[BioC] Error with EBImage package loading
Gregoire Pau
gregoire.pau at embl.de
Thu Aug 6 11:05:23 CEST 2009
Dear Kishor,
> I have not installed Microsoft C runtime library patch. Can you please
> help me in installing that.
Everything is in the installation guide:
http://www.bioconductor.org/packages/release/bioc/vignettes/EBImage/inst/doc/EBImage-installation.pdf
Please install this patch and reinstall ImageMagick with the box checked
for headers and libraries. This should solve all your issues.
Best regards,
Greg
---
Gregoire Pau
EMBL Research Officer
http://www.ebi.ac.uk/~gpau/
Kishor Tappita wrote:
> Dear Greg,
>
> I have not installed Microsoft C runtime library patch. Can you please
> help me in
> installing that.
>
> gtk-demo works fine and I have set the path to 'c:\opt\gtk\bin' . But
> while installing
> ImageMagick I used the default installation and am not sure whether I
> checked the box for
> hearders and libraries.
>
>
> Thanks again for your help.
>
>
> Regards,
> Kishor
> On Thu, Aug 6, 2009 at 2:18 PM, Gregoire Pau<gregoire.pau at embl.de> wrote:
>> Dear Kishor,
>>
>>> I have installed GTK+ (C:\opt\gtk) and ImageMagick and have also
>>> followed the instruction of EBImage intallation.
>> As mentioned in the installation guide, did you install the Microsoft C
>> runtime library patch in case of 'C runtime error exception' ? Did you set
>> the PATH system environment to point to 'c:\opt\gtk\bin' ? During
>> ImageMagick installation, did you check the box to install development
>> headers and libraries ?
>>
>> Are GTK+ and ImageMagick working ? Did you try the command 'gtk-demo' in the
>> Windows command line ? What is the result of 'convert' (coming from
>> ImageMagick) in the command line ?
>>
>> EBImage works fine on Windows systems. Most of the installation issues come
>> from the installation of ImageMagick.
>>
>> Regards,
>>
>> Greg
>> ---
>> Gregoire Pau
>> EMBL Research Officer
>> http://www.ebi.ac.uk/~gpau/
>>
>>
>> Kishor Tappita wrote:
>>> Dear Greg,
>>>
>>> I have installed GTK+ (C:\opt\gtk) and ImageMagick and have also followed
>>> the instruction of EBImage intallation.
>>>
>>> I am having the same issue on two computers (my personal and work).
>>>
>>> Thanks,
>>> Kishor
>>>
>>> On Thu, Aug 6, 2009 at 1:24 PM, Gregoire Pau <gregoire.pau at embl.de
>>> <mailto:gregoire.pau at embl.de>> wrote:
>>>
>>> Dear Kishor,
>>>
>>> Do you have the libraries GTK+ and ImageMagick installed ?
>>> Did you follow the instructions to install EBImage ?
>>> http://www.bioconductor.org/packages/release/bioc/html/EBImage.html
>>>
>>> Best regards,
>>>
>>> Greg
>>> ---
>>> Gregoire Pau
>>> EMBL Research officer
>>> http://www.ebi.ac.uk/~gpau/ <http://www.ebi.ac.uk/%7Egpau/>
>>>
>>>
>>> Kishor Tappita wrote:
>>>
>>> Dear All,
>>>
>>> I was able to install EBImage but when I am trying to load the
>>> package I get
>>> the following error
>>>
>>> R6034
>>> - C runtime library incorrectly...
>>>
>>> Below is my session information.
>>>
>>> sessionInfo()
>>>
>>> R version 2.9.1 (2009-06-26)
>>> i386-pc-mingw32
>>>
>>> locale:
>>> LC_COLLATE=English_United States.1252;LC_CTYPE=English_United
>>> States.1252;LC_MONETARY=English_United
>>> States.1252;LC_NUMERIC=C;LC_TIME=English_United States.1252
>>>
>>> attached base packages:
>>> [1] stats graphics grDevices utils datasets methods
>>> base
>>>
>>> other attached packages:
>>> [1] EBImage_3.0.3 abind_1.1-0
>>>
>>> loaded via a namespace (and not attached):
>>> [1] tools_2.9.1
>>>
>>> Thanks,
>>> Kishor
>>>
>>> [[alternative HTML version deleted]]
>>>
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