[BioC] Bioconductor/R on AIX?
Susan R. Atlas
susie at sapphire.phys.unm.edu
Thu Feb 14 20:09:13 CET 2008
Hi,
Last year our systems group tried to install Bioconductor/R on an IBM
p5-570 machine (16 nodes, 256 GB shared RAM), running AIX 5.3. They
ran into all sorts of difficulties and finally gave up.
I am interested in trying again (and working with an IBM support
group if necessary), but before embarking on this odyssey I was
wondering if anyone on this list has ever successfully run
Bioconductor/R on a similar architecture/AIX OS? If so, is there any
kind of cribsheet or other underground documentation that we could
consult to get around any AIX peculiarities?
Given IBM's long-term interest in the Life Sciences, it seems hard to
believe that Bioconductor/R would not be supported on this platform, but
that is what we heard through the grapevine.
Thanks for any thoughts/help with this.
- Susan
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Susan R. Atlas
Research Associate Professor, Physics and Astronomy
Director, Cancer Research and Treatment Center Shared Resource for
Bioinformatics and Computational Biology
Department of Physics & Astronomy
MSC07 4220 p: 505.277.1509
1 University of New Mexico e: susie at sapphire.phys.unm.edu
Albuquerque, NM 87131-0001 n: www.phys.unm.edu/CompMaterials
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