November 2008 Archives by date

• Messages sorted by: [ thread ] [ subject ] [ author ]
• More info on this list...

Starting: Sat Nov 1 00:12:13 CET 2008
Ending: Sun Nov 30 22:07:00 CET 2008
Messages: 452

• [BioC] some help for Limma Factorial design for two color data.   Adrian Johnson
• [BioC] How to plot microRNA chromosome location   Michael Lawrence
• [BioC] account balance   Lloyds TSB Bank
• [BioC] Limma Factorial design for two color data   Naomi Altman
• [BioC] BMP4 probe '1940386' missing in illuminaHumanv2BeadID.db (as compared to illuminaHumanv2ProbeID.db)   Julian Lee
• [BioC] Beadarray and illumina methylation arrays   Julian Lee
• [BioC] 10 cadeaux au choix chez Dessous Cheri   Clara de Dessous Chéri
• [BioC] Combining old Affy arrays for limma   James Perkins
• [BioC] Combining old Affy arrays for limma   Sean Davis
• [BioC] Can't load the arabidopsis.db annotation package created in AnnotationDbi   Groot, Philip de
• [BioC] Can't load the arabidopsis.db annotation package created in AnnotationDbi   Sean Davis
• [BioC] BMP4 probe '1940386' missing in illuminaHumanv2BeadID.db (as compared to illuminaHumanv2ProbeID.db)   Marc Carlson
• [BioC] BMP4 probe '1940386' missing in illuminaHumanv2BeadID.db (as compared to illuminaHumanv2ProbeID.db)   Lynn Amon
• [BioC] BMP4 probe '1940386' missing in illuminaHumanv2BeadID.db (as compared to illuminaHumanv2ProbeID.db)   Mark Dunning
• [BioC] BMP4 probe '1940386' missing in illuminaHumanv2BeadID.db (as compared to illuminaHumanv2ProbeID.db)   Marc Carlson
• [BioC] LogFC in Limma   Hai Lin
• [BioC] BMP4 probe '1940386' missing in illuminaHumanv2BeadID.db (as compared to illuminaHumanv2ProbeID.db)   Marc Carlson
• [BioC] Can't load the arabidopsis.db annotation package created in AnnotationDbi   Groot, Philip de
• [BioC] missing functions in affy package   Rachael Hageman
• [BioC] Can't load the arabidopsis.db annotation package created in AnnotationDbi   Marc Carlson
• [BioC] missing functions in affy package   James W. MacDonald
• [BioC] missing functions in affy package   Wolfgang Huber
• [BioC] missing functions in affy package   Rachael Hageman
• [BioC] missing functions in affy package   laurent
• [BioC] missing functions in affy package   Henrik Bengtsson
• [BioC] Help with 'annotation' in GOHyeprGParamsClass   Jason Myers
• [BioC] Help with 'annotation' in GOHyeprGParamsClass   Robert Gentleman
• [BioC] quality assessment and preprocessing for tiling array-based CGH data   Zhi-Qiang Ye
• [BioC] Discrepancy on results from gcrma function and justGCRMA   Jerry
• [BioC] Average Over Irregular Replicate Spots   Claus-Jürgen Scholz
• [BioC] MA.loess   r.kandimalla
• [BioC] BMP4 probe '1940386' missing in illuminaHumanv2BeadID.db (as compared to illuminaHumanv2ProbeID.db)   Julian Lee
• [BioC] MA.loess   Wolfgang Huber
• [BioC] converting MA to a text file   r.kandimalla
• [BioC] LPE error caused by gcRMA [Error in var.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]   Wolfgang Huber
• [BioC] limma - different parametrization and weights   Hans-Ulrich Klein
• [BioC] Lumi Error   John Lande
• [BioC] LPE error caused by gcRMA [Error in var.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]   charliew
• [BioC] AnnotationDbi- Problem loading new Arabdiopsis annotation package   Samuel Wuest
• [BioC] LPE error caused by gcRMA [Error invar.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]   Hooiveld, Guido
• [BioC] AnnotationDbi- Problem loading new Arabdiopsis annotationpackage   Samuel Wuest
• [BioC] Rgraphviz and graphviz for R 2.8.0 on Windows XP   Theresa Scharl
• [BioC] Lumi Error   Sean Davis
• [BioC] converting MA to a text file   Sean Davis
• [BioC] LPE error caused by gcRMA [Error invar.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]   Richard Pearson
• [BioC] Rgraphviz and graphviz for R 2.8.0 on Windows XP   Kjell Konis
• [BioC] Lumi Error   John Lande
• [BioC] Lumi Error   Sean Davis
• [BioC] quantile normalization with common standards   Ido M. Tamir
• [BioC] Rgraphviz and graphviz for R 2.8.0 on Windows XP   Theresa Scharl
• [BioC] PdInfobuilder: Preparing data from Affymetrix HuGene expression arrays   Mary Putt
• [BioC] LPE error caused by gcRMA [Error invar.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]   Wolfgang Huber
