February 2007 Archives by thread

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Starting: Thu Feb 1 00:35:58 CET 2007
Ending: Wed Feb 28 22:32:58 CET 2007
Messages: 366

• [BioC] [R] possible spam alert   Kimpel, Mark William
• [BioC] possible spam alert   Francois Pepin
• [BioC] Outlook does threading   Kimpel, Mark William
  • [BioC] Outlook does threading [Broadcast]   Liaw, Andy
    • [BioC] Outlook does threading [Broadcast]   Mark W Kimpel
• [BioC] duplicateCorrelation problem with modelMatrix   Sergio Barberan
• [BioC] [R] Outlook does threading   Kimpel, Mark William
• [BioC] dChip v li.wong() (Was: Re: warnings from li wong summary method in expresso)   Ben Bolstad
• [BioC] Illumina   Ingrid H. G. Østensen
• [BioC] 3D histograms   Georgia Chan
• [BioC] dChip v li.wong() (Was: Re: warnings from li wong summary method in expresso)   marco zucchelli
  • [BioC] dChip v li.wong() (Was: Re: warnings from li wong summary method in expresso)   lgautier at altern.org
• [BioC] Bioconductor Digest, Vol 47, Issue 29   Jenny Drnevich
• [BioC] Upcoming Course**** R/Splus Fundamentals and Programming Techniques**** In Washington DC, San Francisco and Princeton   Sue Turner
• [BioC] Looking for R package for Nimblegen expression data   Xinxia Peng
  • [BioC] Looking for R package for Nimblegen expression data   Todd Richmond
    • [BioC] Looking for R package for Nimblegen expression data   J.delasHeras at ed.ac.uk
      • [BioC] Looking for R package for Nimblegen expression data   Todd Richmond
      • [BioC] Looking for R package for Nimblegen expression data   Tech Support
• [BioC] Rgraphviz: Edge attributes not displaying   Jarrett Byrnes
  • [BioC] Rgraphviz: Edge attributes not displaying   Kasper Daniel Hansen
    • [BioC] Rgraphviz: Edge attributes not displaying   Li.Long at isb-sib.ch
      • [BioC] Rgraphviz: Edge attributes not displaying   Jarrett Byrnes
      • [BioC] Rgraphviz: Edge attributes not displaying   Kasper Daniel Hansen
      • [BioC] Rgraphviz: Edge attributes not displaying   Jarrett Byrnes
      • [BioC] Rgraphviz: Edge attributes not displaying   Jarrett Byrnes
      • [BioC] Rgraphviz: Edge attributes not displaying   Li.Long at isb-sib.ch
      • [BioC] Rgraphviz: Edge attributes not displaying   Jarrett Byrnes
      • [BioC] Rgraphviz: Edge attributes not displaying   Li.Long at isb-sib.ch
      • [BioC] Rgraphviz: Edge attributes not displaying   Jarrett Byrnes
      • [BioC] Rgraphviz: Edge attributes not displaying   Li.Long at isb-sib.ch
      • [BioC] Rgraphviz: Edge attributes not displaying   Kasper Daniel Hansen
      • [BioC] Rgraphviz: Edge attributes not displaying   Kasper Daniel Hansen
      • [BioC] Rgraphviz: Edge attributes not displaying   Kasper Daniel Hansen
      • [BioC] Rgraphviz: Edge attributes not displaying   Kasper Daniel Hansen
      • [BioC] Rgraphviz: Edge attributes not displaying   Li.Long at isb-sib.ch
      • [BioC] Rgraphviz: Edge attributes not displaying   Kasper Daniel Hansen
• [BioC] Mac os x graphviz-Rgraphviz problem   Gavai, Anand
• [BioC] Looking for R package for Nimblegen expression data   Xinxia Peng
• [BioC] Affymetrix data analysis   Tristan Coram
  • [BioC] Affymetrix data analysis   James W. MacDonald
    • [BioC] Affymetrix data analysis   Robert Gentleman
• [BioC] [R-SIG-Mac] Mac os x graphviz-Rgraphviz problem   Kasper Daniel Hansen
  • [BioC] [R-SIG-Mac] Mac os x graphviz-Rgraphviz problem   Li.Long at isb-sib.ch
• [BioC] Differences between Linux and Windows   Ingrid H. G. Østensen
  • [BioC] Differences between Linux and Windows   Wolfgang Huber
    • [BioC] Differences between Linux and Windows   Ingrid H. G. Østensen
