April 2007 Archives by author

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Starting: Mon Apr 2 01:42:15 CEST 2007
Ending: Mon Apr 30 23:24:11 CEST 2007
Messages: 367

• [BioC] limma topTable values   john seers (IFR)
• [BioC] limma topTable values   john seers (IFR)
• [BioC] unable to load shared library   =?gb2312?q?=D1=EE=20=C5=F4=B3=CC?=
• [BioC] snapCGH question   Federico Abascal
• [BioC] CDF/Probe/Annotation for GNF1m custom chip   Cei Abreu-Goodger
• [BioC] CDF/Probe/Annotation for GNF1m custom chip   Cei Abreu-Goodger
• [BioC] Ranking genes according to tissue specificity   Cei Abreu-Goodger
• [BioC] Nested design in limma   Naomi Altman
• [BioC] limma: fold-changes corrected for dye-effect   Naomi Altman
• [BioC] dye effects stronger than dye-swaps?   Naomi Altman
• [BioC] hyperGTest   Naomi Altman
• [BioC] quality control for agilent microarray   James Anderson
• [BioC] silly question on how to use arrayMagic on agilent two-color arrays   James Anderson
• [BioC] log ratio or ratio to use in Agilent array?   James Anderson
• [BioC] Clustering data from chicken genome array and HGU95AV2   Timothy Au-Yeung
• [BioC] BRUCELLA 2 CHANNEL CUSTOM ARRAYS   Bandyopadhyay, Somnath (Som)
• [BioC] biomaRt, Error: ncol(result) == length(attributes) is not TRUE   Dick Beyer
• [BioC] biomaRt, Error: ncol(result) == length(attributes) is not TRUE   Dick Beyer
• [BioC] marray and limma error with lmFit   Hauchecorne Birger
• [BioC] GOstats: hyperGTest function   Edward Bolanger
• [BioC] Tiling array question, Agilent platform, multiple different chips.   Eugene Bolotin
• [BioC] ReadAffy gives Error   Ben Bolstad
• [BioC] read a CEL file?   Ben Bolstad
• [BioC] what is the best way to correlate SFP data to a phylogenetic correlation? (fwd)   Justin Borevitz
• [BioC] matrix row/column displayed as a list   Daniel Brewer
• [BioC] matrix row/column displayed as a list   Daniel Brewer
• [BioC] matrix row/column displayed as a list   Daniel Brewer
• [BioC] Correlation matrix and pca on matrix with NA values   Daniel Brewer
• [BioC] matrix row/column displayed as a list   Daniel Brewer
• [BioC] Biomart: Does it support IMAGE clone IDs   Daniel Brewer
• [BioC] Correlation matrix and pca on matrix with NA values   Daniel Brewer
• [BioC] Limma: All probes come out as significant   Daniel Brewer
• [BioC] Limma: All probes come out as significant   Daniel Brewer
• [BioC] Point plot against labels and reordering   Daniel Brewer
• [BioC] Point plot against labels and reordering   Daniel Brewer
• [BioC] Finding all combinations from groups   Daniel Brewer
• [BioC] ReadAffy gives Error   Boel Brynedal
• [BioC] ReadAffy gives Error   Boel Brynedal
• [BioC] ReadAffy gives Error   Boel Brynedal
• [BioC] affycomp package vs web version   Stefano Calza
• [BioC] Affymetrix Tiling arrays   Benilton Carvalho
• [BioC] Affymetrix Tiling arrays   Benilton Carvalho
• [BioC] read a CEL file?   Benilton Carvalho
• [BioC] Rgraphviz load problem   Tony Chiang
• [BioC] Fitting mixture of beta-distributions   Kevin R. Coombes
• [BioC] Correlation matrix and pca on matrix with NA values   Aedin Culhane
• [BioC] How can I combine rows from two different exprSet's into a new exprSet?   John Cumbers
• [BioC] Sampsizelibrary.R   Cuperlovic-Culf, Miroslava
• [BioC] lmfit zero genes fit model   Urska Cvek
• [BioC] limma topTable values   Sean Davis
• [BioC] biomaRt : multiple entrezgene ids to one affy id?   Sean Davis
