August 2010 Archives by author

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Starting: Wed Aug 4 01:33:11 CEST 2010
Ending: Mon Aug 30 19:58:54 CEST 2010
Messages: 115

[Bioc-sig-seq] PairwiseAlignedXStringSet to PairwiseAlignedFixedSubject Patrick Aboyoun
[Bioc-sig-seq] Why are there non-imformative names() from GenomicFeatures:::exonsBy(...)? Patrick Aboyoun
[Bioc-sig-seq] PairwiseAlignedXStringSet to PairwiseAlignedFixedSubject Patrick Aboyoun
[Bioc-sig-seq] rtracklayer and import()ing into GRanges Patrick Aboyoun
[Bioc-sig-seq] Why are there non-imformative names() from GenomicFeatures:::exonsBy(...)? Patrick Aboyoun
[Bioc-sig-seq] Why are there non-imformative names() from GenomicFeatures:::exonsBy(...)? Patrick Aboyoun
[Bioc-sig-seq] rtracklayer and import()ing into GRanges Patrick Aboyoun
[Bioc-sig-seq] rtracklayer and import()ing into GRanges Patrick Aboyoun
[Bioc-sig-seq] rtracklayer and import()ing into GRanges Patrick Aboyoun
[Bioc-sig-seq] GRanges resize Behaviour Patrick Aboyoun
[Bioc-sig-seq] GRanges tabulate the coverage Patrick Aboyoun
[Bioc-sig-seq] GRanges tabulate the coverage Patrick Aboyoun
[Bioc-sig-seq] flank vs shift behaviour on GRanges objects Patrick Aboyoun
[Bioc-sig-seq] PairwiseAlignedXStringSet to PairwiseAlignedFixedSubject Stefan Bentink
[Bioc-sig-seq] PairwiseAlignedXStringSet to PairwiseAlignedFixedSubject Stefan Bentink
[Bioc-sig-seq] PairwiseAlignedXStringSet to PairwiseAlignedFixedSubject Stefan Bentink
[Bioc-sig-seq] Why are there non-imformative names() from GenomicFeatures:::exonsBy(...)? Marc Carlson
[Bioc-sig-seq] Counting mismatches with vmatchPattern Marcus Davy
[Bioc-sig-seq] Counting mismatches with vmatchPattern Marcus Davy
[Bioc-sig-seq] trimLRPatterns - adaptor trimming Marcus Davy
[Bioc-sig-seq] rtracklayer and import()ing into GRanges Ivan Gregoretti
[Bioc-sig-seq] rtracklayer and import()ing into GRanges Ivan Gregoretti
[Bioc-sig-seq] rtracklayer and import()ing into GRanges Ivan Gregoretti
[Bioc-sig-seq] rtracklayer and import()ing into GRanges Ivan Gregoretti
[Bioc-sig-seq] rtracklayer and import()ing into GRanges Ivan Gregoretti
[Bioc-sig-seq] rtracklayer and import()ing into GRanges Ivan Gregoretti
[Bioc-sig-seq] trimLRPatterns - adaptor trimming JASREET HUNDAL
[Bioc-sig-seq] trimLRPatterns - adaptor trimming JASREET HUNDAL
[Bioc-sig-seq] trimLRPatterns - adaptor trimming JASREET HUNDAL
[Bioc-sig-seq] trimLRPatterns - adaptor trimming JASREET HUNDAL
[Bioc-sig-seq] PairwiseAlignedXStringSet to PairwiseAlignedFixedSubject Kasper Daniel Hansen
[Bioc-sig-seq] overlaying coverage plots Wolfgang Huber
[Bioc-sig-seq] trimLRPatterns - adaptor trimming Harris A. Jaffee
[Bioc-sig-seq] finding the final nucleotide of trimmed reads Harris A. Jaffee
[Bioc-sig-seq] adding columns to values of GenomicRange objects Jiang, Lichun (NIH/NIDDK) [F]
[Bioc-sig-seq] adding columns to values of GenomicRange objects Jiang, Lichun (NIH/NIDDK) [F]
[Bioc-sig-seq] Problem compiling Rsamtools 1.0.7 Lapointe, David
[Bioc-sig-seq] Suggest enhancement in GRanges: add method setAs("Granges", "IntervalTree") Michael Lawrence
[Bioc-sig-seq] Suggest enhancement in GRanges: add method setAs("Granges", "IntervalTree") Michael Lawrence
[Bioc-sig-seq] rtracklayer and import()ing into GRanges Michael Lawrence
[Bioc-sig-seq] rtracklayer and import()ing into GRanges Michael Lawrence
[Bioc-sig-seq] rtracklayer and import()ing into GRanges Michael Lawrence
[Bioc-sig-seq] rtracklayer and import()ing into GRanges Michael Lawrence
[Bioc-sig-seq] rtracklayer - suppress track line Michael Lawrence
[Bioc-sig-seq] Converting SimpleRleViewsList to SimpleRleList Michael Lawrence
[Bioc-sig-seq] Implementing workflow.pdf (BioC2010 lab handout) Michael Lawrence
[Bioc-sig-seq] findOverlaps Documented Option Michael Lawrence
[Bioc-sig-seq] Why are there non-imformative names() from GenomicFeatures:::exonsBy(...)? Steve Lianoglou
[Bioc-sig-seq] Suggest enhancement in GRanges: add method setAs("Granges", "IntervalTree") Steve Lianoglou
[Bioc-sig-seq] Suggest enhancement in GRanges: add method setAs("Granges", "IntervalTree") Steve Lianoglou
[Bioc-sig-seq] Why are there non-imformative names() from GenomicFeatures:::exonsBy(...)? Steve Lianoglou
[Bioc-sig-seq] Why are there non-imformative names() from GenomicFeatures:::exonsBy(...)? Steve Lianoglou
