January 2016 Archives by author

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Starting: Sat Jan 2 03:00:04 CET 2016
Ending: Fri Jan 29 23:56:12 CET 2016
Messages: 130

• [Bioc-devel] IRanges - PartitioningByEnd not found when package method runs.   Ben Ward (TGAC)
• [Bioc-devel] IRanges - PartitioningByEnd not found when package method runs.   Ben Ward (TGAC)
• [Bioc-devel] Rsamtools: How to import only the first 1000 or so reads   Christian Arnold
• [Bioc-devel] C library or C package API for regular expressions   Gabe Becker
• [Bioc-devel] Updating CausalR package after igraph fix   Glyn Bradley
• [Bioc-devel] Known Genes replaced by GENCODE genes at UCSC   Vincent Carey
• [Bioc-devel] Known Genes replaced by GENCODE genes at UCSC   Vincent Carey
• [Bioc-devel] Known Genes replaced by GENCODE genes at UCSC   Robert Castelo
• [Bioc-devel] Known Genes replaced by GENCODE genes at UCSC   Robert Castelo
• [Bioc-devel] Known Genes replaced by GENCODE genes at UCSC   Robert Castelo
• [Bioc-devel] seqlevelsStyle() warning-message by message-warning, and NCBI/Ensembl seq styles   Robert Castelo
• [Bioc-devel] seqlevelsStyle() warning-message by message-warning, and NCBI/Ensembl seq styles   Robert Castelo
• [Bioc-devel] Creating Biostrings DNAStringSet from Rcpp/C++   Sean Davis
• [Bioc-devel] C library or C package API for regular expressions   Charles Determan
• [Bioc-devel] fail to build a package after updating Bioconductor packages   Fan, Jean
• [Bioc-devel] Vignette building fails   Fan, Jean
• [Bioc-devel] Vignette building fails   Fan, Jean
• [Bioc-devel] Install devel version, dependancies missing   Laurent Gatto
• [Bioc-devel] Problem with constrained PSICQUIC queries   Laurent Gatto
• [Bioc-devel] mapIds methods for ExpressionSet and SummarizedExperiment   Ludwig Geistlinger
• [Bioc-devel] Announcing the EnrichmentBrowser 2.0   Ludwig Geistlinger
• [Bioc-devel] package citation and version is not updated   Ludwig Geistlinger
• [Bioc-devel] ncdf4 not installed on build machines   Stephanie M. Gogarten
• [Bioc-devel] Known Genes replaced by GENCODE genes at UCSC   Paul Grosu
• [Bioc-devel] Vignette building fails   Paul Grosu
• [Bioc-devel] Rsamtools/AnnotationHub Error for FaFile - multiple methods tables found for ‘relistToClass’   Kasper Daniel Hansen
• [Bioc-devel] Use of Matrix inside SummarizedExperiment   Peter Hickey
• [Bioc-devel] Use of Matrix inside SummarizedExperiment   Peter Hickey
• [Bioc-devel] C library or C package API for regular expressions   Jiří Hon
• [Bioc-devel] C library or C package API for regular expressions   Jiří Hon
• [Bioc-devel] C library or C package API for regular expressions   Jiří Hon
• [Bioc-devel] C library or C package API for regular expressions   Jiří Hon
• [Bioc-devel] C library or C package API for regular expressions   Jiří Hon
• [Bioc-devel] Update released version of Package   Wolfgang Huber
• [Bioc-devel] Common workflow to build an microarray annatation package, like hgu133a.db   Zhilong Jia
• [Bioc-devel] Common workflow to build an microarray annatation package, like hgu133a.db   Zhilong Jia
• [Bioc-devel] Use of EnsDb in the AnnotationDbi framework   Rainer Johannes
• [Bioc-devel] Problem with seqnames of TwoBitFile from AnnotationHub   Rainer Johannes
• [Bioc-devel] Problem with seqnames of TwoBitFile from AnnotationHub   Rainer Johannes
• [Bioc-devel] Problem with seqnames of TwoBitFile from AnnotationHub   Rainer Johannes
• [Bioc-devel] Problem with seqnames of TwoBitFile from AnnotationHub   Rainer Johannes
• [Bioc-devel] Known Genes replaced by GENCODE genes at UCSC   Rainer Johannes
• [Bioc-devel] GenomicFeatures::extractTranscriptSeqs setMethod suggestion   Rainer Johannes
