[BioC] Ideal Mismatch value

Wang, Yonghong (NIH/NCI) [C] wangyong at mail.nih.gov
Wed Feb 28 18:05:58 CET 2007


Hi, All:
As part of the suggestions from a reviewer of my submitted paper, I am
asked to provide the IM (Ideal Mismatch) values generated from MAS5 for
some probes of some probeset. I know BioConductor can provide both PM
and MM intensities for each individual probes, would someone please tell
me whether I can also get IM values (when applicable) from cel file by
using BioConductor? If we can, how?

Thanks a lot for your help.

Best regards

YH Wang



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