      • [BioC] Differences between Linux and Windows   Wolfgang Huber
      • [BioC] affyio package usage   Alessandro Ferrantini
      • [BioC] affyio package usage   Seth Falcon
      • [BioC] Differences between Linux and Windows   Ingrid H. G. Østensen
• [BioC] Analysis with MBNI re-mapped (custom) CDF files   Richard Pearson
• [BioC] beadarray and BeadStudio v.2.3.41   Asta Laiho
  • [BioC] beadarray and BeadStudio v.2.3.41   Mark Dunning
• [BioC] OSX binary graphviz, binary Rgraphviz install problems   Bobby Prill
  • [BioC] OSX binary graphviz, binary Rgraphviz install problems   Seth Falcon
    • [BioC] OSX binary graphviz, binary Rgraphviz install problems   Kasper Daniel Hansen
• [BioC] Illumina   Nianhua Li
• [BioC] Rgraphviz on Fedora Core 6   Byron Wallace
• [BioC] rcor.test   Naomi Altman
  • [BioC] rcor.test   Damion Colin Nero
• [BioC] rcor.test   Naomi Altman
• [BioC] Fwd: Re: rcor.test   Naomi Altman
• [BioC] matchprobe   Qing Jing
  • [BioC] matchprobe   Wolfgang Huber
• [BioC] matchprobe   Wolfgang Huber
• [BioC] siggenes   Qing Jing
  • [BioC] siggenes   Holger Schwender
• [BioC] [R-SIG-Mac] Mac os x graphviz-Rgraphviz problem   Li.Long at isb-sib.ch
  • [BioC] [R-SIG-Mac] Mac os x graphviz-Rgraphviz problem   Anand Gavai
  • [BioC] [R-SIG-Mac] Mac os x graphviz-Rgraphviz problem   Seth Falcon
• [BioC] error with AffyQCReport   Mark W Kimpel
  • [BioC] error with AffyQCReport   Wolfgang Huber
    • [BioC] error with AffyQCReport   Mark W Kimpel
      • [BioC] [Bioc-devel] error with AffyQCReport   James W. MacDonald
      • [BioC] [Bioc-devel] error with AffyQCReport   Mark W Kimpel
• [BioC] aCGH problem   Ballardini Michela
• [BioC] Bayesian Bioinformatics Position in Cincinnati   Medvedovic, Mario (medvedm)
• [BioC] extract info   Bandyopadhyay, Somnath (Som)
  • [BioC] extract info   James W. MacDonald
    • [BioC] extract info   Jenny Drnevich
• [BioC] Intra variance Vs inter group variance: scared!   Emmanuel Levy
  • [BioC] Intra variance Vs inter group variance: scared!   James W. MacDonald
• [BioC] about ts.plot   yanju
  • [BioC] about ts.plot   James W. MacDonald
• [BioC] correlation between M values of replicate arrays   João Fadista
  • [BioC] correlation between M values of replicate arrays   Claus Mayer
    • [BioC] correlation between M values of replicate arrays   Wolfgang Huber
      • [BioC] correlation between M values of replicate arrays   João Fadista
• [BioC] Finding peaks on tiling arrays/ moving average?   J.delasHeras at ed.ac.uk
  • [BioC] Finding peaks on tiling arrays/ moving average?   Sean Davis
• [BioC] Intra variance Vs inter group variance: scared!   Emmanuel Levy
  • [BioC] Intra variance Vs inter group variance: scared!   Naomi Altman
    • [BioC] Intra variance Vs inter group variance: scared!   Emmanuel Levy
      • [BioC] Intra variance Vs inter group variance: scared!   Naomi Altman
• [BioC] AffyQCReport: "I'm sorry, I do not know about chip type" (celeganscdf)   Emmanuel Levy
  • [BioC] AffyQCReport: "I'm sorry, I do not know about chip type" (celeganscdf)   Seth Falcon
    • [BioC] AffyQCReport: "I'm sorry, I do not know about chip type" (celeganscdf)   Jenny Drnevich
  • [BioC] AffyQCReport: "I'm sorry, I do not know about chip type" (celeganscdf)   Xiwei Wu
• [BioC] Problem with limma2biomaRt and MBNI custom CDF   Ochsner, Scott A
  • [BioC] Problem with limma2biomaRt and MBNI custom CDF   James W. MacDonald
• [BioC] ftM2graphNEL unexpected error   Dan Bebber
  • [BioC] ftM2graphNEL unexpected error   Seth Falcon
  • [BioC] ftM2graphNEL unexpected error   Wolfgang Huber
