information from org.Hs.eg   Martin Morgan
• [BioC] cellHTS2: help with ConfFile (convertWellCoordinates) function   Wolfgang Huber
• [BioC] can you get end position information from org.Hs.eg   Marc Carlson
• [BioC] cellHTS2: help with ConfFile (convertWellCoordinates) function   Florian Hahne
• [BioC] can you get end position information from org.Hs.eg   Andrew Yee
• [BioC] GEOquery proble   John Lande
• [BioC] GCRMA-induced correlations?   Pierre Neuvial
• [BioC] Problem using the %in% command   Paul Christoph Schröder
• [BioC] GCRMA-induced correlations?   Henrik Bengtsson
• [BioC] GCRMA-induced correlations?   Wolfgang Huber
• [BioC] NEW New video Jessica Alba   benedikt noah
• [BioC] Factorial experiment: No degree of freedom in maanova   Naomi Altman
• [BioC] can you get end position information from org.Hs.eg   Marc Carlson
• [BioC] GCRMA-induced correlations?   Henrik Bengtsson
• [BioC] Factorial experiment: No degree of freedom in maanova   Marcelo Laia
• [BioC] probeset level visualization with standard deviation...   Paul Hammer
• [BioC] Problem using the %in% command   Martin Morgan
• [BioC] Problem using the %in% command   Oleg Sklyar
• [BioC] Factorial experiment: No degree of freedom in maanova   Marcelo Laia
• [BioC] [SOLVED] Factorial experiment: No degree of freedom in maanova   Marcelo Laia
• [BioC] affy-chp file format   Bernd Jagla
• [BioC] Lumi nuID NA   Simone de Jong
• [BioC] Are any of you interested in designing general web-based tools for people who do not write codes?   Ron
• [BioC] probeset level visualization with standard deviation...   oliveros at cnb.uam.es
• [BioC] probeset level visualization with standard deviation...   Martin Morgan
• [BioC] [SOLVED] Factorial experiment: No degree of freedom in maanova   Marcelo Laia
• [BioC] Restore lost mm probes in an altcdfenv?   Mike Mahowald
• [BioC] affy-chp file format   Kasper Daniel Hansen
• [BioC] Restore lost mm probes in an altcdfenv?   lgautier at altern.org
• [BioC] Problem using the %in% command   Paul Christoph Schröder
• [BioC] Twilight   Mahdi Osman
• [BioC] Problems making contrasts   Ingrid H. G. Østensen
• [BioC] Problems making contrasts   James W. MacDonald
• [BioC] About Lumi nuID NAs   Pan Du
• [BioC] maSigPro Problems in see.genes   Marcelo Laia
• [BioC] Twilight   James W. MacDonald
• [BioC] R and c#   Yuan Jian
• [BioC] need help with mixed effects model   Mark W Kimpel
• [BioC] How to get MSS value for individual clusters.   Prateek Singh
• [BioC] R and c#   STKH (Steen Krogsgaard)
• [BioC] Problems making contrasts   Ingrid H. G. Østensen
• [BioC] maSigPro Problems in see.genes   Ana Conesa
• [BioC] Problems making contrasts   James W. MacDonald
• [BioC] fdrame package example   Richardson, Patrick
• [BioC] need help with mixed effects model   Mark W Kimpel
• [BioC] About a problem with databases   JUAN MIGUEL MARIN DIAZARAQUE
• [BioC] RMA, d-chip and Plier for new chip type Human/Mouse/Rat Gene 1.0 ST Array   Fang, Hong*
• [BioC] R and c#   Herve Pages
• [BioC] PGSEA question   Johan Lindberg
• [BioC] Memory problem with 64bit R using PLASQ500k   Christian.Stratowa at vie.boehringer-ingelheim.com
• [BioC] Help needed with aroma.affymetrix package to extract copy-numbers   Christian.Stratowa at vie.boehringer-ingelheim.com
• [BioC] Help needed with aroma.affymetrix package to extract copy-numbers   Henrik Bengtsson
• [BioC] Is it possible to use RMA on Agilent Data   Srinivas Iyyer
• [BioC] Is it possible to use RMA on Agilent Data   Francois Pepin
• [BioC] PGSEA question   Furge, Kyle
• [BioC] PGSEA question   Johan Lindberg
• [BioC] PGSEA question   Furge, Kyle
• [BioC] Lumi: filtering and batch effects (combat)   Simone de Jong
• [BioC] Custom Array GC bins   Lana Schaffer
• [BioC] RMA, d-chip and Plier for new chip type Human/Mouse/Rat Gene   Fang, Hong*
• [BioC] RMA, d-chip and Plier for new chip type Human/Mouse/Rat Gene   Henrik Bengtsson
• [BioC] Background analysis on   james perkins
• [BioC] JOB: Microarray Bioinformatics Specialist   Robert Castelo
• [BioC] Custom Array GC bins   Michal Okoniewski
• [BioC] RMA, d-chip and Plier for new chip type Human/Mouse/Rat Gene   Fang, Hong*
• [BioC] Biostatistician position at Yale   Aiping Lin
• [BioC] RMA, d-chip and Plier for new chip type Human/Mouse/Rat Gene   Henrik Bengtsson
• [BioC] BioConductor Developer Workshop Lausanne 2008 - waiting list started   Darlene Goldstein
• [BioC] Lumi: filtering and batch effects (combat)   Pan Du
• [BioC] Normalizing two different platforms   Yair Benita
• [BioC] probe file for custom array   Lana Schaffer
• [BioC] probe file for custom array   James MacDonald
• [BioC] Illumina array quality checking and RegGrn values..   Johnstone, Alice
• [BioC] Illumina array quality checking and RegGrn values..   Wei Shi
• [BioC] GeneSetCollection from GSEA   Paul Christoph Schröder
• [BioC] How to input three datasets into OrderedList package   Seungwoo Hwang
• [BioC] Your Online Access has been Suspended   NatWest Bank Plc.
