[BioC] standardized formats for RNAi screen datasets

[Wolfgang Huber]

Hi Rajarshi,

In addition to that...:

While not a 'standard' (whatever that means), the reports generated by 
cellHTS2 (which include a number of raw data and metadata files) is what 
I and some colleagues perceive as a 'reasonable' format for dataset 
exchange.

Note that 'data format' and 'minimal information about' are different 
things, one is an implementation, and one is conceptual.

	Best wishes
	Wolfgang

Laurent Gautier wrote:
> http://mibbi.sourceforge.net/projects/MIARE/
> 
> (I'd also recommend you to browse the MIBBI pages; lots of interesting
> thoughts there)
> 
> 
> L.
> 
> On Fri, 2009-08-14 at 10:09 -0400, Rajarshi Guha wrote:
>> Hi, this is not a statistical question, but I am looking for standards
>> governing exchange of RNAi screening datasets. I know that for DNA
>> microarrays, MIAME exists. Is there something comparable for RNAi screening
>> data?
>>
>> Thanks,
>>
> 
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