    • [BioC] ftM2graphNEL unexpected error   Wolfgang Huber
  • [BioC] ftM2graphNEL unexpected error   Seth Falcon
• [BioC] Microarray / HT Biology Position in South Africa   Wolfgang Huber
• [BioC] 2 Courses: (1) R/Splus Advanced Programming - San Francisco - (2) Data Mining: Practical Tools and Techniques in R/Splus - Salt Lake City   Sue Turner
• [BioC] snapCGH - subscript out of bounds   João Fadista
  • [BioC] snapCGH - subscript out of bounds   J-C. Marioni
• [BioC] snapCGH - subscript out of bounds   João Fadista
• [BioC] Problem with ABarray package   Alison Ziesel
  • [BioC] Problem with ABarray package   James W. MacDonald
    • [BioC] Problem with ABarray package   Kasper Daniel Hansen
      • [BioC] Problem with ABarray package   Alison Ziesel
• [BioC] GEOquery and different GPL: handle of GSE   claudio.is at libero.it
  • [BioC] GEOquery and different GPL: handle of GSE   Sean Davis
• [BioC] How to analyze Affy data, CEL files not available   Bobby Prill
  • [BioC] How to analyze Affy data, CEL files not available   James W. MacDonald
    • [BioC] How to analyze Affy data, CEL files not available   Naomi Altman
• [BioC] how to use ontoCompare on local db.   Alessandro Bruselles
• [BioC] limma   Bandyopadhyay, Somnath (Som)
• [BioC] Problem with ABarray package   Yongming A Sun
• [BioC] GEOquery and different GPL: handle of GSE   claudio.is at libero.it
• [BioC] Statistical Analysis of Metabonomic and Proteomic Data - MOLPAGE Training WorkPackage Series   Brian Tom
• [BioC] bugfix in graph::ftM2graphNEL   Wolfgang Huber
• [BioC] Z-score   Benjamin Otto
  • [BioC] Z-score   William Shannon
    • [BioC] Z-score   Wolfgang Huber
      • [BioC] Z-score   Naomi Altman
• [BioC] Chromosomal positions: mapping from custom cdf file   Glazko, Galina
  • [BioC] Chromosomal positions: mapping from custom cdf file   Hassane, Duane
  • [BioC] Chromosomal positions: mapping from custom cdf file   James W. MacDonald
• [BioC] Limma - Design related problem: Unconnected design and time-treatment interaction estimation   Serge Eifes
  • [BioC] Limma - Design related problem: Unconnected design and time-treatment interaction estimation   Naomi Altman
• [BioC] SnapCGH problem   Daniel Brewer
  • [BioC] SnapCGH problem   Daniel Brewer
• [BioC] makePDpackage for tiling arrays   Jenny Drnevich
• [BioC] oligo on R 2.4.1?   drnevich at uiuc.edu
  • [BioC] oligo on R 2.4.1?   James W. MacDonald
  • [BioC] oligo on R 2.4.1?   Seth Falcon
• [BioC] oligo on R 2.4.1?   Xinxia Peng
• [BioC] [R] R in Industry - new SIG   Kuhn, Max
• [BioC] oligo on R 2.4.1?   drnevich at uiuc.edu
  • [BioC] oligo on R 2.4.1?   James W. MacDonald
  • [BioC] oligo on R 2.4.1?   Wolfgang Huber
    • [BioC] oligo on R 2.4.1?   Seth Falcon
• [BioC] oligo on R 2.4.1?   Jenny Drnevich
• [BioC] doing paired t-test amongst several groups   Milena Gongora
  • [BioC] doing paired t-test amongst several groups   James W. MacDonald
    • [BioC] doing paired t-test amongst several groups   Milena Gongora
      • [BioC] doing paired t-test amongst several groups   James W. MacDonald
      • [BioC] doing paired t-test amongst several groups   Milena Gongora
• [BioC] Memory limit (vector size) o linux 64bit   Ivan Porro
  • [BioC] Memory limit (vector size) o linux 64bit   James W. MacDonald
    • [BioC] Memory limit (vector size) o linux 64bit   Ivan Porro
• [BioC] cluster "non-diet", "diet" example   jia ding
• [BioC] can't load affycoretools because GOstats is broken. Can I load affycoretools without dependencies to use some functions?   Mark W Kimpel
  • [BioC] can't load affycoretools because GOstats is broken. Can I load affycoretools without dependencies to use some functions?   James W. MacDonald