• [BioC] matrix row/column displayed as a list   Sean Davis
• [BioC] probe expression profile to gene expression profile   Sean Davis
• [BioC] matrix row/column displayed as a list   Sean Davis
• [BioC] annotations for Codelink arrays   Sean Davis
• [BioC] matrix row/column displayed as a list   Sean Davis
• [BioC] steps to manually build AffyBatch object   Sean Davis
• [BioC] Help: convertion from an affymetrix probe to GO id   Sean Davis
• [BioC] duplicate correlation on Agilent 4x44 arrays   Sean Davis
• [BioC] Limma: All probes come out as significant   Sean Davis
• [BioC] Limma: All probes come out as significant   Sean Davis
• [BioC] getting hist(abatch) results for exprset   Sean Davis
• [BioC] BRUCELLA 2 CHANNEL CUSTOM ARRAYS   Sean Davis
• [BioC] annotation of hgu133a   Sean Davis
• [BioC] Tiling array question, Agilent platform, multiple different chips.   Sean Davis
• [BioC] snapCGH question   Sean Davis
• [BioC] Point plot against labels and reordering   Sean Davis
• [BioC] Point plot against labels and reordering   Sean Davis
• [BioC] annotation of hgu133a   Sean Davis
• [BioC] Point plot against labels and reordering   Sean Davis
• [BioC] Annotating HGU133plus2 genes with number of coding changes   Sean Davis
• [BioC] Gene orthologes lookup table   Sean Davis
• [BioC] [Bioc] Tcl/TK pckage "Bwidget"   Sean Davis
• [BioC] splitting a data frame   Sean Davis
• [BioC] Problems by installing getBioC()   Sean Davis
• [BioC] color scheme heatmap.2   Sean Davis
• [BioC] Normalisation for 2-set microarray   Sean Davis
• [BioC] silly question on how to use arrayMagic on agilent two-color arrays   Sean Davis
• [BioC] dye effects stronger than dye-swaps?   Sean Davis
• [BioC] dye effects stronger than dye-swaps?   Sean Davis
• [BioC] Limma: different numbers of duplicated spots   Jeremy Davis-Turak
• [BioC] "AveExp" column has dissappeared from limma topTable   Marcus Davy
• [BioC] snapCGH question   Ramon Diaz-Uriarte
• [BioC] annotations for Codelink arrays   Diego Diez
• [BioC] error in limma: normalizeForPrintorder   Erik Dopman
• [BioC] error in limma: normalizeForPrintorder   Erik Dopman
• [BioC] text.to.search problem in read.maimages   Erik Dopman
• [BioC] Filtering by variance, IQR, etc.   Jenny Drnevich
• [BioC] Can't get RCurl...   Jenny Drnevich
• [BioC] Can't get RCurl...   Jenny Drnevich
• [BioC] splitting a data frame   Jenny Drnevich
• [BioC] intended behavior of plotPCA and AffyBatch objects?   Jenny Drnevich
• [BioC] intended behavior of plotPCA and AffyBatch objects?   Jenny Drnevich
• [BioC] biocLite() fails to install all limma dependencies from CRAN   Jenny Drnevich
• [BioC] dye effects stronger than dye-swaps?   Jenny Drnevich
• [BioC] dye effects stronger than dye-swaps?   Jenny Drnevich
• [BioC] Bioconductor on a Rocks cluster   Patrick Durham
• [BioC] Bioconductor on a Rocks cluster   Patrick Durham
• [BioC] biomaRt : multiple entrezgene ids to one affy id?   Steffen Durinck
• [BioC] biomaRt : multiple entrezgene ids to one affy id?   Steffen Durinck
• [BioC] Aliases for gene names   Steffen Durinck
• [BioC] getHomolog in biomaRt   Steffen Durinck
• [BioC] Biomart: Does it support IMAGE clone IDs   Steffen Durinck
• [BioC] Annotating HGU133plus2 genes with number of coding changes   Steffen Durinck
• [BioC] biomaRt, Error: ncol(result) == length(attributes) is not TRUE   Steffen Durinck
• [BioC] Gene orthologes lookup table   Steffen Durinck