• [BioC] quantile normalization with common standards   Wolfgang Huber
• [BioC] applicability of tilingArray package   Michael Palumbo
• [BioC] LIMMA Sort problem   Wang, Jixin
• [BioC] applicability of tilingArray package   Wolfgang Huber
• [BioC] quantile normalization with common standards   laurent
• [BioC] LIMMA Sort problem   James W. MacDonald
• [BioC] MAplot (AffyPLM) using an AffyBatch object   Javier Pérez Florido
• [BioC] LIMMA Sort problem   Jenny Drnevich
• [BioC] about: analysis Agilent miRNA array   hailei.nus at gmail.com
• [BioC] about: analysis Agilent miRNA array   Sean Davis
• [BioC] about: analysis Agilent miRNA array   hailei.nus at gmail.com
• [BioC] Lumi Error   John Lande
• [BioC] LIMMA Sort problem   Wang, Jixin
• [BioC] LIMMA Sort problem   Wang, Jixin
• [BioC] pathway finding software   Yanqin Yang
• [BioC] PdInfobuilder: Preparing data from Affymetrix HuGene expression arrays   Mary Putt
• [BioC] Help with 'annotation' in GOHyeprGParamsClass   Jason Myers
• [BioC] PdInfobuilder: Preparing data from Affymetrix HuGene expression arrays   Sean Davis
• [BioC] Help with 'annotation' in GOHyeprGParamsClass   Robert Gentleman
• [BioC] PdInfobuilder: Preparing data from Affymetrix HuGene expression arrays   Sean Davis
• [BioC] Adjusted Expression Values using linear model   Nathan S. Watson-Haigh
• [BioC] LPE error caused by gcRMA [Error invar.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]   Loren Engrav
• [BioC] Help with 'annotation' in GOHyeprGParamsClass   Jason Myers
• [BioC] LPE error caused by gcRMA [Error invar.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]   laurent
• [BioC] LPE error caused by gcRMA [Error invar.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]   Richard Pearson
• [BioC] LPE error caused by gcRMA [Error invar.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]   charliew
• [BioC] LPE error caused by gcRMA [Error invar.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]   charliew
• [BioC] OFF TOPIC How did we control for or remove background hybridization to the vector backbone ?   Marcelo Laia
• [BioC] Adjusted Expression Values using linear model   James W. MacDonald
• [BioC] Lumi Error   Pan Du
• [BioC] Can't load the arabidopsis.db annotation package created in AnnotationDbi   Groot, Philip de
• [BioC] LPE error caused by gcRMA [Error invar.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]   Richard Pearson
• [BioC] How to plot microRNA chromosome location   Camper (Chih-Wei Liu)
• [BioC] How to plot microRNA chromosome location   Camper (Chih-Wei Liu)
• [BioC] How to plot microRNA chromosome location   laurent
• [BioC] How to plot microRNA chromosome location   Sean Davis
• [BioC] Updated Rgraphviz in BioC 2.3 (was Re: Rgraphviz and graphviz for R 2.8.0 on Windows XP)   Patrick Aboyoun
• [BioC] Prix cassés : -50% sur une sélection de Mobiles   Laure de Meilleurmobile
• [BioC] limma - different parametrization and weights   Gordon K Smyth
• [BioC] CDF issue   Mathe, Ewy (NIH/NCI) [F]
• [BioC] lumi ID mapping issues   Pan Du
• [BioC] CDF issue   laurent
• [BioC] 1 achete = 1 offert + frais de port offert   Clara de Dessous Chéri
• [BioC] CDF issue   Mark Robinson
• [BioC] KEGG pathway layout/rendering   Sim, Fraser
• [BioC] CDF issue   Mathe, Ewy (NIH/NCI) [F]
• [BioC] How to plot microRNA chromosome location   Michael Lawrence
• [BioC] Extracting genes within venn diagram   Celine Carret
• [BioC] Extracting genes within venn diagram   James W. MacDonald
• [BioC] How to definitely point to local mirror?   Renaud Gaujoux
• [BioC] annotation information about ecoli2   Minwook Kim
• [BioC] annotation information about ecoli2   James W. MacDonald
• [BioC] Extracting genes within venn diagram   Jenny Drnevich
• [BioC] Extracting genes within venn diagram   Celine Carret
• [BioC] CDF issue   Mathe, Ewy (NIH/NCI) [F]
• [BioC] Network install of packages   Anthony Mullen
• [BioC] FW: How to plot microRNA chromosome location   Dykema, Karl
• [BioC] Network install of packages   Sean Davis
• [BioC] How to include chromosomal location or GO-annotation data in supervised microarray analysis?   Rainer Tischler
• [BioC] How to include chromosomal location or GO-annotation data in supervised microarray analysis?   Sean Davis
• [BioC] How to include chromosomal location or GO-annotation data in supervised microarray analysis?   Wolfgang Huber