• [BioC] ReadAffy question   Loren Engrav
  • [BioC] ReadAffy question   James W. MacDonald
• [BioC] can't load affycoretools because GOstats is broken. Can I load affycoretools without dependencies to use some functions?   Mark W Kimpel
  • [BioC] can't load affycoretools because GOstats is broken. Can I load affycoretools without dependencies to use some functions?   Robert Gentleman
• [BioC] nested model: lme, aov and LSMeans   shirley zhang
• [BioC] can't load affycoretools because GOstats is broken. Can I load affycoretools without dependencies to use some functions?   Mark W Kimpel
• [BioC] Why not protein ids for GO resp. GOstats?   Kai Schlamp
  • [BioC] Why not protein ids for GO resp. GOstats?   Robert Gentleman
• [BioC] can I use FDR correction with hyperGTest conditional GO method?   Mark W Kimpel
  • [BioC] can I use FDR correction with hyperGTest conditional GO method?   Robert Gentleman
    • [BioC] can I use FDR correction with hyperGTest conditional GO method?   Mark W Kimpel
  • [BioC] can I use FDR correction with hyperGTest conditional GO method?   Kevin R. Coombes
• [BioC] cluster a set of genes based on another set of genes   Marcelo Laia
  • [BioC] cluster a set of genes based on another set of genes   michael watson (IAH-C)
  • [BioC] cluster a set of genes based on another set of genes   Sean Davis
  • [BioC] cluster a set of genes based on another set of genes   Al Ivens
  • [BioC] cluster a set of genes based on another set of genes   William Shannon
• [BioC] AffyQCReport: "I'm sorry, I do not know about chip type" (celeganscdf)   Crispin Miller
• [BioC] Proper references for CRAN and Bioconductor   Alvord, Greg (DMS) [Contr]
  • [BioC] Proper references for CRAN and Bioconductor   James W. MacDonald
• [BioC] connect to HapMart with biomaRt   Steffen Durinck
• [BioC] beadarray - readBeadLevelData problems   Mark Dunning
• [BioC] Problem reading MOE 430 A 2.0 CEL file   Nayeem Quayum
  • [BioC] Problem reading MOE 430 A 2.0 CEL file   James W. MacDonald
  • [BioC] Problem reading MOE 430 A 2.0 CEL file   Robert Gentleman
• [BioC] plier error message   Karen Vranizan
  • [BioC] plier error message   James W. MacDonald
• [BioC] makeProbePackage() error custom array with only PM probes   Hans van Leeuwen
  • [BioC] makeProbePackage() error custom array with only PM probes   James W. MacDonald
• [BioC] pre-processing Agilent data to remove a bad sample   Stephen Rudd
  • [BioC] pre-processing Agilent data to remove a bad sample   Francois Pepin
• [BioC] merge two dataframes   Ghislaine Guigon
  • [BioC] merge two dataframes   Sean Davis
  • [BioC] merge two dataframes   alex lam (RI)
• [BioC] readBeadSummaryData error in beadarray   Mark Dunning
• [BioC] Extract M values from probes set to cluster   Marcelo Laia
  • [BioC] Extract M values from probes set to cluster   Sean Davis
    • [BioC] Extract M values from probes set to cluster   Marcelo Laia
      • [BioC] Extract M values from probes set to cluster   Sean Davis
      • [BioC] Extract M values from probes set to cluster   J.Oosting at lumc.nl
      • [BioC] Extract M values from probes set to cluster   Marcelo Laia
      • [BioC] Extract M values from probes set to cluster   Marcelo Laia
      • [BioC] Extract M values from probes set to cluster   J.Oosting at lumc.nl
• [BioC] accessing affybatch probe set name   Karin Lagesen
  • [BioC] accessing affybatch probe set name   Kasper Daniel Hansen
• [BioC] nested model: lme, aov and LSMeans   shirley zhang
  • [BioC] nested model: lme, aov and LSMeans   James W. MacDonald