[Bioc-sig-seq] Why are there non-imformative names() from GenomicFeatures:::exonsBy(...)? Steve Lianoglou
[Bioc-sig-seq] trimLRPatterns - adaptor trimming Steve Lianoglou
[Bioc-sig-seq] read length distribution from ShortReadQ or AlignedRead Steve Lianoglou
[Bioc-sig-seq] read length distribution from ShortReadQ or AlignedRead Steve Lianoglou
[Bioc-sig-seq] adding columns to values of GenomicRange objects Steve Lianoglou
[Bioc-sig-seq] finding the final nucleotide of trimmed reads Steve Lianoglou
[Bioc-sig-seq] readAligned error Steve Lianoglou
[Bioc-sig-seq] readAligned error Steve Lianoglou
[Bioc-sig-seq] readAligned error Steve Lianoglou
[Bioc-sig-seq] Problem compiling Rsamtools 1.0.7 Martin Morgan
[Bioc-sig-seq] overlaying coverage plots Martin Morgan
[Bioc-sig-seq] overlaying coverage plots Martin Morgan
[Bioc-sig-seq] trimLRPatterns - adaptor trimming Martin Morgan
[Bioc-sig-seq] coverage vectors and subseq Martin Morgan
[Bioc-sig-seq] trimLRPatterns - adaptor trimming Martin Morgan
[Bioc-sig-seq] trimLRPatterns - adaptor trimming Martin Morgan
[Bioc-sig-seq] coverage vectors and subseq Martin Morgan
[Bioc-sig-seq] read length distribution from ShortReadQ or AlignedRead Martin Morgan
[Bioc-sig-seq] read length distribution from ShortReadQ or AlignedRead Martin Morgan
[Bioc-sig-seq] findOverlaps Documented Option Martin Morgan
[Bioc-sig-seq] subsetting a DNAStringSet Martin Morgan
[Bioc-sig-seq] ShortRead qa() no longer working Martin Morgan
[Bioc-sig-seq] ShortRead qa() no longer working Martin Morgan
[Bioc-sig-seq] finding the final nucleotide of trimmed reads Martin Morgan
[Bioc-sig-seq] Bug when adding to a GRanges object using double brackets Martin Morgan
[Bioc-sig-seq] flank vs shift behaviour on GRanges objects Valerie Obenchain
[Bioc-sig-seq] Counting mismatches with vmatchPattern Hervé Pagès
[Bioc-sig-seq] Why are there non-imformative names() from GenomicFeatures:::exonsBy(...)? Hervé Pagès
[Bioc-sig-seq] Why are there non-imformative names() from GenomicFeatures:::exonsBy(...)? Hervé Pagès
[Bioc-sig-seq] Why are there non-imformative names() from GenomicFeatures:::exonsBy(...)? Hervé Pagès
[Bioc-sig-seq] finding the final nucleotide of trimmed reads Hervé Pagès
[Bioc-sig-seq] rtracklayer - suppress track line Chris Seidel
[Bioc-sig-seq] rtracklayer - suppress track line Chris Seidel
[Bioc-sig-seq] flank vs shift behaviour on GRanges objects Aaron Statham
[Bioc-sig-seq] flank vs shift behaviour on GRanges objects Aaron Statham
[Bioc-sig-seq] Bug when adding to a GRanges object using double brackets Aaron Statham
[Bioc-sig-seq] GRanges resize Behaviour Dario Strbenac
[Bioc-sig-seq] GRanges tabulate the coverage Dario Strbenac
[Bioc-sig-seq] findOverlaps minoverlap Dario Strbenac
[Bioc-sig-seq] findOverlaps Documented Option Dario Strbenac
[Bioc-sig-seq] ShortRead qa() no longer working Dario Strbenac
[Bioc-sig-seq] ShortRead qa() no longer working Dario Strbenac
[Bioc-sig-seq] finding the final nucleotide of trimmed reads Joern Toedling
[Bioc-sig-seq] Converting SimpleRleViewsList to SimpleRleList Johannes Waage
[Bioc-sig-seq] subsetting a DNAStringSet Andrew Yee
[Bioc-sig-seq] subsetting a DNAStringSet Andrew Yee
[Bioc-sig-seq] overlaying coverage plots LU Zen
[Bioc-sig-seq] overlaying coverage plots LU Zen
[Bioc-sig-seq] overlaying coverage plots LU Zen
[Bioc-sig-seq] finding the final nucleotide of trimmed reads joseph franklin
[Bioc-sig-seq] finding the final nucleotide of trimmed reads joseph franklin
[Bioc-sig-seq] Implementing workflow.pdf (BioC2010 lab handout) pterry at huskers.unl.edu
[Bioc-sig-seq] read length distribution from ShortReadQ or AlignedRead joseph
[Bioc-sig-seq] read length distribution from ShortReadQ or AlignedRead joseph
[Bioc-sig-seq] read length distribution from ShortReadQ or AlignedRead joseph
[Bioc-sig-seq] coverage vectors and subseq kirti prakash
[Bioc-sig-seq] coverage vectors and subseq kirti prakash
[Bioc-sig-seq] coverage vectors and subseq kirti prakash
[Bioc-sig-seq] coverage vectors and subseq kirti prakash
[Bioc-sig-seq] readAligned error kirti prakash
[Bioc-sig-seq] readAligned error kirti prakash
[Bioc-sig-seq] readAligned error kirti prakash
[Bioc-sig-seq] readAligned error kirti prakash

Last message date: Mon Aug 30 19:58:54 CEST 2010
Archived on: Mon Aug 30 19:59:03 CEST 2010

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