• [BioC] Network install of packages   Wolfgang Huber
• [BioC] Network install of packages   Henrik Bengtsson
• [BioC] Network install of packages   Anthony Mullen
• [BioC] Network install of packages   Sean Davis
• [BioC] How to definitely point to local mirror?   Herve Pages
• [BioC] how to put together 600 files from the 5.0 Affy SNPchip   Laura Rodriguez Murillo
• [BioC] annotation information about ecoli2   Marc Carlson
• [BioC] LPE error caused by gcRMA [Error invar.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]   Loren Engrav
• [BioC] issue of genome build versions when using biomaRt   Al Tango
• [BioC] LPE error caused by gcRMA [Error invar.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]   laurent
• [BioC] Network install of packages   Atro Tossavainen
• [BioC] issue of genome build versions when using biomaRt   Joern Toedling
• [BioC] annotation information about ecoli2   James W. MacDonald
• [BioC] issue of genome build versions when using biomaRt   James W. MacDonald
• [BioC] annotation information about ecoli2   Marc Carlson
• [BioC] how to put together 600 files from the 5.0 Affy SNPchip   Laura Rodriguez Murillo
• [BioC] tilingArray problems   Anjan Purkayastha
• [BioC] biomaRt get exon intron structure of a transcrit   Shi, Tao
• [BioC] issue of genome build versions when using biomaRt   Herve Pages
• [BioC] annotation information about ecoli2   Herve Pages
• [BioC] how to put together 600 files from the 5.0 Affy SNPchip   Laura Rodriguez Murillo
• [BioC] GEOQuery - MAS5 normalized data   Srinivas Iyyer
• [BioC] how to put together 600 files from the 5.0 Affy SNPchip   laurent
• [BioC] GEOQuery - MAS5 normalized data   Sean Davis
• [BioC] GEOQuery - MAS5 normalized data   Francois Pepin
• [BioC] tilingArray question   Anjan Purkayastha
• [BioC] applicability of tilingArray package   Michael Palumbo
• [BioC] GEOQuery - MAS5 normalized data   Srinivas Iyyer
• [BioC] biomaRt get exon intron structure of a transcrit   James W. MacDonald
• [BioC] GEOQuery - MAS5 normalized data   Sean Davis
• [BioC] LPE error caused by gcRMA [Error invar.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]   Loren Engrav
• [BioC] tilingArray question   Wolfgang Huber
• [BioC] how to put together 600 files from the 5.0 Affy SNPchip   Laura Rodriguez Murillo
• [BioC] applicability of tilingArray package   Wolfgang Huber
• [BioC] biomaRt get exon intron structure of a transcrit   Shi, Tao
• [BioC] how to put together 600 files from the 5.0 Affy SNPchip   [Ricardo Rodriguez] Your EPEC Network ICT Team
• [BioC] how to put together 600 files from the 5.0 Affy SNPchip   [Ricardo Rodriguez] Your EPEC Network ICT Team
• [BioC] LPE error caused by gcRMA [Error invar.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]   Loren Engrav
• [BioC] Problem with limma topTable   Chen, Zhuoxun
• [BioC] adding KEGG annotations with ABPkBuilder from E.coli   Marc Carlson
• [BioC] Help with 'annotation' in GOHyeprGParamsClass   Marc Carlson
• [BioC] LPE error caused by gcRMA [Error invar.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]   Kasper Daniel Hansen
• [BioC] browseGenome width question (rtracklayer)   Mark Robinson
• [BioC] Et pourquoi pas acheter son mobile sur Internet : 9 raisons   Laure de Meilleurmobile
• [BioC] how to put together 600 files from the 5.0 Affy SNPchip   laurent
• [BioC] quality assessment and preprocessing for tiling array-based CGH data   Sean Davis
• [BioC] GeneMesh: Microarray data to Cardiovascular System, Genetic Processes, Immune System Diseases and more...   Jani, Saurin D
• [BioC] Agilent G4112F with hgug4112a.db?   Philipp Pagel
• [BioC] browseGenome width question (rtracklayer)   Michael Lawrence
• [BioC] Help with 'annotation' in GOHyeprGParamsClass   Jason Myers
• [BioC] LPE error caused by gcRMA [Error invar.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]   Loren Engrav
• [BioC] quality assessment and preprocessing for tiling array-based CGH data   Zhi-Qiang Ye
• [BioC] Help with 'annotation' in GOHyeprGParamsClass   Robert Gentleman
• [BioC] Help with 'annotation' in GOHyeprGParamsClass   Jason Myers
• [BioC] Maanova & createdata   Loren Engrav
• [BioC] Maanova & createdata   Marcelo Laia
• [BioC] Maanova & createdata   Loren Engrav