• [BioC] beadarray - readBeadLevelData problems   Mark Dunning
• [BioC] normalization of a microarray like dataframe and removing missing data by % missing   ALAN SMITH
  • [BioC] normalization of a microarray like dataframe and removingmissing data by % missing   michael watson (IAH-C)
• [BioC] Combining data from scans at different intensities   John Fowler
• [BioC] Combining data from scans at different intensities   Henrik Bengtsson
  • [BioC] Combining data from scans at different intensities   John Fowler
    • [BioC] Combining data from scans at different intensities   Henrik Bengtsson
• [BioC] Open bioinformatics/genomics scientist position in translational science department at MedImmune, Inc.   yihong yao
• [BioC] limma lmFit error   Ben Nota
  • [BioC] limma lmFit error   J.delasHeras at ed.ac.uk
• [BioC] [Bioc] physical memory dump when using cellHTS 1.4   Wolfgang Huber
  • [BioC] [Bioc] physical memory dump when using cellHTS 1.4   Russell Grocock
• [BioC] Combining data from scans at different intensities   Gordon Smyth
• [BioC] Limma 2.9.10: "Amean" missing   Julien Gagneur
  • [BioC] Limma 2.9.10: "Amean" missing   J.delasHeras at ed.ac.uk
• [BioC] heatmap without column's dendrogram   Federico Abascal
  • [BioC] heatmap without column's dendrogram   Francois Pepin
• [BioC] Illumina - Beadarray - Limma   Nieves Velez de Mendizabal
  • [BioC] Illumina - Beadarray - Limma   Lynn Amon
    • [BioC] Illumina - Beadarray - Limma   Matt Ritchie
  • [BioC] Illumina - Beadarray - Limma   Sean Davis
• [BioC] globaltest Error when using subset data   Xia Han
  • [BioC] globaltest Error when using subset data   J.J.Goeman at lumc.nl
• [BioC] limma lmFit error   Gordon Smyth
• [BioC] Heatmap quick questions   Daniel Brewer
  • [BioC] Heatmap quick questions   James W. MacDonald
• [BioC] read.maimages broken (limma 2.9.10)?   Koen Bossers
• [BioC] Does Affy Exon array include mitochrondrial genes   Wang, Daqing
• [BioC] metadata for Affymetrix Poplar array   Dick Beyer
  • [BioC] metadata for Affymetrix Poplar array   James W. MacDonald
    • [BioC] metadata for Affymetrix Poplar array   Dick Beyer
• [BioC] read.maimages broken (limma 2.9.10)?   Gordon K Smyth
• [BioC] Retrieving Upstream Sequences With biomaRt   Peter Robinson
• [BioC] making a cdf file for expression analysis on a tiling array   Ivan Baxter
  • [BioC] making a cdf file for expression analysis on a tiling array   Sean Davis
• [BioC] Limma 2.9.10: "Amean" missing   Gordon Smyth
  • [BioC] Limma 2.9.10: "Amean" missing   Julien Gagneur
• [BioC] Illumina - Beadarray - Limma   Gordon Smyth
• [BioC] webbioc chicken   jane janes
  • [BioC] webbioc chicken   James W. MacDonald
    • [BioC] webbioc chicken   Nianhua Li
• [BioC] amigo links: gene ontology annotation for probes   Yvonne J.K. Edwards
• [BioC] affycoretools: group parameter   Ingrid H. G. Østensen
  • [BioC] affycoretools: group parameter   James W. MacDonald
    • [BioC] affycoretools: group parameter   Ingrid H. G. Østensen
      • [BioC] affycoretools: group parameter   James W. MacDonald
      • [BioC] affycoretools: group parameter   Henrik Bengtsson
• [BioC] ABPkgBuilder trouble   Johan Lindberg
  • [BioC] ABPkgBuilder trouble   Nianhua Li
• [BioC] classification of time series data   Piet van Remortel
  • [BioC] classification of time series data   Wolfgang Huber
  • [BioC] classification of time series data   Francois Pepin
• [BioC] libraries or commands to help with parsing or handling web based database queries   ALAN SMITH
  • [BioC] libraries or commands to help with parsing or handling web based database queries   Thomas Girke
