[BioC] oligo package locked database question
Benilton Carvalho
bcarvalh at jhsph.edu
Tue Aug 7 07:22:48 CEST 2007
I wonder what the sessionInfo() is... and what exactly you used to
install the package so I can try to reproduce it here.
b
On Aug 6, 2007, at 9:00 PM, Tae-Hoon Chung wrote:
> Hi, All;
>
> I tried to install pd.mapping50k.hind240 package but got an error:
>
> * Installing *source* package 'pd.mapping50k.hind240' ...
> ** R
> ** inst
> ** preparing package for lazy loading
> Loading required package: RSQLite
> Loading required package: DBI
> Loading required package: oligo
> Loading required package: Biobase
> Loading required package: tools
>
> Welcome to Bioconductor
>
> Vignettes contain introductory material. To view, type
> 'openVignette()'. To cite Bioconductor, see
> 'citation("Biobase")' and for packages 'citation(pkgname)'.
>
> Loading required package: affyio
> Loading required package: splines
> Loading required package: BufferedMatrix
> Loading required package: BufferedMatrixMethods
> This is the oligo package
> Error in sqliteExecStatement(con, statement, bind.data) :
> RS-DBI driver: (error in statement: database is locked)
> Error: unable to load R code in package 'pd.mapping50k.hind240'
> Execution halted
> ERROR: lazy loading failed for package 'pd.mapping50k.hind240'
> ** Removing '/users04/tchung/Library/R64/pd.mapping50k.hind240'
>
> Anyone knows how to unlock the locked database?
>
> Tae-Hoon Chung
>
> Post-Doctoral Researcher
> Computational Biology Division, TGEN
> 445 N 5th St. Phoenix, AZ 85004 USA
> O: 1-602-343-8724
> F: 1-602-343-8840
>
>
>
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