• [BioC] Agilent G4112F with hgug4112a.db?   Francois Pepin
• [BioC] Problem with limma topTable   Gordon K Smyth
• [BioC] Agilent G4112F with hgug4112a.db?   Philipp Pagel
• [BioC] -60% + 1 pyjama offert chez Dessous Cheri   Clara de Dessous Chéri
• [BioC] CAMDA conference program announcement / early booking discount until 12 Nov!   Dr. D. P. Kreil (Boku)
• [BioC] Bioconductor and Microarray workshop?   Ted Morrow
• [BioC] BIOINFORMATICIAN position available in Italy   rcaloger
• [BioC] Oligo:read.xysfiles fails   Arvas Mikko
• [BioC] For lumi package users: Change the names of Illumina ID mapping packages   Pan Du
• [BioC] Analysis of differentially regulated genes   r.kandimalla
• [BioC] Re : Analysis of differentially regulated genes   phguardiol at aol.com
• [BioC] shuffle the sample names of an expressionSet   Al Tango
• [BioC] In need of platform clarification for 2-color SMD arrays   Ochsner, Scott A
• [BioC] Colourful way of visualising differential analysis results   Daniel Brewer
• [BioC] Colourful way of visualising differential analysis results   Yannick Wurm
• [BioC] Analysis of differentially regulated genes   Sean Davis
• [BioC] shuffle the sample names of an expressionSet   Martin Morgan
• [BioC] Help with 'annotation' in GOHyeprGParamsClass   mcarlson at fhcrc.org
• [BioC] Does old workspace work?   Loren Engrav
• [BioC] applicability of tilingArray package   Michael Palumbo
• [BioC] using GSEAlm with GO geneSetCollections   Mark Kimpel
• [BioC] Does old workspace work?   Kasper Daniel Hansen
• [BioC] using GSEAlm with GO geneSetCollections   Robert Gentleman
• [BioC] Oligo:read.xysfiles fails   Arvas Mikko
• [BioC] Colourful way of visualising differential analysis results   Daniel Brewer
• [BioC] Ringo install fails on R 2.8.0   Arvas Mikko
• [BioC] Ringo install fails on R 2.8.0   laurent
• [BioC] Ringo install fails on R 2.8.0   Arvas Mikko
• [BioC] What does this P value column measures in LIMMA Time series analysis   yemi yomi
• [BioC] What does this P value column measures in LIMMA Time series analysis   James W. MacDonald
• [BioC] What does the Pvalue column measures in LIMMA analysis   yemi yomi
• [BioC] function for translation of ORFs   Ana Conesa
• [BioC] using GSEAlm with GO geneSetCollections   Dykema, Karl
• [BioC] What does the Pvalue column measures in LIMMA analysis   James W. MacDonald
• [BioC] shuffle the sample names of an expressionSet   Al Tango
• [BioC] biomaRt get exon intron structure of a transcrit   steffen at stat.Berkeley.EDU
• [BioC] mget function - newbie question   Tim Smith
• [BioC] mget function - newbie question   Jenny Drnevich
• [BioC] PdInfobuilder: Preparing data from Affymetrix HuGene expression arrays   Mary Putt
• [BioC] function for translation of ORFs   Robert Gentleman
• [BioC] function for translation of ORFs   Thomas Girke
• [BioC] error with get(getOption("device")) in maanova with R 2.8.0   Rob Tempelman
• [BioC] Quantile normalization of MiRNA array data   Matthew Neville
• [BioC] LPE error caused by gcRMA [Error invar.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]   Zhijin Wu
• [BioC] function for translation of ORFs   hpages at fhcrc.org
• [BioC] Quantile normalization of MiRNA array data   Henrik Bengtsson
• [BioC] Problem about using functions in RCurl to download a zipped file   LiGang
• [BioC] Correcting for covariate (very unbalanced design)   Renaud Gaujoux
• [BioC] LPE error caused by gcRMA [Error invar.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]   Wolfgang Huber
• [BioC] error with get(getOption("device")) in maanova with R 2.8.0   Wolfgang Huber
• [BioC] Problem about using functions in RCurl to download a zipped file   Sean Davis
• [BioC] biological reps and dye-swaps and duplicate spots in a common reference design   sylvie pinloche
• [BioC] biological reps and dye-swaps and duplicate spots in a common reference design   Jenny Drnevich
• [BioC] biological reps and dye-swaps and duplicate spots in a common reference design   Jenny Drnevich
• [BioC] error with get(getOption("device")) in maanova with R 2.8.0   Wolfgang Huber
• [BioC] Détendu du mobile avec Virgin Mobile   Laure de Meilleurmobile
• [BioC] USAR2009 ***R/R-PLUS/S Conference Announcement & Call For Papers - Las Vegas, USA   sue at xlsolutions-corp.com
• [BioC] Allele specific summary   Chai, High Seng, Ph.D.
