[BioC] attributes of SAM files

James W. MacDonald jmacdon at med.umich.edu
Wed Nov 2 14:08:12 CET 2005


Assa Yeroslaviz wrote:
> Hi,
> 
> Is there a way of extracting ONLY a list of the attributes of an output file
> from the siggenes package?
> 
> After doing a sam calculation:
> 
>>A.out <- sam(AE0627999.data, AE0627999.cl,
> 
> B=200,rand=123,gene.names=matrix_all_names[,2])
> 
> I wanted than to look at the attributes of the file:
> 
>>attributes(A.out)

Try

names(attributes(A.out))

Best,

Jim


> 
> 
> The List I've got is to long to be observed in my GUI window, so I would like to
> know, if there is a possibility to only see the titles of the attributes and not
> the whole list.
> 
> THX,
> 
> Assa
> 
> --
> Assa Yeroslaviz
> Lötzenerstr. 15
> 51373 Leverkusen
> 
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-- 
James W. MacDonald
Affymetrix and cDNA Microarray Core
University of Michigan Cancer Center
1500 E. Medical Center Drive
7410 CCGC
Ann Arbor MI 48109
734-647-5623



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