[BioC] Finding Genomic Orthologs with biomaRt

Robert Gentleman rgentlem at fhcrc.org
Thu Nov 13 20:30:07 CET 2008


Hi Gundala,
  I don't know how to use biomaRt but you can use Inparanoid directly or the
hom.Hs.inp.db from within Bioconductor as one way to solve your problem.

  Robert


Gundala Viswanath wrote:
> Dear all,
> 
> Is there a way I can download the human versus all
> vertebrates orthologs using biomaRt?
> 
> 
> 
> - Gundala Viswanath
> Jakarta - Indonesia
> 
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-- 
Robert Gentleman, PhD
Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
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PO Box 19024
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rgentlem at fhcrc.org



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