• [BioC] flowCore gate syntax   Byron Ellis
• [BioC] Duplicated spots in limmaGUI   João Fadista
• [BioC] mapGeneInfo (from marray) could not find function "widgetRender"   Seth Falcon
• [BioC] AveExp" column has dissappeared from limma topTable   Seth Falcon
• [BioC] matrix row/column displayed as a list   Seth Falcon
• [BioC] matrix row/column displayed as a list   Seth Falcon
• [BioC] matrix row/column displayed as a list   Seth Falcon
• [BioC] HyperGTest and genelists   Seth Falcon
• [BioC] Package "graph": bug in function addEdge   Seth Falcon
• [BioC] Limma error message   Seth Falcon
• [BioC] hyperGTest, KEGG   Seth Falcon
• [BioC] Rgraphviz load problem   Seth Falcon
• [BioC] Rgraphviz load problem   Seth Falcon
• [BioC] GOstats on cDNA microarray   Seth Falcon
• [BioC] Package "graph": bug in function addEdge   Seth Falcon
• [BioC] unable to load shared library   Seth Falcon
• [BioC] Bioconductor on a Rocks cluster   Seth Falcon
• [BioC] splitting a data frame   Seth Falcon
• [BioC] Problems by installing getBioC()   Seth Falcon
• [BioC] BioC 2.0 is available   Seth Falcon
• [BioC] Editing AnnBuilder function "getSrcUrl"   Seth Falcon
• [BioC] help for samr   Seth Falcon
• [BioC] biocLite() fails to install all limma dependencies from CRAN   Seth Falcon
• [BioC] Problems compiling RdbiPgSQL   Seth Falcon
• [BioC] Affymetrix Tiling arrays   Alessandro Ferrantini
• [BioC] Affymetrix Tiling arrays   Alessandro Ferrantini
• [BioC] QC in simpleaffy   Richard Finkers
• [BioC] Paired Samples & Two-Color arrays in limma   John Fowler
• [BioC] Suitability of normalizeBetweenArrays? - arrays with very different characteristics   John Fowler
• [BioC] Suitability of normalizeBetweenArrays? - arrays with very different characteristics   John Fowler
• [BioC] Limma error message   Richard Friedman
• [BioC] Point plot against labels and reordering   Robert Gentleman
• [BioC] homology package question   Robert Gentleman
• [BioC] two-color single channel preprocessing problems   Giulio Di Giovanni
• [BioC] Dup correlation in single-channel analysis?- technical rep   Heather de Glanville
• [BioC] Dup correlation in single-channel analysis?- technical rep   Heather de Glanville
• [BioC] working with prada objects   Florencio Gonzalez
• [BioC] working with prada objects   Florencio Gonzalez
• [BioC] working with prada objects   Florencio Gonzalez
• [BioC] read.SMD ... argument   Michael Gormley
• [BioC] ReadAffy gives Error   Kasper Daniel Hansen
• [BioC] CDF/Probe/Annotation for GNF1m custom chip   Kasper Daniel Hansen
• [BioC] CDF/Probe/Annotation for GNF1m custom chip   Kasper Daniel Hansen
• [BioC] read a CEL file?   Kasper Daniel Hansen
• [BioC] Rgraphviz load problem   Kasper Daniel Hansen
• [BioC] Rgraphviz load problem   Kasper Daniel Hansen
• [BioC] Nested design in limma   Kasper Daniel Hansen
• [BioC] Sampsizelibrary.R   Hassane, Duane
• [BioC] probe expression profile to gene expression profile   Christos Hatzis
• [BioC] Can't get RCurl...   Christos Hatzis
• [BioC] packages lumiHumanV1 and lumiHumanV2   Heim, Katharina
• [BioC] Accessing SD values from CEL files   Hooiveld, Guido
• [BioC] getting hist(abatch) results for exprset   Wolfgang Huber
• [BioC] ReadAffy gives Error   Gunther Höning
• [BioC] Aliases for gene names   Lakshmanan Iyer
• [BioC] KEGG pathways gene list   Srinivas Iyyer
• [BioC] [Bioc] Tcl/TK pckage "Bwidget"   Andris Jankevics
