[BioC] Correct Filter Value for WormBase Gene in BioMart
Gundala Viswanath
gundalav at gmail.com
Sat Nov 15 16:29:11 CET 2008
Dear all,
What is the correct filter value for worm base genes like this:
"WBGene00002191"
"WBGene00022803"
"WBGene00001978"
I tried the following command, but it only gives NULL as value:
> library(biomaRt)
> mart <- useMart("ensembl")
> mart <-useDataset("celegans_gene_ensembl",mart)
> getBM(attributes=c("chromosome_name", "strand", "start_position", "end_position"), filters="wormpep_id",values="WBGene00022803", mart=mart)
NULL
Please kindly advice.
- Gundala Viswanath
Jakarta - Indonesia
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