• [BioC] problem in read.table   Hui-Yi Chu
• [BioC] Mean Plots and Heat Maps for Chromosome Bands   McGee, Monnie
• [BioC] Problem about using functions in RCurl to download a zipped file   LiGang
• [BioC] biomaRt get exon intron structure of a transcrit   Shi, Tao
• [BioC] memory corruption in make.cdf.package() reading binary CDF with BioC 2.3   Don Maszle
• [BioC] Trouble Loading Rgraphviz in BioC 2.2 and 2.3   McGee, Monnie
• [BioC] Drawing gene structures   Daren Tan
• [BioC] Drawing gene structures   Sean Davis
• [BioC] Illumina arrays - combining two versions.   Lavinia Gordon
• [BioC] 'Error in shell.exec(url) : file name conversion problem' in rtracklayer package   LiGang
• [BioC] Grand destockage chez Dessous Cheri stock limité   Clara de Dessous Chéri
• [BioC] Postdoctoral scientist/programmer positions   Crispin Miller
• [BioC] memory corruption in make.cdf.package() reading binary CDF with BioC 2.3   Wolfgang Huber
• [BioC] Finding Genomic Orthologs with biomaRt   Gundala Viswanath
• [BioC] aggregate_summarizing expression values over entrez gene ids   Vanessa Vermeirssen
• [BioC] applying coxfilter after LIMMA   Adrian Johnson
• [BioC] aggregate_summarizing expression values over entrez gene ids   Wolfgang Huber
• [BioC] aggregate_summarizing expression values over entrez gene ids   James W. MacDonald
• [BioC] applying coxfilter after LIMMA   James W. MacDonald
• [BioC] results.summary does not recognize annotations   Peter Schjerling
• [BioC] results.summary does not recognize annotations   James W. MacDonald
• [BioC] results.summary does not recognize annotations   Jenny Drnevich
• [BioC] problem in beadsummary vignette from beadarray   Jenny Drnevich
• [BioC] question about 385K nimblegen microarray data analysis   Kan Huang
• [BioC] results.summary does not recognize annotations   anna freni sterrantino
• [BioC] question about 385K nimblegen microarray data analysis   Sean Davis
• [BioC] question about 385K nimblegen microarray data analysis   Sean Davis
• [BioC] Clone ID to Gene symbol mapping for Hs?   Tim Smith
• [BioC] Finding Genomic Orthologs with biomaRt   Robert Gentleman
• [BioC] Clone ID to Gene symbol mapping for Hs?   Sean Davis
• [BioC] problem in beadsummary vignette from beadarray   Matt Ritchie
• [BioC] Processing data from Illumina HumanCNV370-Quad chips   Steven McKinney
• [BioC] beadarray question   Fu Sheng
• [BioC] beadarray package question   Fu Sheng
• [BioC] Illumina arrays - combining two versions.   Pan Du
• [BioC] gene expression data followup   Adrian Johnson
• [BioC] Processing data from Illumina HumanCNV370-Quad chips   J.Oosting at lumc.nl
• [BioC] Noël à 1 euro, c'est parti !   Laure de Meilleurmobile
• [BioC] Howto Pass List in useDataset of biomaRt   Gundala Viswanath
• [BioC] gene expression data followup   James W. MacDonald
• [BioC] gene expression data followup   Sean Davis
• [BioC] Howto Pass List in useDataset of biomaRt   James W. MacDonald
• [BioC] applying coxfilter after LIMMA   James W. MacDonald
• [BioC] beadarray package question   Mark Dunning
• [BioC] biomaRt doesn't load RCurl automatically   Shi, Tao
• [BioC] Mas5, normalization method, error   Yisong Zhen
• [BioC] biomaRt doesn't load RCurl automatically   James W. MacDonald
• [BioC] help with defining batch slot in cellHTS2   Yan Zhou
• [BioC] biomaRt doesn't load RCurl automatically   Shi, Tao
• [BioC] Mas5, normalization method, error   Wolfgang Huber
• [BioC] beadarray package question   Fu Sheng
• [BioC] Does old workspace work?   Loren Engrav
• [BioC] Votre forfait mobile vous coûte trop cher   Laure de Meilleurmobile
• [BioC] Correct Filter Value for WormBase Gene in BioMart   Gundala Viswanath
• [BioC] Prix incroyables en vente privee chez Dessous Cheri   Clara de Dessous Chéri