• [BioC] Limma - decideTests - separate/nestedF questions   Misha Kapushesky
• [BioC] STATISTICS COURSES at Imperial College London   Kells, Richard
• [BioC] Filtering by variance, IQR, etc.   Mark W Kimpel
• [BioC] Filtering by variance, IQR, etc.   Mark W Kimpel
• [BioC] GlobalAncova   Hans-Ulrich Klein
• [BioC] Rgraphviz load problem   Daniel Klevebring
• [BioC] Rgraphviz load problem   Daniel Klevebring
• [BioC] Rgraphviz load problem   Daniel Klevebring
• [BioC] Rgraphviz load problem   Daniel Klevebring
• [BioC] mapGeneInfo (from marray) could not find function "widgetRender"   Jay Konieczka
• [BioC] Package "graph": bug in function addEdge   Dirk Koschützki
• [BioC] Package "graph": bug in function addEdge   Dirk Koschützki
• [BioC] getting hist(abatch) results for exprset   Karin Lagesen
• [BioC] Problems in AnnBuilder package function ABPkgBuilder   Asta Laiho
• [BioC] Accessing SD values from CEL files   Hans van Leeuwen
• [BioC] ReadAffy(widget=TRUE) not working with R2.5?   Paul Leo
• [BioC] duplicate correlation on Agilent 4x44 arrays   Mitch Levesque
• [BioC] duplicate correlation on Agilent 4x44 arrays   Mitch Levesque
• [BioC] Failed to obtain KEGG organism code   Nianhua Li
• [BioC] Problems in AnnBuilder package function ABPkgBuilder   Nianhua Li
• [BioC] I need more precision about annotation of HGU133plus   Nianhua Li
• [BioC] hyperGTest, KEGG   Nianhua Li
• [BioC] homology package question   Nianhua Li
• [BioC] Annotation of U95av2 array   Nianhua Li
• [BioC] Editing AnnBuilder function "getSrcUrl"   Nianhua Li
• [BioC] Editing AnnBuilder function "getSrcUrl"   Nianhua Li
• [BioC] about source to make HGU133plus2 package   Nianhua Li
• [BioC] read a CEL file?   Simon Lin
• [BioC] Gene orthologes lookup table   Simon Lin
• [BioC] Help: convertion from an affymetrix probe to GO id   Weixiang Liu
• [BioC] homology package question   James MacDonald
• [BioC] Accessing SD values from CEL files   James W. MacDonald
• [BioC] Accessing SD values from CEL files   James W. MacDonald
• [BioC] ReadAffy gives Error   James W. MacDonald
• [BioC] qc and plasmodium anopheles chips   James W. MacDonald
• [BioC] lmfit zero genes fit model   James W. MacDonald
• [BioC] ReadAffy gives Error   James W. MacDonald
• [BioC] Can't get RCurl...   James W. MacDonald
• [BioC] BioConductor mailing list - BioC installation problem; OS- windows vista   James W. MacDonald
• [BioC] Help   James W. MacDonald
• [BioC] GOStats question   James W. MacDonald
• [BioC] CDF/Probe/Annotation for GNF1m custom chip   James W. MacDonald
• [BioC] HyperGTest and genelists   James W. MacDonald
• [BioC] error getting CDF   James W. MacDonald
• [BioC] CDF/Probe/Annotation for GNF1m custom chip   James W. MacDonald
• [BioC] Correlation matrix and pca on matrix with NA values   James W. MacDonald
• [BioC] GO IDs to Terms (in Globaltest)   James W. MacDonald
• [BioC] RMA error on exon arrays   James W. MacDonald
• [BioC] Annotation of U95av2 array   James W. MacDonald
• [BioC] Point plot against labels and reordering   James W. MacDonald
• [BioC] Annotation of U95av2 array   James W. MacDonald
• [BioC] Anopheles annotation using limma2biomaRt: error with fldfilt option   James W. MacDonald
• [BioC] homology package question   James W. MacDonald
• [BioC] Bioconductor courses   James W. MacDonald
• [BioC] error in limma: normalizeForPrintorder   James W. MacDonald
