[BioC] AnnBuilder and Diverse Mappings

Johannes Graumann johannes_graumann at web.de
Thu Feb 22 18:00:13 CET 2007


Hello,

I'm trying to build an annotation package for one of EBIs IPI data base
using AnnBuilder. I'm trying to pull in the GO annotation unsing the mixed
GenBank/RefSeq baseMapType, but the database is build from a very diverse
set of sources and a significant number of entries has neither GenBank nor
RefSeq IDs. The question to more advanced users is now: how would you
proceed in this case? Is there a way to pull in Info using different
baseMapTypes and than unify the outputs?

Please advise,

Joh



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