• [Bioc-devel] GenomicFeatures::extractTranscriptSeqs setMethod suggestion   Rainer Johannes
• [Bioc-devel] Creating Biostrings DNAStringSet from Rcpp/C++   Michael Lawrence
• [Bioc-devel] Problem with seqnames of TwoBitFile from AnnotationHub   Michael Lawrence
• [Bioc-devel] Problem with seqnames of TwoBitFile from AnnotationHub   Michael Lawrence
• [Bioc-devel] Problem with seqnames of TwoBitFile from AnnotationHub   Michael Lawrence
• [Bioc-devel] Problem with seqnames of TwoBitFile from AnnotationHub   Michael Lawrence
• [Bioc-devel] IRanges - PartitioningByEnd not found when package method runs.   Michael Lawrence
• [Bioc-devel] Rsamtools: How to import only the first 1000 or so reads   Michael Lawrence
• [Bioc-devel] Rsamtools/AnnotationHub Error for FaFile - multiple methods tables found for ‘relistToClass’   Michael Love
• [Bioc-devel] Common workflow to build an microarray annatation package, like hgu133a.db   James W. MacDonald
• [Bioc-devel] Update released version of Package   Venkat Malladi
• [Bioc-devel] Update released version of Package   Venkat Malladi
• [Bioc-devel] Update released version of Package   Venkat Malladi
• [Bioc-devel] Build checks not representing updates to packages   Venkat Malladi
• [Bioc-devel] Doubts about version numbers and git-snv bridge   Alessandro Mammana
• [Bioc-devel] C library or C package API for regular expressions   Mike
• [Bioc-devel] bplapply Processes Sometimes Stall   Morgan, Martin
• [Bioc-devel] Updated package submission policies   Morgan, Martin
• [Bioc-devel] mapIds methods for ExpressionSet and SummarizedExperiment   Morgan, Martin
• [Bioc-devel] Rsamtools/AnnotationHub Error for FaFile - multiple methods tables found for ‘relistToClass’   Morgan, Martin
• [Bioc-devel] Problem with seqnames of TwoBitFile from AnnotationHub   Morgan, Martin
• [Bioc-devel] Bioconductor GSOC sponsorship?   Morgan, Martin
• [Bioc-devel] Use of EnsDb in the AnnotationDbi framework   Morgan, Martin
• [Bioc-devel] R / Bioconductor job opportunity: Senior Programmer / Analyst   Morgan, Martin
• [Bioc-devel] IRanges - PartitioningByEnd not found when package method runs.   Morgan, Martin
• [Bioc-devel] IRanges - PartitioningByEnd not found when package method runs.   Morgan, Martin
• [Bioc-devel] bplapply Processes Sometimes Stall   Morgan, Martin
• [Bioc-devel] Conference: BioC 2016: Where Software and Biology Connect, Stanford, 24-26 June   Morgan, Martin
• [Bioc-devel] Versioned (Biobase) "initialize" method   Morgan, Martin
• [Bioc-devel] bplapply Processes Sometimes Stall   Morgan, Martin
• [Bioc-devel] C library or C package API for regular expressions   Morgan, Martin
• [Bioc-devel] Vignette building fails   Morgan, Martin
• [Bioc-devel] Updating CausalR package after igraph fix   Obenchain, Valerie
• [Bioc-devel] Bioconductor Newsletter: January 2016   Obenchain, Valerie
• [Bioc-devel] Deprecation of cellHTS   Andrzej Oleś
• [Bioc-devel] Warnings on moscato2 SinglePackage Builder   Karen Oróstica
• [Bioc-devel] mcols<-() behaviour inheriting from Vector vs GRanges   Hervé Pagès
• [Bioc-devel] mcols<-() behaviour inheriting from Vector vs GRanges   Hervé Pagès
• [Bioc-devel] Creating Biostrings DNAStringSet from Rcpp/C++   Hervé Pagès
• [Bioc-devel] Problem with seqnames of TwoBitFile from AnnotationHub   Hervé Pagès
• [Bioc-devel] Problem with seqnames of TwoBitFile from AnnotationHub   Hervé Pagès
• [Bioc-devel] Problem with seqnames of TwoBitFile from AnnotationHub   Hervé Pagès
• [Bioc-devel] Known Genes replaced by GENCODE genes at UCSC   Hervé Pagès
• [Bioc-devel] Known Genes replaced by GENCODE genes at UCSC   Hervé Pagès
• [Bioc-devel] Known Genes replaced by GENCODE genes at UCSC   Hervé Pagès
• [Bioc-devel] IRanges - PartitioningByEnd not found when package method runs.   Hervé Pagès