• [BioC] Rgraphviz error under Windows   rcaloger
• [BioC] La totalité de votre commande REMBOURSEE chez Dessous Cheri   Clara de Dessous Chéri
• [BioC] (no subject)   Raffaele calogero
• [BioC] (no subject)   Martin Morgan
• [BioC] (no subject)   McGee, Monnie
• [BioC] (no subject)   James W. MacDonald
• [BioC] (no subject)   Martin Morgan
• [BioC] (no subject)   McGee, Monnie
• [BioC] (no subject)   Raffaele calogero
• [BioC] Howto Pass List in useDataset of biomaRt   steffen at stat.Berkeley.EDU
• [BioC] Finding Genomic Orthologs with biomaRt   steffen at stat.Berkeley.EDU
• [BioC] (no subject)   Patrick Aboyoun
• [BioC] clone id to chromosome position   Al Tango
• [BioC] Bug in topGO-package [topGO_1.10.0: GenTable-function]   Samuel Wuest
• [BioC] clone id to chromosome position   Sean Davis
• [BioC] Help to submission   Droit Arnaud
• [BioC] Help to submission   Richard Pearson
• [BioC] Symposium announcement   Guilherme J. M. Rosa
• [BioC] Bug in topGO-package [topGO_1.10.0: GenTable-function]   Adrian Alexa
• [BioC] Continued problems with pdInfoBuilder   Harry Mangalam
• [BioC] Continued problems with pdInfoBuilder   Sean Davis
• [BioC] Continued problems with pdInfoBuilder   Rob Dunne
• [BioC] multiple locations for probeset in hgu133plus2CHRLOC vs. UCSC PSL data   Bazeley, Peter
• [BioC] multiple locations for probeset in hgu133plus2CHRLOC vs. UCSC PSL data   Sean Davis
• [BioC] multiple locations for probeset in hgu133plus2CHRLOC vs. UCSC PSL data   Keith Satterley
• [BioC] Noël : tous vos cadeaux à 1 euro   Laure de Meilleurmobile
• [BioC] Help to submission   Vincent Carey
• [BioC] Continued problems with pdInfoBuilder (Matt Settles)   Matt Settles
• [BioC] biomaRt getFeature function   Paul Hammer
• [BioC] biomaRt getFeature function   Paul Hammer
• [BioC] biomaRt getFeature function   steffen at stat.Berkeley.EDU
• [BioC] multiple locations for probeset in hgu133plus2CHRLOC vs. UCSC PSL data   Marc Carlson
• [BioC] Out of date source code?   Li, Qinghong, ST. LOUIS, NRC St. Louis Petcare
• [BioC] layout cDNA in limma   Srinivas Iyyer
• [BioC] confused about J-G statistic of GSEAlm   Mark Kimpel
• [BioC] layout cDNA in limma   Sean Davis
• [BioC] confused about J-G statistic of GSEAlm   Robert Gentleman
• [BioC] Does the strand of a microarray probe matter?   Cei Abreu-Goodger
• [BioC] Can't load annotations with lumi   Steve Taylor
• [BioC] Talk & Poster Call - qPCR 2009 Event   qPCR 2009 Event
• [BioC] Contrast matrix in limma factorial design for two color data   Dejian Zhao
• [BioC] Illumina Methylation. Normalization and statistics   Michael Walter
• [BioC] Illumina Methylation. Normalization and statistics   Sean Davis
• [BioC] Error in plot.window(...) : need finite 'xlim' values   T Joshi
• [BioC] Error in plot.window(...) : need finite 'xlim' values   Sean Davis
• [BioC] Does the strand of a microarray probe matter?   Steve Lianoglou
• [BioC] plot solexa sequence data to genome browser   Paul Hammer
• [BioC] plot solexa sequence data to genome browser   Sean Davis
• [BioC] Does the strand of a microarray probe matter?   Maria Stalteri
• [BioC] confused about J-G statistic of GSEAlm   Mark Kimpel
• [BioC] ArrayExpress package error   Srinivas Iyyer
• [BioC] beadarray package question   Mark Dunning
• [BioC] Creating a model matrix for three age groups using two-colour arrays   Carthika Luxmanan
• [BioC] L'ensemble 3 pieces à 9,90€ Venez vite voir c'est une surprise   Clara de Dessous Chéri
• [BioC] Hello Sir/ Madam, a help needed   John Antonydas Gaspar
• [BioC] Does the strand of a microarray probe matter?   Nick Henriquez
• [BioC] Illumina Methylation. Normalization and statistics   Michael Walter
• [BioC] Can't load annotations with lumi   Kristen K Dang
• [BioC] Illumina Methylation. Normalization and statistics   Ed Schwalbe
