[Bioc-devel] ncdf4 not installed on build machines

Dan Tenenbaum dtenenba at fredhutch.org
Thu Jan 14 00:14:43 CET 2016

Hi Stephanie,

ncdf4 did not install on zin2 because I needed to update netcdf. Thanks for reminding me this was necessary. 

On windows I believe the build system was installing ncdf4 from source and failing because it doesn't know where netcdf.h is located on moscato2. However a binary install of ncdf4 works, so I will ensure that that is what the build system does.


----- Original Message -----
> From: "Stephanie M. Gogarten" <sdmorris at u.washington.edu>
> To: "bioc-devel" <bioc-devel at r-project.org>
> Sent: Wednesday, January 13, 2016 2:26:38 PM
> Subject: [Bioc-devel] ncdf4 not installed on build machines

> How long does it usually take for a new package added to Imports to
> become available on the build machines? I updated GWASTools on January 4
> to depend on ncdf4 instead of ncdf, but the build report for 2/3
> machines still says "ncdf4 not available".
> thanks,
> Stephanie
> _______________________________________________
> Bioc-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel

More information about the Bioc-devel mailing list