• [BioC] GOstats hyperGTest( ): Counts of EntrezIDs returned from summary() are not same as the numbers of EntrezIDs extracted from probeSetSummary()   James W. MacDonald
• [BioC] GOstats hyperGTest( ): Counts of EntrezIDs returned from summary() are not same as the numbers of EntrezIDs extracted from probeSetSummary()   James W. MacDonald
• [BioC] Title for a matplot   James W. MacDonald
• [BioC] Help with library(affy)   James W. MacDonald
• [BioC] splitting a data frame   James W. MacDonald
• [BioC] Problems by installing getBioC()   James W. MacDonald
• [BioC] intended behavior of plotPCA and AffyBatch objects?   James W. MacDonald
• [BioC] intended behavior of plotPCA and AffyBatch objects?   James W. MacDonald
• [BioC] biocLite() fails to install all limma dependencies from CRAN   James W. MacDonald
• [BioC] log ratio or ratio to use in Agilent array?   James W. MacDonald
• [BioC] hyperGTest   James W. MacDonald
• [BioC] Fitting mixture of beta-distributions   Claus Mayer
• [BioC] Fitting mixture of beta-distributions   Tapan Mehta
• [BioC] working with prada objects   Nolwenn Le Meur
• [BioC] "AveExp" column has dissappeared from limma topTable   Mikhail, Amy
• [BioC] AveExp" column has dissappeared from limma topTable   Mikhail, Amy
• [BioC] AveExp" column has dissappeared from limma topTable   Mikhail, Amy
• [BioC] QC in simpleaffy   Crispin Miller
• [BioC] Duplicated spots in limmaGUI   Wonjong Moon
• [BioC] ReadAffy(widget=TRUE) not working with R2.5?   Martin Morgan
• [BioC] How can I combine rows from two different exprSet's into a new exprSet?   Martin Morgan
• [BioC] Editing AnnBuilder function "getSrcUrl"   Dermot Morris
• [BioC] weights in fitLM   Street N.R.
• [BioC] GOstats hyperGTest( ): Counts of EntrezIDs returned from summary() are not same as the numbers of EntrezIDs extracted from probeSetSummary()   Na, Ren
• [BioC] GOstats hyperGTest( ): Counts of EntrezIDs returned from summary() are not same as the numbers of EntrezIDs extracted from probeSetSummary()   Na, Ren
• [BioC] GO IDs to Terms (in Globaltest)   Tarun Nayar
• [BioC] Inter-lab variability in Expression   Tarun Nayar
• [BioC] working with prada objects   Nolwenn
• [BioC] packages lumiHumanV1 and lumiHumanV2   Herve Pages
• [BioC] unable to load shared library   Herve Pages
• [BioC] marray and limma error with lmFit   Paquet, Agnes
• [BioC] Problem with customised endnode list in ontoCompare(goToolspackage)   Paquet, Agnes
• [BioC] dye effects stronger than dye-swaps?   Paquet, Agnes
• [BioC] getHomolog in biomaRt   Steve Pederson
• [BioC] getHomolog in biomaRt   Steve Pederson
• [BioC] HyperGTest and genelists   Francois Pepin
• [BioC] Limma error message   Francois Pepin
• [BioC] Bioconductor courses   Yannick Le Priol
• [BioC] Bioinformatic positions (students, post-docs) at the Medical University of Innsbruck, Austria   Johannes Rainer
• [BioC] Transcription factor binding site information   Johannes Rainer
• [BioC] Problem with customised endnode list in ontoCompare(goTools package)   Manasa Ramakrishna
• [BioC] Problem with customised endnode list in ontoCompare(goTools package)   Manasa Ramakrishna
• [BioC] Nimblegen data analysis   Todd Richmond
• [BioC] help for samr   Ruma Sanyal
• [BioC] [Bioc-devel] Tcl/TK pckage "Bwidget"   Keith Satterley
• [BioC] BioConductor mailing list - BioC installation problem; OS- windows vista   Uma Saxena
• [BioC] BioConductor mailing list - BioC installation problem; OS- windows vista   Uma Saxena
