[BioC] AnnBuilder problem

Yihuan Xu Yihuan.xu at jefferson.edu
Fri Aug 17 03:56:31 CEST 2007

Dear all,

I used AnnBuilder to annotate a customized mouse arrays. A folder 
'costommice' is generated. However I don't know how to use it. How can I 
install it in R? Can I use it as KEGG package?

Thank you.


Here is the code I used:

myBase <- "C:\\TJU\\Siracusa\\GSEA\\annotation"
myBaseType <-'gb'
mySrcUrls <- getSrcUrl("all", "Mus musculus")
myDir <- "C:\\TJU\\Siracusa\\annbuilder"
ABPkgBuilder(baseName = myBase, srcUrls = mySrcUrls, baseMapType =
myBaseType,  pkgName = "custommice",
pkgPath = myDir, organism = "Mus musculus", version = "1.1.0",
author = list(authors = "Yihuan Xu", maintainer =
"yihuan.xu at jefferson.edu"), fromWeb = TRUE)

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