    • [BioC] libraries or commands to help with parsing or handlingweb based database queries   Benjamin Otto
      • [BioC] libraries or commands to help with parsing or handlingweb based database queries   Sean Davis
• [BioC] Postdoc Position in Tuebingen   Wolfgang Huber
• [BioC] confirm design matrix for lmfit   mik mik
• [BioC] question about RefRMA (RefPlus)   James Anderson
  • [BioC] question about RefRMA (RefPlus)   Richard Friedman
    • [BioC] question about RefRMA (RefPlus)   shirley zhang
• [BioC] webbioc chicken   Colin A. Smith
• [BioC] microarray data and survival analysis   Dr_Gyorffy_Balazs
• [BioC] amigo links: gene ontology annotation for probes   Colin A. Smith
• [BioC] Retrieving Upstream Sequences With biomaRt   Stephen Henderson
  • [BioC] Retrieving Upstream Sequences With biomaRt   Peter Robinson
    • [BioC] Retrieving Upstream Sequences With biomaRt   Steffen Durinck
      • [BioC] Retrieving Upstream Sequences With biomaRt   Peter Robinson
• [BioC] Gene Database Files (eg gene2accession) complete?   Benjamin Otto
  • [BioC] Gene Database Files (eg gene2accession) complete?   Sean Davis
  • [BioC] Gene Database Files (eg gene2accession) complete?   Nianhua Li
    • [BioC] Gene Database Files (eg gene2accession) complete?   Benjamin Otto
• [BioC] ABPkgBuilder trouble   John Zhang
• [BioC] Gramene now available via biomaRt   Steffen Durinck
• [BioC] gap-statistic implementation   Mike Sherman
  • [BioC] gap-statistic implementation   Kevin R. Coombes
• [BioC] microarray data and survival analysis   Charles C. Berry
  • [BioC] microarray data and survival analysis   Ramon Diaz-Uriarte
    • [BioC] microarray data and survival analysis   William Shannon
• [BioC] Take out non duplicated spots   João Fadista
• [BioC] duplicateCorrelation with few arrays   Sergio Barberan
• [BioC] silly question about ROC curve   James Anderson
  • [BioC] silly question about ROC curve   James W. MacDonald
• [BioC] Course*** R/S+: Fundamentals and Programming Techniques - Princeton, March 1-2   Sue Turner
• [BioC] Undergraduate Student Project Summer 2007, at EBI: the synapse and the brain   Wolfgang Huber
• [BioC] Gene Ontology - Finding Significant terms   Edward Bolanger
  • [BioC] Gene Ontology - Finding Significant terms   Robert Gentleman
• [BioC] postdoctoral positions in Boston   Peter J Park
• [BioC] AnnBuilder and Diverse Mappings   Johannes Graumann
  • [BioC] AnnBuilder and Diverse Mappings   Sean Davis
  • [BioC] AnnBuilder and Diverse Mappings   Nianhua Li
  • [BioC] AnnBuilder and Diverse Mappings   Johannes Graumann
• [BioC] gcrma version differences   Karen Vranizan
  • [BioC] gcrma version differences   Zhijin (Jean) Wu
• [BioC] (no subject)   thama at imbb.forth.gr
• [BioC] question about the value retured by function ontoCompare()   Na, Ren
  • [BioC] question about the value retured by function ontoCompare()   Paquet, Agnes
    • [BioC] question about the value retured by function ontoCompare()   Na, Ren
• [BioC] duplicateCorrelation with few arrays   Gordon K Smyth
• [BioC] analysis of microRNA arrays   Glazko, Galina
• [BioC] metadata for Affymetrix Poplar array   Nianhua Li
• [BioC] Bootstrapping/Permutation on DNA sequences   siewchinn fong
• [BioC] AnnBuilder and Diverse Mappings   John Zhang
• [BioC] AnnBuilder and Diverse Mappings   John Zhang
  • [BioC] AnnBuilder and Diverse Mappings   Nianhua Li
• [BioC] OntoCompare Error   Johannes Graumann
  • [BioC] OntoCompare Error   Robert Gentleman
  • [BioC] OntoCompare Error   Paquet, Agnes
    • [BioC] OntoCompare Error   Johannes Graumann
      • [BioC] OntoCompare Error   Paquet, Agnes
• [BioC] metadata for Affymetrix Poplar array   Nianhua Li