• [Bioc-devel] IRanges - PartitioningByEnd not found when package method runs.   Hervé Pagès
• [Bioc-devel] GenomicFeatures::extractTranscriptSeqs setMethod suggestion   Hervé Pagès
• [Bioc-devel] C library or C package API for regular expressions   Hervé Pagès
• [Bioc-devel] seqlevelsStyle() warning-message by message-warning, and NCBI/Ensembl seq styles   Hervé Pagès
• [Bioc-devel] Use of Matrix inside SummarizedExperiment   Hervé Pagès
• [Bioc-devel] Warnings on moscato2 SinglePackage Builder   Thomas Lin Pedersen
• [Bioc-devel] mcols<-() behaviour inheriting from Vector vs GRanges   Malcolm Perry
• [Bioc-devel] mcols<-() behaviour inheriting from Vector vs GRanges   Malcolm Perry
• [Bioc-devel] possible BioGrid/psiquic bug [was Problem with constrained PSICQUIC queries]   Paul Shannon
• [Bioc-devel] Versioned (Biobase) "initialize" method   Stravs, Michael
• [Bioc-devel] bplapply Processes Sometimes Stall   Dario Strbenac
• [Bioc-devel] bplapply Processes Sometimes Stall   Dario Strbenac
• [Bioc-devel] bplapply Processes Sometimes Stall   Dario Strbenac
• [Bioc-devel] fail to build a package after updating Bioconductor packages   Yu Sun
• [Bioc-devel] fail to build a package after updating Bioconductor packages   Yu Sun
• [Bioc-devel] fail to build a package after updating Bioconductor packages   Ge Tan
• [Bioc-devel] Update released version of Package   Dan Tenenbaum
• [Bioc-devel] Update released version of Package   Dan Tenenbaum
• [Bioc-devel] Update released version of Package   Dan Tenenbaum
• [Bioc-devel] Build checks not representing updates to packages   Dan Tenenbaum
• [Bioc-devel] bioconductor.org scheduled downtime, Tuesday, January 19th, 3:00PM PST   Dan Tenenbaum
• [Bioc-devel] ncdf4 not installed on build machines   Dan Tenenbaum
• [Bioc-devel] Doubts about version numbers and git-snv bridge   Dan Tenenbaum
• [Bioc-devel] Fwd: Git-Svn bridge will be removed permanently on January 29, 2016   Dan Tenenbaum
• [Bioc-devel] C library or C package API for regular expressions   Dan Tenenbaum
• [Bioc-devel] package passes R CMD BUILD on Linux (Ubuntu) but not Windows Server 2008   Dan Tenenbaum
• [Bioc-devel] package passes R CMD BUILD on Linux (Ubuntu) but not Windows Server 2008   Dan Tenenbaum
• [Bioc-devel] Vignette building fails   Dan Tenenbaum
• [Bioc-devel] package citation and version is not updated   Dan Tenenbaum
• [Bioc-devel] question about citation file   Dan Tenenbaum
• [Bioc-devel] question about citation file   Dan Tenenbaum
• [Bioc-devel] package citation and version is not updated   Dan Tenenbaum
• [Bioc-devel] Common workflow to build an microarray annatation package, like hgu133a.db   Tim Triche, Jr.
• [Bioc-devel] Common workflow to build an microarray annatation package, like hgu133a.db   Tim Triche, Jr.
• [Bioc-devel] Problem with seqnames of TwoBitFile from AnnotationHub   Tim Triche, Jr.
• [Bioc-devel] Known Genes replaced by GENCODE genes at UCSC   Tim Triche, Jr.
• [Bioc-devel] Install devel version, dependancies missing   Samuel Wieczorek
• [Bioc-devel] topGO - BPontology Building most specific GOs ..... ontology: BP colnames Entry GO CC BP MF PE ( 2631 GO terms found. ) Build GO DAG topology .......... There are no adj nodes for node: GO:1904722   Witold E Wolski
• [Bioc-devel] package passes R CMD BUILD on Linux (Ubuntu) but not Windows Server 2008   Samuel E Zimmerman
• [Bioc-devel] package passes R CMD BUILD on Linux (Ubuntu) but not Windows Server 2008   Samuel E Zimmerman
• [Bioc-devel] question about citation file   Samuel E Zimmerman

Last message date: Fri Jan 29 23:56:12 CET 2016
Archived on: Fri Jan 29 23:56:29 CET 2016

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