[BioC] AnnBuilder doesn't work on gene information ("GENENAME", "SYMBOL", etc)
luo_weijun at yahoo.com
Mon Jul 17 05:20:52 CEST 2006
I downloaded 1.11.4. And it works well under R 2.3.1,
no compatibility issue. More important, I got the
relevant gene information data I need. Finally it
works! I have to say that I really appreciate you
guys' work to make and improve this nice package.
BTW, one more question, not urgent though, can I use
Refseq ID as my base file mapping currently, or will
this be considered in the future?
--- nli at fhcrc.org wrote:
> Hi, weijun,
> Now you can download either AnnBuilder 1.11.4 from
> AnnBuilder 1.10.4 from
> . Both have
> included John Zhang's patch, therefore should work
> for your case.
> thanks and good luck
> Quoting Luo Weijun <luo_weijun at yahoo.com>:
> > Thanks a lot,
> > I will wait till tomorrow to get the source code
> > bioconductor website, since the website at
> > https://hedgehog.fhcrc.org/ needs
> > And I agree there may be some backward
> > issues between AnnBuilder 1.11.x and R 2.3.x. (I
> > try it out tomorrow.) In that case, I can only use
> > AnnBuilder 1.10.x currently and in the near
> > since R 2.4.x is not released yet. Therefore, I am
> > looking forward to your results in checking
> > 1.10.x. Please keep me posted. Thanks.
> > Weijun
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