• [BioC] ArrayExpress package error   Audrey Kauffmann
• [BioC] Illumina Methylation. Normalization and statistics   Sean Davis
• [BioC] Hello Sir/ Madam, a help needed   Sean Davis
• [BioC] Illumina Methylation. Normalization and statistics   Mark Dunning
• [BioC] Hello Sir/ Madam, a help needed   Naomi Altman
• [BioC] Can't load annotations with lumi   Pan Du
• [BioC] Does the strand of a microarray probe matter?   Charles Danko
• [BioC] multiple locations for probeset in hgu133plus2CHRLOC vs. UCSC PSL data   Hervé Pagès
• [BioC] Does the strand of a microarray probe matter?   Cei Abreu-Goodger
• [BioC] Course material for "Using Bioconductor for ChIP-seq experiments"   Patrick Aboyoun
• [BioC] [Bioc-sig-seq] Alignments timings   Werner Van Belle
• [BioC] Creating a model matrix for three age groups using two-colour arrays   Gordon K Smyth
• [BioC] multiple locations for probeset in hgu133plus2CHRLOC vs. UCSC PSL data   Sean Davis
• [BioC] Does the strand of a microarray probe matter?   Sean Davis
• [BioC] Does the strand of a microarray probe matter?   Maria Stalteri
• [BioC] question regarding BSGenome/Biostrings   Elizabeth Purdom
• [BioC] question regarding BSGenome/Biostrings   Hervé Pagès
• [BioC] Does the strand of a microarray probe matter?   Nick Henriquez
• [BioC] hyperGTest on KEGG and PFAM with org.XX.eg annotations   James F. Reid
• [BioC] biomaRt error   Sonia SHAH
• [BioC] Genes and their associated GO terms and pathways   Daren Tan
• [BioC] Using wildcard with BiomaRt:getBM   Daren Tan
• [BioC] Genes and their associated GO terms and pathways   Sean Davis
• [BioC] Genes and their associated GO terms and pathways   Jani, Saurin D
• [BioC] Defining and handling replicates   Garge, Nikhil
• [BioC] [Bioc-sig-seq] Alignments timings   Hervé Pagès
• [BioC] [Bioc-sig-seq] Alignments timings   James W. MacDonald
• [BioC] [Bioc-sig-seq] Alignments timings   Sean Davis
• [BioC] limma design question   Adrian Johnson
• [BioC] Incroyable, 50 euros offerts par meilleurmobile   Noel Meilleurmobile
• [BioC] biomaRt error   Mark Robinson
• [BioC] GSM gene expression file and data analysis   Amin Momin
• [BioC] GSEABase   John Lande
• [BioC] GSEABase   Martin Morgan
• [BioC] GSEA   Loren Engrav
• [BioC] GSEA   Martin Morgan
• [BioC] GSM gene expression file and data analysis   Sean Davis
• [BioC] Does the strand of a microarray probe matter?   Kasper Daniel Hansen
• [BioC] Using GenomeGraphs effectively for generating publication quality pictures   Daren Tan
• [BioC] GSEA ???   Loren Engrav
• [BioC] C'est noel pour les professionnels   Noel Meilleurmobile
• [BioC] alternative splicing on human exon array   dorothyc
• [BioC] Human Gene 1.0ST v1 package   dorothyc
• [BioC] Download numbers   Hervé Pagès
• [BioC] Analysis of microarray data from diffrent studies   Amin Momin
• [BioC] Processing data from Illumina HumanCNV370-Quad chips   Steven McKinney
• [BioC] Download numbers   Diego Diez
• [BioC] Human Gene 1.0ST v1 package   Mark Robinson
• [BioC] Postdoctoral Bioinformatics position available at the Leiden University Medical Centre   J.Oosting at lumc.nl
• [BioC] alternative splicing on human exon array   Mark Robinson
• [BioC] Human Gene 1.0ST v1 package   amit mandal
• [BioC] Analysis of microarray data from diffrent studies   Sean Davis
• [BioC] limma design question   James W. MacDonald
• [BioC] Human Gene 1.0ST v1 package   Marc Carlson
• [BioC] exclude spots with zero weight 0 from lmfit toptable list in limmaGUI   Christine Voellenkle
• [BioC] Download numbers   Hervé Pagès
• [BioC] limma design question   Jenny Drnevich
• [BioC] limma design question   James W. MacDonald
• [BioC] Postdoctoral position in Bioinformatics/Computational Biology   Wei Li
