[BioC] Does this message means that I need to update R or BioC?

[Patrick Aboyoun]

Peng,
In addition to the versioning of R and Bioconductor packages, we also 
version the biocLite.R script on biocondunctor.org

"biocinstall version 2.4.11" because we sometimes change the behavior of the functions in that script, such as which BioC packages are recommended, so providing the printout that you gave is ideal for us to pinpoint problems users encounter.


Patrick


Sean Davis wrote:
> On Wed, Aug 5, 2009 at 12:14 PM, Peng Yu <pengyu.ut at gmail.com> wrote:
>
>   
>> Hi,
>>
>> I got the following message. I don't understand what it means. Can
>> somebody let me know its meaning?
>>
>>     
>>>     source("http://bioconductor.org/biocLite.R")
>>>     biocLite("pd.mogene.1.0.st.v1")
>>>       
>> Running biocinstall version 2.4.11 with R version 2.9.0
>> Your version of R requires version 2.4 of Bioconductor.
>>
>>     
>
> Version 2.4 is the current release of bioconductor.  biocLite() will do the
> right thing, generally.  What you want to try to avoid is mixing
> bioconductor versions together.  If you use biocLite() all the time, you
> shouldn't have any problems.
>
> Sean
>
> 	[[alternative HTML version deleted]]
>
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