• [BioC] weird problem with ReadAffy and makecdfenv'd CDF package   Tim
  • [BioC] weird problem with ReadAffy and makecdfenv'd CDF package   James W. MacDonald
• [BioC] SimpleAffy - problem with pairwise.comparison(), can't construct PairComp object   Peter Lambert
  • [BioC] SimpleAffy - problem with pairwise.comparison(), can't construct PairComp object   Crispin Miller
• [BioC] silly question about read.table   James Anderson
  • [BioC] silly question about read.table   Sean Davis
  • [BioC] silly question about read.table   J.delasHeras at ed.ac.uk
    • [BioC] silly question about read.table   Naomi Altman
• [BioC] help needed   Ozge Gursoy-Yuzugulu
  • [BioC] help needed   Sean Davis
• [BioC] Gene Ontology - HyperGTest : Finding Significant terms   Edward Bolanger
  • [BioC] Gene Ontology - HyperGTest : Finding Significant terms   Seth Falcon
    • [BioC] Gene Ontology - HyperGTest : Finding Significant terms   Edward Bolanger
• [BioC] Gene density plot with points underneath   Daniel Brewer
  • [BioC] Gene density plot with points underneath (bug injitter)   Marcus Davy
• [BioC] CGH HomHMM problem and how to debug   Daniel Brewer
  • [BioC] BUG: CGH HomHMM problem and how to debug   Daniel Brewer
    • [BioC] BUG: CGH HomHMM problem and how to debug   James W. MacDonald
      • [BioC] BUG: CGH HomHMM problem and how to debug   Daniel Brewer
      • [BioC] BUG: CGH HomHMM problem and how to debug   Seth Falcon
      • [BioC] BUG: CGH HomHMM problem and how to debug   James W. MacDonald
      • [BioC] BUG: CGH HomHMM problem and how to debug   Seth Falcon
• [BioC] Normalization in davidTiling demo   Julian Gehring
  • [BioC] Normalization in davidTiling demo   Wolfgang Huber
• [BioC] hyperGTest results I do not understand   ariel at df.uba.ar
  • [BioC] hyperGTest results I do not understand   Seth Falcon
    • [BioC] hyperGTest results I do not understand   ariel at df.uba.ar
      • [BioC] hyperGTest results I do not understand   Seth Falcon
      • [BioC] hyperGTest results I do not understand   ariel at df.uba.ar
• [BioC] yeastCC - Spellman dataset   Edward Bolanger
• [BioC] Affymetrix promoter arrays   Jenny Drnevich
• [BioC] What is a good method for analyzing differential expression from Illumina BeadStudio summary data?   Gordon Smyth
• [BioC] BioConductor Developer Workshop Lausanne Info   Darlene Goldstein
• [BioC] time series analysis   Ozge Gursoy-Yuzugulu
  • [BioC] time series analysis   James W. MacDonald
• [BioC] 2 Courses: (1) R/Splus Advanced Programming - San Francisco - (2) Data Mining: Practical Tools and Techniques in R/Splus - Salt Lake City   Sue Turner
• [BioC] silly question about writing own function   James Anderson
  • [BioC] silly question about writing own function   Sean Davis
  • [BioC] silly question about writing own function   James W. MacDonald
  • [BioC] silly question about writing own function   Ido M. Tamir
• [BioC] Ideal Mismatch value   Wang, Yonghong (NIH/NCI) [C]
  • [BioC] Ideal Mismatch value   James W. MacDonald
    • [BioC] Ideal Mismatch value   James W. MacDonald
• [BioC] RMA background adjustment for the Nimblegen array?   Khan, Sohail
  • [BioC] RMA background adjustment for the Nimblegen array?   Benilton Carvalho
  • [BioC] RMA background adjustment for the Nimblegen array?   Todd Richmond
• [BioC] PCA score plot   James Anderson
  • [BioC] PCA score plot   James W. MacDonald
• [BioC] Exclude probes that show sd above 0.1 between replicate values   João Fadista

Last message date: Wed Feb 28 22:32:58 CET 2007
Archived on: Wed Feb 28 22:34:08 CET 2007

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