• [BioC] Aliases for gene names   Lana Schaffer
• [BioC] Help with intcor() function   Rob Scharpf
• [BioC] Problems by installing getBioC()   Schmitt, Corinna
• [BioC] limma question: direct two-color design & modeling individual subject effects   Paul Shannon
• [BioC] biomaRt : multiple entrezgene ids to one affy id?   Weiwei Shi
• [BioC] probe expression profile to gene expression profile   Weiwei Shi
• [BioC] probe expression profile to gene expression profile   Weiwei Shi
• [BioC] annotations for Codelink arrays   Weiwei Shi
• [BioC] annotations for Codelink arrays   Weiwei Shi
• [BioC] steps to manually build AffyBatch object   Weiwei Shi
• [BioC] steps to manually build AffyBatch object   Weiwei Shi
• [BioC] Help: convertion from an affymetrix probe to GO id   Weiwei Shi
• [BioC] Help: convertion from an affymetrix probe to GO id   Weiwei Shi
• [BioC] KEGG pathways gene list   Weiwei Shi
• [BioC] KEGG pathways gene list   Weiwei Shi
• [BioC] annotation of hgu133a   Weiwei Shi
• [BioC] unable to load shared library   Weiwei Shi
• [BioC] annotation of hgu133a   Weiwei Shi
• [BioC] is it a good idea not to consider low-intensity probesets in analysis?   Weiwei Shi
• [BioC] flowCore gate syntax   Leonardo Kenji Shikida
• [BioC] Problems compiling RdbiPgSQL   Albert Vernon Smith
• [BioC] Problem reading ArrayVision files   Gordon Smyth
• [BioC] duplicate correlation on Agilent 4x44 arrays   Gordon Smyth
• [BioC] paired design, LIMMA   Gordon Smyth
• [BioC] Suitability of normalizeBetweenArrays? - arrays with very different characteristics   Gordon Smyth
• [BioC] Suitability of normalizeBetweenArrays? - arrays with very different characteristics   Gordon Smyth
• [BioC] Suitability of normalizeBetweenArrays? - arrays with very different characteristics   Gordon Smyth
• [BioC] "AveExp" column has dissappeared from limma topTable   Gordon K Smyth
• [BioC] Dup correlation in single-channel analysis?- technical rep   Gordon K Smyth
• [BioC] AveExp" column has dissappeared from limma topTable   Gordon K Smyth
• [BioC] Problem reading ArrayVision files   Gordon K Smyth
• [BioC] AveExp" column has dissappeared from limma topTable   Gordon K Smyth
• [BioC] Limma: different numbers of duplicated spots   Gordon K Smyth
• [BioC] Unexpectedly high FDR using contrasts in Limma?   Gordon K Smyth
• [BioC] Unexpectedly high FDR using contrasts in Limma?   Gordon K Smyth
• [BioC] Limma - decideTests - separate/nestedF questions   Gordon K Smyth
• [BioC] duplicate correlation on Agilent 4x44 arrays   Gordon K Smyth
• [BioC] Duplicated spots in limmaGUI   Gordon K Smyth
• [BioC] marray and limma error with lmFit   Gordon K Smyth
• [BioC] weights in fitLM   Gordon K Smyth
• [BioC] paired design, LIMMA   Gordon K Smyth
• [BioC] biocLite() fails to install all limma dependencies from CRAN   Gordon K Smyth
• [BioC] paired design, LIMMA   Lev Soinov
• [BioC] paired design, LIMMA   Lev Soinov
• [BioC] paired design, LIMMA   Lev Soinov
• [BioC] Correlation matrix and pca on matrix with NA values   Wolfram Stacklies
• [BioC] qc and plasmodium anopheles chips   Mayte Suarez-Farinas
• [BioC] (no subject)   Mayte Suarez-Farinas
• [BioC] Anopheles annotation using limma2biomaRt: error with fldfilt option   Mayte Suarez-Farinas
• [BioC] I need more precision about annotation of HGU133plus   Ido M. Tamir
• [BioC] GOStats question   Tarca, Adi
• [BioC] Help with library(affy)   Tillinghast, Guy, M.D.