• [BioC] Using GenomeGraphs effectively for generating publication quality pictures   steffen at stat.Berkeley.EDU
• [BioC] Using wildcard with BiomaRt:getBM   steffen at stat.Berkeley.EDU
• [BioC] Using GenomeGraphs effectively for generating publication quality pictures   Daren Tan
• [BioC] Limma: how to get same output as topTable but for all the genes ?   Daren Tan
• [BioC] Using wildcard with BiomaRt:getBM   Daren Tan
• [BioC] Limma: how to get same output as topTable but for all the genes ?   Daren Tan
• [BioC] Creating a new instance of oligoSnpSet   Steven McKinney
• [BioC] problems with paired design in limma   Michael Walter
• [BioC] problems with paired design in limma   James W. MacDonald
• [BioC] Limma: how to get same output as topTable but for all the genes ?   Jenny Drnevich
• [BioC] problems with paired design in limma   Michael Walter
• [BioC] problems with paired design in limma   James W. MacDonald
• [BioC] human exon array 1.0ST, exonmap, exon.pmcdf troubles   Tobias Straub
• [BioC] To biomaRt users of Ensembl BioMart archives.   steffen at stat.Berkeley.EDU
• [BioC] Creating a new instance of oligoSnpSet   Steven McKinney
• [BioC] Creating a new instance of oligoSnpSet   Martin Morgan
• [BioC] Creating a new instance of oligoSnpSet   Steven McKinney
• [BioC] Creating a new instance of oligoSnpSet   Martin Morgan
• [BioC] U133 plus 2.0 probesets, what to keep and what to filter.   Daren Tan
• [BioC] Secure Account Update   Abbey National Plc.
• [BioC] human exon array 1.0ST, exonmap, exon.pmcdf troubles   Tobias Straub
• [BioC] Illumina annotation packages discrepancy   Renaud Gaujoux
• [BioC] snapCGH: "Error in segments(...   Radek Blatny
• [BioC] Fwd: snapCGH: "Error in segments(...   Radek Blatny
• [BioC] Genes and their associated GO terms and pathways   Wolfgang Huber
• [BioC] Does the strand of a microarray probe matter?   Wolfgang Huber
• [BioC] Out of date source code?   Wolfgang Huber
• [BioC] Help to submission   Wolfgang Huber
• [BioC] Mas5, normalization method, error   Wolfgang Huber
• [BioC] limma design question   Gordon K Smyth
• [BioC] Prokaryotic_Rhodobacter capsulatus GEP   dorothyc
• [BioC] Prokaryotic_Rhodobacter capsulatus GEP   Mark Robinson
• [BioC] Does the strand of a microarray probe matter?   Cei Abreu-Goodger
• [BioC] need telecommuniction package and database   Fatima-Zahra ELGHAZOULI
• [BioC] Code for reading Oxford Gene Technology (OGT) arrays using limma   michael watson (IAH-C)
• [BioC] Does the strand of a microarray probe matter?   Sean Davis
• [BioC] TilingArray Normalization   Anjan Purkayastha
• [BioC] Loading problem with Rlibstree and microRNA packages on Mac OS X 10.4   Luo Weijun
• [BioC] biomaRt getSequence through genomic position   Paul Hammer
• [BioC] Prokaryotic_Rhodobacter capsulatus GEP   Martin Morgan
• [BioC] Loading problem with Rlibstree and microRNA packages on MacOS X 10.4   Steven McKinney
• [BioC] hmCEU_YRI_chr22_Foundersfbat.ped file for GeneticsBase   Luis F
• [BioC] Bienvenue : -20% sur tout !   Sarenza via Meilleurmobile.com
• [BioC] TilingArray Normalization   Wolfgang Huber
• [BioC] biomaRt getSequence through genomic position   Wolfgang Huber
• [BioC] hmCEU_YRI_chr22_Foundersfbat.ped file for GeneticsBase   Tiago R Magalhães
• [BioC] Loading problem with Rlibstree and microRNA packages on MacOS X 10.4   Luo Weijun
• [BioC] Loading problem with Rlibstree and microRNA packages on MacOS X 10.4   Duncan Temple Lang
• [BioC] Moderated?   Atro Tossavainen
• [BioC] Loading problem with Rlibstree and microRNA packages on MacOS X 10.4   Luo Weijun
• [BioC] Custom CDF files   Edward Oakeley

Last message date: Sun Nov 30 22:07:00 CET 2008
Archived on: Mon Dec 1 19:27:15 CET 2008

• Messages sorted by: [ thread ] [ subject ] [ author ]
• More info on this list...