• [BioC] How to input three datasets into OrderedList package   Sean Davis
• [BioC] GeneSetCollection from GSEA   Sean Davis
• [BioC] Running Pumacomb on both cores of dual-core machine   Paul Geeleher
• [BioC] Running Pumacomb on both cores of dual-core machine   Richard Pearson
• [BioC] microarrays image analysis   Abhilash Venu
• [BioC] microarrays image analysis   Oleg Sklyar
• [BioC] microarrays image analysis   Saroj Mohapatra
• [BioC] plier using reference set normalization   Roumyana Yordanova
• [BioC] Running Pumacomb on both cores of dual-core machine   Martin Morgan
• [BioC] Running Pumacomb on both cores of dual-core machine   Paul Geeleher
• [BioC] Why NONE of any contrast is significant when overall F-test is significant? using "global" method in decideTests() from limma package   Guiyuan Lei
• [BioC] GeneSetCollection from GSEA   Martin Morgan
• [BioC] GeneSetCollection from GSEA   Sean Davis
• [BioC] A friendly mention of LPE package   pingzhao Hu
• [BioC] Running Pumacomb on both cores of dual-core machine   Richard Pearson
• [BioC] gcrma with hgu133a and hgu133a2   Max Kauer
• [BioC] cellHTS2: help with ConfFile (convertWellCoordinates) function   Wolfgang Huber
• [BioC] Question on MLinterfaces Package   qinghua xu
• [BioC] Question on MLinterfaces Package   Sean Davis
• [BioC] interaction effect (4x2)   Sebastien Gerega
• [BioC] Running Pumacomb on both cores of dual-core machine   Atro Tossavainen
• [BioC] How to perform annotation using refseq IDs and GO ?   Ng Stanley
• [BioC] How to perform annotation using refseq IDs and GO ?   Georg Otto
• [BioC] Limma: merging two scans of two-color arrays and spot weights   Serge Eifes
• [BioC] Problem with setQCEnvironment   Melissa Morine
• [BioC] Running Pumacomb on both cores of dual-core machine   Paul Geeleher
• [BioC] Running Pumacomb on both cores of dual-core machine   Richard Pearson
• [BioC] Problem with setQCEnvironment   James W. MacDonald
• [BioC] How to perform annotation using refseq IDs and GO ?   James W. MacDonald
• [BioC] interaction effect (4x2)   James W. MacDonald
• [BioC] Why NONE of any contrast is significant when overall F-test is significant? using "global" method in decideTests() from limma package   James W. MacDonald
• [BioC] Why NONE of any contrast is significant when overall F-test is significant? using "global" method in decideTests() from limma package   Guiyuan Lei
• [BioC] Problem with setQCEnvironment   Melissa Morine
• [BioC] FW: Error using ABarray   Straubhaar, Juerg
• [BioC] pamr.cv function   Patricia Greninger
• [BioC] Running Pumacomb on both cores of dual-core machine   Richard Pearson
• [BioC] Running Pumacomb on both cores of dual-core machine   Paul Geeleher
• [BioC] ExpressionSet class and problems with phenotype and metadata matrices   Sean MacEachern
• [BioC] ExpressionSet class and problems with phenotype and metadata matrices   James W. MacDonald
• [BioC] gcrma with hgu133a and hgu133a2   James W. MacDonald
• [BioC] Problem with setQCEnvironment (solution)   Melissa Morine
• [BioC] Running Pumacomb on both cores of dual-core machine   Richard Pearson
• [BioC] ExpressionSet class and problems with phenotype and metadata matrices   Martin Morgan
• [BioC] interaction effect (4x2)   Sebastien Gerega
• [BioC] Normalizing two different platforms   Kasper Daniel Hansen
• [BioC] How can I make genesets for sigpathway   Srinivas Iyyer
• [BioC] probe file for custom array   Lana Schaffer
• [BioC] Help for readIllumina beadlevel error   Johnstone, Alice
• [BioC] bioc-sig-sequencing: new list for Bioconductor high-throughput sequencing analysis   Martin Morgan
• [BioC] Inconsistency in GOstats results after GO enrichment   Chanchal Kumar
• [BioC] probe file for custom array   James W. MacDonald
• [BioC] Inconsistency in GOstats results after GO enrichment   James W. MacDonald
• [BioC] Inconsistency in GOstats results after GO enrichment   Tony Chiang
• [BioC] interaction effect (4x2)   James W. MacDonald
• [BioC] How can I make genesets for sigpathway   James W. MacDonald
• [BioC] Help for readIllumina beadlevel error   Matt Ritchie
• [BioC] How can I make genesets for sigpathway   Srinivas Iyyer
• [BioC] position in translational bioinformatics   Wall, Dennis Paul
• [BioC] How can I make genesets for sigpathway   James W. MacDonald
• [BioC] probe file for custom array   Lana Schaffer
• [BioC] post-doc position at the FHCRC   Robert Gentleman
• [BioC] multtest MTP raw P values = 0   Timur Shtatland
• [BioC] extremely low adjusted p-values in regression using limma   Artur Veloso

Last message date: Fri Feb 29 20:53:40 CET 2008
Archived on: Fri Feb 29 20:53:54 CET 2008

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