[BioC] Error with EBImage package loading

Kishor Tappita kishor.tappita at gmail.com
Thu Aug 6 18:30:51 CEST 2009


Dear Greg,

Sorry foe the delayed response. I installed the patch and that fixed
evrything. Thank you
so much for your help.


Regards,
Kishor

On Thu, Aug 6, 2009 at 2:35 PM, Gregoire Pau<gregoire.pau at embl.de> wrote:
> Dear Kishor,
>
>> I have not installed Microsoft C runtime library patch. Can you please
>> help me in installing that.
>
> Everything is in the installation guide:
> http://www.bioconductor.org/packages/release/bioc/vignettes/EBImage/inst/doc/EBImage-installation.pdf
>
> Please install this patch and reinstall ImageMagick with the box checked for
> headers and libraries. This should solve all your issues.
>
> Best regards,
>
> Greg
> ---
> Gregoire Pau
> EMBL Research Officer
> http://www.ebi.ac.uk/~gpau/
>
>
> Kishor Tappita wrote:
>>
>> Dear Greg,
>>
>> I have not installed Microsoft C runtime library patch. Can you please
>> help me in
>> installing that.
>>
>> gtk-demo works fine and I have set the path to 'c:\opt\gtk\bin' . But
>> while installing
>>  ImageMagick I used the default installation and am not sure whether I
>> checked the box for
>> hearders and libraries.
>>
>>
>> Thanks again for your help.
>>
>>
>> Regards,
>> Kishor
>> On Thu, Aug 6, 2009 at 2:18 PM, Gregoire Pau<gregoire.pau at embl.de> wrote:
>>>
>>> Dear Kishor,
>>>
>>>> I have installed GTK+ (C:\opt\gtk) and ImageMagick and have also
>>>> followed the instruction of EBImage intallation.
>>>
>>> As mentioned in the installation guide, did you install the Microsoft C
>>> runtime library patch in case of 'C runtime error exception' ? Did you
>>> set
>>> the PATH system environment to point to 'c:\opt\gtk\bin' ? During
>>> ImageMagick installation, did you check the box to install development
>>> headers and libraries ?
>>>
>>> Are GTK+ and ImageMagick working ? Did you try the command 'gtk-demo' in
>>> the
>>> Windows command line ? What is the result of 'convert' (coming from
>>> ImageMagick) in the command line ?
>>>
>>> EBImage works fine on Windows systems. Most of the installation issues
>>> come
>>> from the installation of ImageMagick.
>>>
>>> Regards,
>>>
>>> Greg
>>> ---
>>> Gregoire Pau
>>> EMBL Research Officer
>>> http://www.ebi.ac.uk/~gpau/
>>>
>>>
>>> Kishor Tappita wrote:
>>>>
>>>> Dear Greg,
>>>>
>>>> I have installed GTK+ (C:\opt\gtk) and ImageMagick and have also
>>>> followed
>>>> the instruction of EBImage intallation.
>>>>
>>>> I am having the same issue on two computers (my personal and work).
>>>>
>>>> Thanks,
>>>> Kishor
>>>>
>>>> On Thu, Aug 6, 2009 at 1:24 PM, Gregoire Pau <gregoire.pau at embl.de
>>>> <mailto:gregoire.pau at embl.de>> wrote:
>>>>
>>>>   Dear Kishor,
>>>>
>>>>   Do you have the libraries GTK+ and ImageMagick installed ?
>>>>   Did you follow the instructions to install EBImage ?
>>>>   http://www.bioconductor.org/packages/release/bioc/html/EBImage.html
>>>>
>>>>   Best regards,
>>>>
>>>>   Greg
>>>>   ---
>>>>   Gregoire Pau
>>>>   EMBL Research officer
>>>>   http://www.ebi.ac.uk/~gpau/ <http://www.ebi.ac.uk/%7Egpau/>
>>>>
>>>>
>>>>   Kishor Tappita wrote:
>>>>
>>>>       Dear All,
>>>>
>>>>       I was able to install EBImage but when I am trying to load the
>>>>       package I get
>>>>       the following error
>>>>
>>>>       R6034
>>>>        - C runtime library incorrectly...
>>>>
>>>>       Below is my session information.
>>>>
>>>>           sessionInfo()
>>>>
>>>>       R version 2.9.1 (2009-06-26)
>>>>       i386-pc-mingw32
>>>>
>>>>       locale:
>>>>       LC_COLLATE=English_United States.1252;LC_CTYPE=English_United
>>>>       States.1252;LC_MONETARY=English_United
>>>>       States.1252;LC_NUMERIC=C;LC_TIME=English_United States.1252
>>>>
>>>>       attached base packages:
>>>>       [1] stats     graphics  grDevices utils     datasets  methods
>>>> base
>>>>
>>>>       other attached packages:
>>>>       [1] EBImage_3.0.3 abind_1.1-0
>>>>
>>>>       loaded via a namespace (and not attached):
>>>>       [1] tools_2.9.1
>>>>
>>>>       Thanks,
>>>>       Kishor
>>>>
>>>>              [[alternative HTML version deleted]]
>>>>
>>>>       _______________________________________________
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>>>>
>>>>
>



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