• [BioC] Finding all combinations from groups   Joern Toedling
• [BioC] Annotation of U95av2 array   Tseng, George C.
• [BioC] ReadAffy gives Error   Jarno Tuimala
• [BioC] how does lmFit uses the correlation value to transform replicates?   Artur Veloso
• [BioC] how does lmFit uses the correlation value to transform replicates?   Artur Veloso
• [BioC] color scheme heatmap.2   Roel Verhaak
• [BioC] error getting CDF   Yi Xing
• [BioC] mapGeneInfo (from marray) could not find function "widgetRender"   Jean Yee Hwa Yang
• [BioC] read.SMD ... argument   Jean Yee Hwa Yang
• [BioC] GO IDs to Terms (in Globaltest)   John Zhang
• [BioC] homology package question   John Zhang
• [BioC] Editing AnnBuilder function "getSrcUrl"   John Zhang
• [BioC] duplicate correlation on Agilent 4x44 arrays   Weiyin Zhou
• [BioC] limma read.maimages for scanarray express .csv files   sltucker at artsci.wustl.edu
• [BioC] what is the best way to correlate SFP data to a phylogenetic correlation?   lgilbert at berkeley.edu
• [BioC] Nested design in limma   caroline.truntzer at chu-lyon.fr
• [BioC] Unexpectedly high FDR using contrasts in Limma?   J.delasHeras at ed.ac.uk
• [BioC] Unexpectedly high FDR using contrasts in Limma?   J.delasHeras at ed.ac.uk
• [BioC] RBGL: bfs & dfs with directed graphs   stephen edwards
• [BioC] splitting a data frame   kfbargad at ehu.es
• [BioC] Title for a matplot   Dennis.Burian at faa.gov
• [BioC] Rgraphviz load problem   hpages at fhcrc.org
• [BioC] Help   simone gupta
• [BioC] Rgraphviz load problem   Li.Long at isb-sib.ch
• [BioC] Rgraphviz load problem   Li.Long at isb-sib.ch
• [BioC] Rgraphviz load problem   Li.Long at isb-sib.ch
• [BioC] TukeyHSD/posthoc comparisons   mara lawniczak
• [BioC] GOstats on cDNA microarray   tsoi at musc.edu
• [BioC] Suitability of normalizeBetweenArrays? - arrays with very different characteristics   martin.schumacher at novartis.com
• [BioC] Nimblegen data analysis   dhruv pant
• [BioC] RMA error on exon arrays   rcaloger
• [BioC] help for samr   ruma
• [BioC] limma: fold-changes corrected for dye-effect   karsten_hokamp at sfu.ca
• [BioC] HyperGTest and genelists   davidl at unr.nevada.edu
• [BioC] hyperGTest, KEGG   ivan.borozan at utoronto.ca
• [BioC] hyperGTest, KEGG   ivan.borozan at utoronto.ca
• [BioC] I need more precision about annotation of HGU133plus   gregory voisin
• [BioC] about source to make HGU133plus2 package   gregory voisin
• [BioC] Problem reading ArrayVision files   michael waisberg
• [BioC] Normalization across different tissues for Affymetrix Array   shirley zhang
• [BioC] Normalization across different tissues for Affymetrix Array   shirley zhang
• [BioC] homology package question   marco zucchelli
• [BioC] Annotating HGU133plus2 genes with number of coding changes   marco zucchelli
• [BioC] Annotating HGU133plus2 genes with number of coding changes   marco zucchelli
• [BioC] tip about the error in rowname in lumiR   Ingrid H. G. Østensen
• [BioC] Transcription factor binding site information   Ольга Камнева
• [BioC] Transcription factor binding site information   Ольга Камнева
• [BioC] Help with intcor() function   Ольга Камнева
• [BioC] Normalisation for 2-set microarray   Ольга Камнева
• [BioC] Normalisation for 2-set microarray   Ольга Камнева

Last message date: Mon Apr 30 23:24:11 CEST 2007
Archived on: Mon Apr 30 23:24:57 CEST 2007

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